Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19g08
         (481 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011358-1|AAR96150.1|  169|Drosophila melanogaster RE70427p pro...   194   5e-50
AE014296-2782|AAN11738.1|  169|Drosophila melanogaster CG3948-PB...   194   5e-50
AE014296-2780|AAF49428.2|  174|Drosophila melanogaster CG3948-PA...   194   5e-50
AB037672-1|BAA90485.1|  174|Drosophila melanogaster nonclathrin ...   194   5e-50
AE014296-2781|AAN11737.1|  163|Drosophila melanogaster CG3948-PC...   187   8e-48
AE014298-2611|AAF48765.3| 1039|Drosophila melanogaster CG8146-PA...    28   7.6  

>BT011358-1|AAR96150.1|  169|Drosophila melanogaster RE70427p
           protein.
          Length = 169

 Score =  194 bits (473), Expect = 5e-50
 Identities = 86/115 (74%), Positives = 107/115 (93%)
 Frame = +1

Query: 136 IVKGMCILDYEGNRILAXYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVYK 315
           I+KGMCI+D +GNRILA YYDK++L T KEQKAFEKNLFNKTHR+N EIIMLDGLTCVYK
Sbjct: 8   IIKGMCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDGLTCVYK 67

Query: 316 SNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAF 480
           SNVDLFFYVMG+++ENELIL SVLN LY+S+SL+L++N+E+R+++ENL+ +MLAF
Sbjct: 68  SNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLVLENLEIIMLAF 122


>AE014296-2782|AAN11738.1|  169|Drosophila melanogaster CG3948-PB,
           isoform B protein.
          Length = 169

 Score =  194 bits (473), Expect = 5e-50
 Identities = 86/115 (74%), Positives = 107/115 (93%)
 Frame = +1

Query: 136 IVKGMCILDYEGNRILAXYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVYK 315
           I+KGMCI+D +GNRILA YYDK++L T KEQKAFEKNLFNKTHR+N EIIMLDGLTCVYK
Sbjct: 8   IIKGMCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDGLTCVYK 67

Query: 316 SNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAF 480
           SNVDLFFYVMG+++ENELIL SVLN LY+S+SL+L++N+E+R+++ENL+ +MLAF
Sbjct: 68  SNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLVLENLEIIMLAF 122


>AE014296-2780|AAF49428.2|  174|Drosophila melanogaster CG3948-PA,
           isoform A protein.
          Length = 174

 Score =  194 bits (473), Expect = 5e-50
 Identities = 86/115 (74%), Positives = 107/115 (93%)
 Frame = +1

Query: 136 IVKGMCILDYEGNRILAXYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVYK 315
           I+KGMCI+D +GNRILA YYDK++L T KEQKAFEKNLFNKTHR+N EIIMLDGLTCVYK
Sbjct: 8   IIKGMCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDGLTCVYK 67

Query: 316 SNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAF 480
           SNVDLFFYVMG+++ENELIL SVLN LY+S+SL+L++N+E+R+++ENL+ +MLAF
Sbjct: 68  SNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLVLENLEIIMLAF 122


>AB037672-1|BAA90485.1|  174|Drosophila melanogaster nonclathrin
           coat protein zeta-COP protein.
          Length = 174

 Score =  194 bits (473), Expect = 5e-50
 Identities = 86/115 (74%), Positives = 107/115 (93%)
 Frame = +1

Query: 136 IVKGMCILDYEGNRILAXYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVYK 315
           I+KGMCI+D +GNRILA YYDK++L T KEQKAFEKNLFNKTHR+N EIIMLDGLTCVYK
Sbjct: 8   IIKGMCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDGLTCVYK 67

Query: 316 SNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAF 480
           SNVDLFFYVMG+++ENELIL SVLN LY+S+SL+L++N+E+R+++ENL+ +MLAF
Sbjct: 68  SNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLVLENLEIIMLAF 122


>AE014296-2781|AAN11737.1|  163|Drosophila melanogaster CG3948-PC,
           isoform C protein.
          Length = 163

 Score =  187 bits (455), Expect = 8e-48
 Identities = 83/111 (74%), Positives = 103/111 (92%)
 Frame = +1

Query: 148 MCILDYEGNRILAXYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVYKSNVD 327
           MCI+D +GNRILA YYDK++L T KEQKAFEKNLFNKTHR+N EIIMLDGLTCVYKSNVD
Sbjct: 1   MCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDGLTCVYKSNVD 60

Query: 328 LFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAF 480
           LFFYVMG+++ENELIL SVLN LY+S+SL+L++N+E+R+++ENL+ +MLAF
Sbjct: 61  LFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLVLENLEIIMLAF 111


>AE014298-2611|AAF48765.3| 1039|Drosophila melanogaster CG8146-PA
           protein.
          Length = 1039

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = +3

Query: 81  PHNGSHNDGRFSVRTHIVHCQGDVHFGL*RKQNFGXILR*RRPTHN 218
           P    HN  +     H++H +    F L  KQ F  I R RR  H+
Sbjct: 702 PPTEHHNQHQPPNNKHVLHSEKKSQFTLNLKQRFCSIFRFRRSNHS 747


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,404,883
Number of Sequences: 53049
Number of extensions: 434331
Number of successful extensions: 758
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)