Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19f23
         (600 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase...    30   0.066
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          25   1.9  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    25   2.5  
L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier prot...    24   3.3  
L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier prot...    24   3.3  
AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...    24   3.3  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   5.7  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       23   10.0 

>AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase
           alternate isoform protein.
          Length = 257

 Score = 29.9 bits (64), Expect = 0.066
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = -3

Query: 352 TWCLLKTPSFLSTKCLYTFFINKACSCLSSAK*VN 248
           TW + KTP ++S+K L  F   +AC   SS K VN
Sbjct: 195 TWLVYKTPIYVSSKQLEAFRQLQACPKDSSKKIVN 229


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = -2

Query: 422 VAAERRLVDQIHICLIHNHCIEQYVVFVKNALVFKHQ 312
           + AERR++ ++  C+   H  +  V+++K   + KHQ
Sbjct: 177 IKAERRVLKELGFCVHVKHPHKLIVMYLKYLELEKHQ 213


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 13/55 (23%), Positives = 24/55 (43%)
 Frame = -2

Query: 482 TAERKNFENGRDKLFAIVNNVAAERRLVDQIHICLIHNHCIEQYVVFVKNALVFK 318
           TA  +  E   + L A + ++ A      QIH+C+     +E   +F+  +   K
Sbjct: 191 TARVRELEARLEALEAQLQSMRAREEFQQQIHVCMARKAWLEYEELFLLYSATLK 245


>L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +1

Query: 415 AATLLTIANSLSRPFSKFLRSAVKSLWPCPS 507
           A  + T +  +S PF    R  +   WPC S
Sbjct: 219 AQVVTTASGIISYPFDTVRRRMMMQSWPCKS 249


>L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +1

Query: 415 AATLLTIANSLSRPFSKFLRSAVKSLWPCPS 507
           A  + T +  +S PF    R  +   WPC S
Sbjct: 219 AQVVTTASGIISYPFDTVRRRMMMQSWPCKS 249


>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +3

Query: 465 IFTLSSKIVVA-VPVNWENDNLSVL 536
           I+ L   + VA V +NW  DNL ++
Sbjct: 314 IYALEGSVAVAGVAMNWLRDNLKII 338


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 361  SNNTWCLLKTPSFLSTKC 308
            S N W  L+  SFL+T C
Sbjct: 2313 SKNIWDALREKSFLTTDC 2330


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +1

Query: 118 RSCCICVR--RRPQRRCTLAPTRTPTSLLFISKILQNVLRTTN 240
           ++C  C+   RR +RR    P++     +F++++L  V  T N
Sbjct: 319 KTCVCCIESFRRRRRRDAFTPSKDDP--IFVNEMLHKVDLTVN 359


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,311
Number of Sequences: 2352
Number of extensions: 11942
Number of successful extensions: 28
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)