Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19f18
(606 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC103846-1|AAI03847.1| 127|Homo sapiens keratin associated prot... 33 0.59
BC103845-1|AAI03846.1| 127|Homo sapiens keratin associated prot... 33 0.59
AJ406942-1|CAC27581.1| 127|Homo sapiens keratin associated prot... 33 0.59
BC129990-1|AAI29991.1| 695|Homo sapiens nuclear fragile X menta... 33 0.78
BC108307-1|AAI08308.1| 695|Homo sapiens nuclear fragile X menta... 33 0.78
AY232289-1|AAP69984.1| 695|Homo sapiens proliferation-inducing ... 33 0.78
AJ493465-1|CAD38278.1| 695|Homo sapiens FMRP interacting protei... 33 0.78
AB037742-1|BAA92559.1| 714|Homo sapiens KIAA1321 protein protein. 33 0.78
AJ406936-1|CAC27575.1| 166|Homo sapiens keratin associated prot... 32 1.8
AJ296168-1|CAC27563.1| 106|Homo sapiens keratin associated prot... 31 3.1
BC130535-1|AAI30536.1| 867|Homo sapiens C18orf34 protein protein. 30 5.5
BC091517-1|AAH91517.1| 849|Homo sapiens C18orf34 protein protein. 30 5.5
AK126104-1|BAC86442.1| 988|Homo sapiens protein ( Homo sapiens ... 30 5.5
AJ406945-1|CAC27584.1| 193|Homo sapiens keratin associated prot... 30 5.5
BC113841-1|AAI13842.1| 678|Homo sapiens EPB41 protein protein. 30 7.3
BC024314-1|AAH24314.1| 814|Homo sapiens actin filament associat... 30 7.3
BC012151-1|AAH12151.1| 1120|Homo sapiens nuclear transcription f... 30 7.3
AL356472-6|CAH72746.1| 1120|Homo sapiens nuclear transcription f... 30 7.3
AL356472-5|CAH72745.1| 1024|Homo sapiens nuclear transcription f... 30 7.3
AL356218-4|CAI13305.1| 1120|Homo sapiens nuclear transcription f... 30 7.3
AL356218-3|CAI13304.1| 1024|Homo sapiens nuclear transcription f... 30 7.3
AL355302-1|CAI14968.1| 814|Homo sapiens actin filament associat... 30 7.3
AL133384-1|CAI40128.1| 814|Homo sapiens actin filament associat... 30 7.3
AK126038-1|BAC86407.1| 829|Homo sapiens protein ( Homo sapiens ... 30 7.3
AJ406937-1|CAC27576.1| 186|Homo sapiens keratin associated prot... 30 7.3
AF332009-1|AAK16545.1| 1024|Homo sapiens nuclear transcription f... 30 7.3
BC142985-1|AAI42986.1| 614|Homo sapiens C9orf52 protein protein. 29 9.6
BC042417-1|AAH42417.1| 650|Homo sapiens C9orf52 protein protein. 29 9.6
AY714129-1|AAU94938.1| 4186|Homo sapiens anchor protein protein. 29 9.6
AL591393-2|CAH71481.1| 616|Homo sapiens chromosome 9 open readi... 29 9.6
AK126089-1|BAC86432.1| 968|Homo sapiens protein ( Homo sapiens ... 29 9.6
AK091187-1|BAC03603.1| 616|Homo sapiens protein ( Homo sapiens ... 29 9.6
>BC103846-1|AAI03847.1| 127|Homo sapiens keratin associated protein
4-10 protein.
Length = 127
Score = 33.5 bits (73), Expect = 0.59
Identities = 26/84 (30%), Positives = 33/84 (39%)
Frame = -2
Query: 605 CCQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVFSNIC 426
CCQ CC V + R C +TT C T T R C +C +T + S+ C
Sbjct: 29 CCQTTCCCPSCVVSSCCRPSC---SQTTCCQT-TCCRPSCCRPVCCQTTCRPSCGVSSCC 84
Query: 425 NTRRILI*VLSRPPCTRPRSHRPL 354
R + RP C RPL
Sbjct: 85 --RPLCCQTTCRPSCGVSSCCRPL 106
>BC103845-1|AAI03846.1| 127|Homo sapiens keratin associated protein
4-10 protein.
Length = 127
Score = 33.5 bits (73), Expect = 0.59
Identities = 26/84 (30%), Positives = 33/84 (39%)
Frame = -2
Query: 605 CCQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVFSNIC 426
CCQ CC V + R C +TT C T T R C +C +T + S+ C
Sbjct: 29 CCQTTCCCPSCVVSSCCRPSC---SQTTCCQT-TCCRPSCCRPVCCQTTCRPSCGVSSCC 84
Query: 425 NTRRILI*VLSRPPCTRPRSHRPL 354
R + RP C RPL
Sbjct: 85 --RPLCCQTTCRPSCGVSSCCRPL 106
>AJ406942-1|CAC27581.1| 127|Homo sapiens keratin associated protein
4.10 protein.
Length = 127
Score = 33.5 bits (73), Expect = 0.59
Identities = 26/84 (30%), Positives = 33/84 (39%)
Frame = -2
Query: 605 CCQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVFSNIC 426
CCQ CC V + R C +TT C T T R C +C +T + S+ C
Sbjct: 29 CCQTTCCCPSCVVSSCCRPSC---SQTTCCQT-TCCRPSCCRPVCCQTTCRPSCGVSSCC 84
Query: 425 NTRRILI*VLSRPPCTRPRSHRPL 354
R + RP C RPL
Sbjct: 85 --RPLCCQTTCRPSCGVSSCCRPL 106
>BC129990-1|AAI29991.1| 695|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 2 protein.
Length = 695
Score = 33.1 bits (72), Expect = 0.78
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +2
Query: 95 NSNKIKADLIPDEND--PKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPF 268
N + K+D IP N N N + D+D + TTP+++ N+ K
Sbjct: 175 NQSVDKSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGC 234
Query: 269 ETLNIESDIIKTEQTDAP 322
E LNI D I ++T P
Sbjct: 235 ENLNIVQDKIMQQETSVP 252
>BC108307-1|AAI08308.1| 695|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 2 protein.
Length = 695
Score = 33.1 bits (72), Expect = 0.78
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +2
Query: 95 NSNKIKADLIPDEND--PKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPF 268
N + K+D IP N N N + D+D + TTP+++ N+ K
Sbjct: 175 NQSVDKSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGC 234
Query: 269 ETLNIESDIIKTEQTDAP 322
E LNI D I ++T P
Sbjct: 235 ENLNIVQDKIMQQETSVP 252
>AY232289-1|AAP69984.1| 695|Homo sapiens proliferation-inducing
gene 1 protein.
Length = 695
Score = 33.1 bits (72), Expect = 0.78
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +2
Query: 95 NSNKIKADLIPDEND--PKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPF 268
N + K+D IP N N N + D+D + TTP+++ N+ K
Sbjct: 175 NQSVDKSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGC 234
Query: 269 ETLNIESDIIKTEQTDAP 322
E LNI D I ++T P
Sbjct: 235 ENLNIVQDKIMQQETSVP 252
>AJ493465-1|CAD38278.1| 695|Homo sapiens FMRP interacting protein,
82kD protein.
Length = 695
Score = 33.1 bits (72), Expect = 0.78
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +2
Query: 95 NSNKIKADLIPDEND--PKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPF 268
N + K+D IP N N N + D+D + TTP+++ N+ K
Sbjct: 175 NQSVDKSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGC 234
Query: 269 ETLNIESDIIKTEQTDAP 322
E LNI D I ++T P
Sbjct: 235 ENLNIVQDKIMQQETSVP 252
>AB037742-1|BAA92559.1| 714|Homo sapiens KIAA1321 protein protein.
Length = 714
Score = 33.1 bits (72), Expect = 0.78
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +2
Query: 95 NSNKIKADLIPDEND--PKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPF 268
N + K+D IP N N N + D+D + TTP+++ N+ K
Sbjct: 194 NQSVDKSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGC 253
Query: 269 ETLNIESDIIKTEQTDAP 322
E LNI D I ++T P
Sbjct: 254 ENLNIVQDKIMQQETSVP 271
>AJ406936-1|CAC27575.1| 166|Homo sapiens keratin associated protein
4.4 protein.
Length = 166
Score = 31.9 bits (69), Expect = 1.8
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = -2
Query: 605 CCQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*R 465
CCQ CC V + R +CC +TT C T T R C S C R
Sbjct: 115 CCQPTCCCPSYCVSSCCRPQCC---QTTCCRT-TCCRPSCCVSRCYR 157
>AJ296168-1|CAC27563.1| 106|Homo sapiens keratin associated protein
protein.
Length = 106
Score = 31.1 bits (67), Expect = 3.1
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = -2
Query: 605 CCQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*R 465
CCQ CC V + R +CC +TT C T T R C S C R
Sbjct: 55 CCQPTCCCPSYCVSSCCRPQCC---QTTRCRT-TCCRPSCCVSRCYR 97
>BC130535-1|AAI30536.1| 867|Homo sapiens C18orf34 protein protein.
Length = 867
Score = 30.3 bits (65), Expect = 5.5
Identities = 37/170 (21%), Positives = 83/170 (48%), Gaps = 10/170 (5%)
Frame = +2
Query: 38 QFQSLINLLNLQATTIMSLNSN-KIKADLIPDE-NDPKNVTLRLNSVPEECTDDDNFSID 211
+ L +L + +++++++N+N + K + + + + K+ L+S+ + D
Sbjct: 343 EIYQLNSLFDHYSSSVINVNTNIEEKEEEVTEAIRETKSSKNELHSLSKMLEDLRRVYDQ 402
Query: 212 LPLTTPEQKDDFMNAIKPF----ETLNIE-SDIIKTEQTDAPATSGDDNNNRKV-VDANE 373
L ++ ++ A+ F +T +IE SD+ K + A + +N+K+ +D N+
Sbjct: 403 LTWKQKSHENQYLEAVNDFYAAKKTWDIELSDVAKDFSAISLACTKLTEDNKKLEIDINK 462
Query: 374 -DEYTVDGLKLKSKYVAYYKCLKILVDFLVMYVSKETNMKE-YEQVYTLG 517
E T + ++ KSKY + K L I M + + ++K Y++ Y +G
Sbjct: 463 ITEKTNESIRKKSKYESEIKYLTI------MKLKNDKHLKNIYKEAYRIG 506
>BC091517-1|AAH91517.1| 849|Homo sapiens C18orf34 protein protein.
Length = 849
Score = 30.3 bits (65), Expect = 5.5
Identities = 37/170 (21%), Positives = 83/170 (48%), Gaps = 10/170 (5%)
Frame = +2
Query: 38 QFQSLINLLNLQATTIMSLNSN-KIKADLIPDE-NDPKNVTLRLNSVPEECTDDDNFSID 211
+ L +L + +++++++N+N + K + + + + K+ L+S+ + D
Sbjct: 343 EIYQLNSLFDHYSSSVINVNTNIEEKEEEVTEAIRETKSSKNELHSLSKMLEDLRRVYDQ 402
Query: 212 LPLTTPEQKDDFMNAIKPF----ETLNIE-SDIIKTEQTDAPATSGDDNNNRKV-VDANE 373
L ++ ++ A+ F +T +IE SD+ K + A + +N+K+ +D N+
Sbjct: 403 LTWKQKSHENQYLEAVNDFYAAKKTWDIELSDVAKDFSAISLACTKLTEDNKKLEIDINK 462
Query: 374 -DEYTVDGLKLKSKYVAYYKCLKILVDFLVMYVSKETNMKE-YEQVYTLG 517
E T + ++ KSKY + K L I M + + ++K Y++ Y +G
Sbjct: 463 ITEKTNESIRKKSKYESEIKYLTI------MKLKNDKHLKNIYKEAYRIG 506
>AK126104-1|BAC86442.1| 988|Homo sapiens protein ( Homo sapiens
cDNA FLJ44116 fis, clone TESTI4046884. ).
Length = 988
Score = 30.3 bits (65), Expect = 5.5
Identities = 25/102 (24%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Frame = +2
Query: 8 IKMKI-NLCNIQFQSLINLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNSVPEE- 181
+KM I NL +IQ Q L+N L + + S+K +++ I + + +N+ LR++S +
Sbjct: 304 VKMPIENLSSIQ-QKLLNKKRLPKLQPLKMFSDKSESNTINFKENIQNILLRVHSFHSQL 362
Query: 182 CTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTE 307
T N D+ + D+ ++ ++P ++ +I+ +E
Sbjct: 363 LTYAVNIISDMLAVIKNKLDNEISQMEPSSISILKENIVASE 404
>AJ406945-1|CAC27584.1| 193|Homo sapiens keratin associated protein
4.15 protein.
Length = 193
Score = 30.3 bits (65), Expect = 5.5
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = -2
Query: 605 CCQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*R 465
CCQ CC P T R CC T C T R C S C R
Sbjct: 38 CCQ-SVCCQP----TCCRPSCCPSCCQTTCCRTTCCRPSCCVSSCCR 79
>BC113841-1|AAI13842.1| 678|Homo sapiens EPB41 protein protein.
Length = 678
Score = 29.9 bits (64), Expect = 7.3
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2
Query: 197 NFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTEQTDAPATSGD 337
NF +P P + D ++ PF TLNI I E TD SGD
Sbjct: 548 NFMESVPEPRPSEWDKRLSTHSPFRTLNINGQIPTGEGTD--DNSGD 592
>BC024314-1|AAH24314.1| 814|Homo sapiens actin filament associated
protein 1-like 2 protein.
Length = 814
Score = 29.9 bits (64), Expect = 7.3
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +2
Query: 158 RLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTEQTDA--PATS 331
+L + EEC +++ +DL L+ E KD+ A TL D E A PA++
Sbjct: 715 KLKEIDEECRGEESRRVDLELSIMEVKDNLKKAEAGPVTLGTTVDTTHLENPKAVTPASA 774
Query: 332 GD 337
D
Sbjct: 775 PD 776
>BC012151-1|AAH12151.1| 1120|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 1120
Score = 29.9 bits (64), Expect = 7.3
Identities = 22/79 (27%), Positives = 31/79 (39%)
Frame = -2
Query: 602 CQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVFSNICN 423
C C P T T ++ C K + C L I SC C TL + +C+
Sbjct: 786 CHSEEKCPPCTFLT--QKWCMGKHEFRSNIPCHLVDI-SCGLPCSATLPCGMHKCQRLCH 842
Query: 422 TRRILI*VLSRPPCTRPRS 366
L+ + PCT PR+
Sbjct: 843 KGECLVDEPCKQPCTTPRA 861
>AL356472-6|CAH72746.1| 1120|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 1120
Score = 29.9 bits (64), Expect = 7.3
Identities = 22/79 (27%), Positives = 31/79 (39%)
Frame = -2
Query: 602 CQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVFSNICN 423
C C P T T ++ C K + C L I SC C TL + +C+
Sbjct: 786 CHSEEKCPPCTFLT--QKWCMGKHEFRSNIPCHLVDI-SCGLPCSATLPCGMHKCQRLCH 842
Query: 422 TRRILI*VLSRPPCTRPRS 366
L+ + PCT PR+
Sbjct: 843 KGECLVDEPCKQPCTTPRA 861
>AL356472-5|CAH72745.1| 1024|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 1024
Score = 29.9 bits (64), Expect = 7.3
Identities = 22/79 (27%), Positives = 31/79 (39%)
Frame = -2
Query: 602 CQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVFSNICN 423
C C P T T ++ C K + C L I SC C TL + +C+
Sbjct: 786 CHSEEKCPPCTFLT--QKWCMGKHEFRSNIPCHLVDI-SCGLPCSATLPCGMHKCQRLCH 842
Query: 422 TRRILI*VLSRPPCTRPRS 366
L+ + PCT PR+
Sbjct: 843 KGECLVDEPCKQPCTTPRA 861
>AL356218-4|CAI13305.1| 1120|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 1120
Score = 29.9 bits (64), Expect = 7.3
Identities = 22/79 (27%), Positives = 31/79 (39%)
Frame = -2
Query: 602 CQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVFSNICN 423
C C P T T ++ C K + C L I SC C TL + +C+
Sbjct: 786 CHSEEKCPPCTFLT--QKWCMGKHEFRSNIPCHLVDI-SCGLPCSATLPCGMHKCQRLCH 842
Query: 422 TRRILI*VLSRPPCTRPRS 366
L+ + PCT PR+
Sbjct: 843 KGECLVDEPCKQPCTTPRA 861
>AL356218-3|CAI13304.1| 1024|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 1024
Score = 29.9 bits (64), Expect = 7.3
Identities = 22/79 (27%), Positives = 31/79 (39%)
Frame = -2
Query: 602 CQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVFSNICN 423
C C P T T ++ C K + C L I SC C TL + +C+
Sbjct: 786 CHSEEKCPPCTFLT--QKWCMGKHEFRSNIPCHLVDI-SCGLPCSATLPCGMHKCQRLCH 842
Query: 422 TRRILI*VLSRPPCTRPRS 366
L+ + PCT PR+
Sbjct: 843 KGECLVDEPCKQPCTTPRA 861
>AL355302-1|CAI14968.1| 814|Homo sapiens actin filament associated
protein 1-like 2 protein.
Length = 814
Score = 29.9 bits (64), Expect = 7.3
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +2
Query: 158 RLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTEQTDA--PATS 331
+L + EEC +++ +DL L+ E KD+ A TL D E A PA++
Sbjct: 715 KLKEIDEECRGEESRRVDLELSIMEVKDNLKKAEAGPVTLGTTVDTTHLENPKAVTPASA 774
Query: 332 GD 337
D
Sbjct: 775 PD 776
>AL133384-1|CAI40128.1| 814|Homo sapiens actin filament associated
protein 1-like 2 protein.
Length = 814
Score = 29.9 bits (64), Expect = 7.3
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +2
Query: 158 RLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTEQTDA--PATS 331
+L + EEC +++ +DL L+ E KD+ A TL D E A PA++
Sbjct: 715 KLKEIDEECRGEESRRVDLELSIMEVKDNLKKAEAGPVTLGTTVDTTHLENPKAVTPASA 774
Query: 332 GD 337
D
Sbjct: 775 PD 776
>AK126038-1|BAC86407.1| 829|Homo sapiens protein ( Homo sapiens
cDNA FLJ44050 fis, clone TESTI4032895. ).
Length = 829
Score = 29.9 bits (64), Expect = 7.3
Identities = 36/170 (21%), Positives = 82/170 (48%), Gaps = 10/170 (5%)
Frame = +2
Query: 38 QFQSLINLLNLQATTIMSLNSN--KIKADLIPDENDPKNVTLRLNSVPEECTDDDNFSID 211
+ L +L + +++++++N+N + + ++ + K+ L+S+ + D
Sbjct: 343 EIYQLNSLFDHYSSSVINVNTNIEEEEEEVTEAIRETKSSKNELHSLSKMLEDLRRVYDQ 402
Query: 212 LPLTTPEQKDDFMNAIKPF----ETLNIE-SDIIKTEQTDAPATSGDDNNNRKV-VDANE 373
L ++ ++ A+ F +T +IE SD+ K + A + +N+K+ +D N+
Sbjct: 403 LTWKQKSHENQYLEAVNDFYAAKKTWDIELSDVAKDFSAISLACTKLTEDNKKLEIDINK 462
Query: 374 -DEYTVDGLKLKSKYVAYYKCLKILVDFLVMYVSKETNMKE-YEQVYTLG 517
E T + ++ KSKY + K L I M + + ++K Y++ Y +G
Sbjct: 463 ITEKTNESIRKKSKYESEIKYLTI------MKLKNDKHLKNIYKEAYRIG 506
>AJ406937-1|CAC27576.1| 186|Homo sapiens keratin associated protein
4.5 protein.
Length = 186
Score = 29.9 bits (64), Expect = 7.3
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = -2
Query: 605 CCQIRACCVPATV*TARRQKCCAKP---RTTVCLTCTLARILSCWSLC 471
CC I +CC P ++ + CC +P +TT C T C S C
Sbjct: 60 CC-ISSCCRPYCCESSCCRPCCCRPSCCQTTCCRTTCCRTTCCCPSCC 106
Score = 29.5 bits (63), Expect = 9.6
Identities = 21/78 (26%), Positives = 26/78 (33%)
Frame = -2
Query: 605 CCQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVFSNIC 426
CC+ CC V + R +CC +VC T R C S C C
Sbjct: 95 CCRTTCCCPSCCVSSCCRPQCC----QSVCCQPTCCRPSYCISSCCHPSCCESSCCRPCC 150
Query: 425 NTRRILI*VLSRPPCTRP 372
R + V C RP
Sbjct: 151 CVRPVCGRVSCHTTCYRP 168
>AF332009-1|AAK16545.1| 1024|Homo sapiens nuclear transcription factor
NFX2 protein.
Length = 1024
Score = 29.9 bits (64), Expect = 7.3
Identities = 22/79 (27%), Positives = 31/79 (39%)
Frame = -2
Query: 602 CQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVFSNICN 423
C C P T T ++ C K + C L I SC C TL + +C+
Sbjct: 786 CHSEEKCPPCTFLT--QKWCMGKHEFRSNIPCHLVDI-SCGLPCSATLPCGMHKCQRLCH 842
Query: 422 TRRILI*VLSRPPCTRPRS 366
L+ + PCT PR+
Sbjct: 843 KGECLVDEPCKQPCTTPRA 861
>BC142985-1|AAI42986.1| 614|Homo sapiens C9orf52 protein protein.
Length = 614
Score = 29.5 bits (63), Expect = 9.6
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +2
Query: 356 VVDANEDEYTVDGLKLKSKYVAYYKCLKILVDFLVMYVSKETNMKEYEQVYTLGRQLYEV 535
V D N + GLK+++ Y Y +CL IL + + +E E+E LG + +
Sbjct: 184 VQDENMINFIKGGLKIRTSYQIYKECLSILHEIQKNKLQQEF-FYEFEGGVKLGSGAFNL 242
Query: 536 LRSI 547
+ S+
Sbjct: 243 MLSL 246
>BC042417-1|AAH42417.1| 650|Homo sapiens C9orf52 protein protein.
Length = 650
Score = 29.5 bits (63), Expect = 9.6
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +2
Query: 356 VVDANEDEYTVDGLKLKSKYVAYYKCLKILVDFLVMYVSKETNMKEYEQVYTLGRQLYEV 535
V D N + GLK+++ Y Y +CL IL + + +E E+E LG + +
Sbjct: 220 VQDENMINFIKGGLKIRTSYQIYKECLSILHEIQKNKLQQEF-FYEFEGGVKLGSGAFNL 278
Query: 536 LRSI 547
+ S+
Sbjct: 279 MLSL 282
>AY714129-1|AAU94938.1| 4186|Homo sapiens anchor protein protein.
Length = 4186
Score = 29.5 bits (63), Expect = 9.6
Identities = 25/117 (21%), Positives = 52/117 (44%)
Frame = -1
Query: 522 CLPNVYTCSYSFMLVSLLTYITKKSTSIFKHL*YATYFDLSFKPSTVYSSSFASTTFRLL 343
CL ++ + F + + Y+ + + L +FD S +++S + TF L
Sbjct: 4071 CLKSLKNIFHDFREIEVEVYMAACHSPVVSQLEAGHFFDASITKKHLFASVHDAVTFALQ 4130
Query: 342 LSSPLVAGASVCSVLIISDSIFKVSKGLMAFIKSSFCSGVVNGKSIEKLSSSVHSSG 172
P V + V L +S + ++ L+ ++++ SG+ EK+ SV ++G
Sbjct: 4131 HPRP-VPDSPVSPSLAVSSDVKQLEPELL--LRNNLLSGIP-----EKVQGSVGANG 4179
>AL591393-2|CAH71481.1| 616|Homo sapiens chromosome 9 open reading
frame 52 protein.
Length = 616
Score = 29.5 bits (63), Expect = 9.6
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +2
Query: 356 VVDANEDEYTVDGLKLKSKYVAYYKCLKILVDFLVMYVSKETNMKEYEQVYTLGRQLYEV 535
V D N + GLK+++ Y Y +CL IL + + +E E+E LG + +
Sbjct: 186 VQDENMINFIKGGLKIRTSYQIYKECLSILHEIQKNKLQQEF-FYEFEGGVKLGSGAFNL 244
Query: 536 LRSI 547
+ S+
Sbjct: 245 MLSL 248
>AK126089-1|BAC86432.1| 968|Homo sapiens protein ( Homo sapiens
cDNA FLJ44101 fis, clone TESTI4043947. ).
Length = 968
Score = 29.5 bits (63), Expect = 9.6
Identities = 25/102 (24%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Frame = +2
Query: 8 IKMKI-NLCNIQFQSLINLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNSVPEE- 181
+KM I NL +IQ Q L+N L + + S+K +++ I + + +N+ LR++S +
Sbjct: 522 VKMPIENLSSIQ-QKLLNKKMLPKLQPLKMFSDKSESNTINFKENIQNILLRVHSFHSQL 580
Query: 182 CTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTE 307
T N D+ + D+ ++ ++P ++ +I+ +E
Sbjct: 581 LTYAVNIISDMLAVIKNKLDNEISQMEPSSISILKENIVASE 622
>AK091187-1|BAC03603.1| 616|Homo sapiens protein ( Homo sapiens
cDNA FLJ33868 fis, clone CTONG2006611, moderately
similar to Homo sapiens DEME-6 mRNA. ).
Length = 616
Score = 29.5 bits (63), Expect = 9.6
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +2
Query: 356 VVDANEDEYTVDGLKLKSKYVAYYKCLKILVDFLVMYVSKETNMKEYEQVYTLGRQLYEV 535
V D N + GLK+++ Y Y +CL IL + + +E E+E LG + +
Sbjct: 186 VQDENMINFIKGGLKIRTSYQIYKECLSILHEIQKNKLQQEF-FYEFEGGVKLGSGAFNL 244
Query: 536 LRSI 547
+ S+
Sbjct: 245 MLSL 248
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,946,004
Number of Sequences: 237096
Number of extensions: 1549971
Number of successful extensions: 13354
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 12977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13327
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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