Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19f17
         (511 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030456-1|ABP87898.1|  107|Drosophila melanogaster RH04958p pro...   200   1e-51
AY060738-1|AAL28286.1|  107|Drosophila melanogaster GH18886p pro...   200   1e-51
AE013599-3913|AAF47236.1|  107|Drosophila melanogaster CG4692-PB...   200   1e-51
AE013599-3912|AAM68322.1|  107|Drosophila melanogaster CG4692-PA...   200   1e-51
BT025808-1|ABF85708.1|  135|Drosophila melanogaster IP01747p pro...   192   3e-49
BT003541-1|AAO39545.1|  492|Drosophila melanogaster RE05264p pro...    30   1.6  
AE014134-1847|AAF52919.1|  572|Drosophila melanogaster CG5022-PA...    30   1.6  

>BT030456-1|ABP87898.1|  107|Drosophila melanogaster RH04958p
           protein.
          Length = 107

 Score =  200 bits (487), Expect = 1e-51
 Identities = 81/107 (75%), Positives = 92/107 (85%)
 Frame = +1

Query: 85  MAFGDYPKEYNPAVHGPYDPARYYGKPDTPFSQLKLNEIGSWFGRRSKTPSAVAGAFSRA 264
           MAFGDYP EYNP VHGPYDPAR+YGK D PF Q+KL EIG+W GRR+KTP+AVAGA SRA
Sbjct: 1   MAFGDYPAEYNPKVHGPYDPARFYGKADVPFGQVKLGEIGAWLGRRNKTPNAVAGAVSRA 60

Query: 265 WWRWQHKYVQPKKVGMAPFYQLLVGSMVFFYAINYGRIKHHKNYKYH 405
           WWRWQHKYV PK+ G+APF+QL V SM FFY INY ++KHH+NYKYH
Sbjct: 61  WWRWQHKYVFPKRAGIAPFFQLTVASMTFFYLINYTKLKHHRNYKYH 107


>AY060738-1|AAL28286.1|  107|Drosophila melanogaster GH18886p
           protein.
          Length = 107

 Score =  200 bits (487), Expect = 1e-51
 Identities = 81/107 (75%), Positives = 92/107 (85%)
 Frame = +1

Query: 85  MAFGDYPKEYNPAVHGPYDPARYYGKPDTPFSQLKLNEIGSWFGRRSKTPSAVAGAFSRA 264
           MAFGDYP EYNP VHGPYDPAR+YGK D PF Q+KL EIG+W GRR+KTP+AVAGA SRA
Sbjct: 1   MAFGDYPAEYNPKVHGPYDPARFYGKADVPFGQVKLGEIGAWLGRRNKTPNAVAGAVSRA 60

Query: 265 WWRWQHKYVQPKKVGMAPFYQLLVGSMVFFYAINYGRIKHHKNYKYH 405
           WWRWQHKYV PK+ G+APF+QL V SM FFY INY ++KHH+NYKYH
Sbjct: 61  WWRWQHKYVFPKRAGIAPFFQLTVASMTFFYLINYTKLKHHRNYKYH 107


>AE013599-3913|AAF47236.1|  107|Drosophila melanogaster CG4692-PB,
           isoform B protein.
          Length = 107

 Score =  200 bits (487), Expect = 1e-51
 Identities = 81/107 (75%), Positives = 92/107 (85%)
 Frame = +1

Query: 85  MAFGDYPKEYNPAVHGPYDPARYYGKPDTPFSQLKLNEIGSWFGRRSKTPSAVAGAFSRA 264
           MAFGDYP EYNP VHGPYDPAR+YGK D PF Q+KL EIG+W GRR+KTP+AVAGA SRA
Sbjct: 1   MAFGDYPAEYNPKVHGPYDPARFYGKADVPFGQVKLGEIGAWLGRRNKTPNAVAGAVSRA 60

Query: 265 WWRWQHKYVQPKKVGMAPFYQLLVGSMVFFYAINYGRIKHHKNYKYH 405
           WWRWQHKYV PK+ G+APF+QL V SM FFY INY ++KHH+NYKYH
Sbjct: 61  WWRWQHKYVFPKRAGIAPFFQLTVASMTFFYLINYTKLKHHRNYKYH 107


>AE013599-3912|AAM68322.1|  107|Drosophila melanogaster CG4692-PA,
           isoform A protein.
          Length = 107

 Score =  200 bits (487), Expect = 1e-51
 Identities = 81/107 (75%), Positives = 92/107 (85%)
 Frame = +1

Query: 85  MAFGDYPKEYNPAVHGPYDPARYYGKPDTPFSQLKLNEIGSWFGRRSKTPSAVAGAFSRA 264
           MAFGDYP EYNP VHGPYDPAR+YGK D PF Q+KL EIG+W GRR+KTP+AVAGA SRA
Sbjct: 1   MAFGDYPAEYNPKVHGPYDPARFYGKADVPFGQVKLGEIGAWLGRRNKTPNAVAGAVSRA 60

Query: 265 WWRWQHKYVQPKKVGMAPFYQLLVGSMVFFYAINYGRIKHHKNYKYH 405
           WWRWQHKYV PK+ G+APF+QL V SM FFY INY ++KHH+NYKYH
Sbjct: 61  WWRWQHKYVFPKRAGIAPFFQLTVASMTFFYLINYTKLKHHRNYKYH 107


>BT025808-1|ABF85708.1|  135|Drosophila melanogaster IP01747p
           protein.
          Length = 135

 Score =  192 bits (467), Expect = 3e-49
 Identities = 78/104 (75%), Positives = 89/104 (85%)
 Frame = +1

Query: 85  MAFGDYPKEYNPAVHGPYDPARYYGKPDTPFSQLKLNEIGSWFGRRSKTPSAVAGAFSRA 264
           MAFGDYP EYNP VHGPYDPAR+YGK D PF Q+KL EIG+W GRR+KTP+AVAGA SRA
Sbjct: 2   MAFGDYPAEYNPKVHGPYDPARFYGKADVPFGQVKLGEIGAWLGRRNKTPNAVAGAVSRA 61

Query: 265 WWRWQHKYVQPKKVGMAPFYQLLVGSMVFFYAINYGRIKHHKNY 396
           WWRWQHKYV PK+ G+APF+QL V SM FFY INY ++KHH+NY
Sbjct: 62  WWRWQHKYVFPKRAGIAPFFQLTVASMTFFYLINYTKLKHHRNY 105


>BT003541-1|AAO39545.1|  492|Drosophila melanogaster RE05264p
           protein.
          Length = 492

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = +1

Query: 97  DYPKEYNPA-VHGPYDPARYYGKPD 168
           D+P+++N A  HG Y P  YYG+ D
Sbjct: 375 DHPRKHNEARQHGSYSPNLYYGQSD 399


>AE014134-1847|AAF52919.1|  572|Drosophila melanogaster CG5022-PA
           protein.
          Length = 572

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = +1

Query: 97  DYPKEYNPA-VHGPYDPARYYGKPD 168
           D+P+++N A  HG Y P  YYG+ D
Sbjct: 455 DHPRKHNEARQHGSYSPNLYYGQSD 479


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,356,356
Number of Sequences: 53049
Number of extensions: 465941
Number of successful extensions: 1246
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1246
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1846255872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)