Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19f16
(484 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150; Eukary... 215 6e-55
UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15; Eukaryo... 179 3e-44
UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3; Fungi/... 141 6e-33
UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5; Archaea... 122 3e-27
UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella... 122 4e-27
UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13; Archae... 114 1e-24
UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15; Euryar... 102 4e-21
UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9; Euryarc... 102 5e-21
UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1; Encephal... 99 3e-20
UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus M... 100 3e-20
UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10; Archae... 95 7e-19
UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3; Euryarc... 93 2e-18
UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo... 92 5e-18
UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_030012... 65 7e-10
UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1; ... 52 7e-06
UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|R... 49 6e-05
UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;... 43 0.003
UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n... 43 0.003
UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein ... 42 0.006
UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit... 38 0.16
UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7; n... 37 0.21
UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1; ... 36 0.36
UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albic... 36 0.48
UniRef50_P41911 Cluster: Glycerol-3-phosphate dehydrogenase [NAD... 36 0.48
UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyc... 36 0.63
UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2; ... 35 0.84
UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7; n... 33 4.5
UniRef50_A6G0N7 Cluster: Serine/threonine protein kinase; n=1; P... 32 5.9
UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211; Bacter... 32 5.9
UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n... 32 5.9
UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7; n... 32 5.9
UniRef50_A6SU82 Cluster: DNA topoisomerase III; n=57; Betaproteo... 32 7.8
UniRef50_A7EQB6 Cluster: Putative uncharacterized protein; n=1; ... 32 7.8
UniRef50_A6RZ06 Cluster: Putative uncharacterized protein; n=1; ... 32 7.8
>UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150;
Eukaryota|Rep: 40S ribosomal protein S5 - Homo sapiens
(Human)
Length = 204
Score = 215 bits (524), Expect = 6e-55
Identities = 99/115 (86%), Positives = 107/115 (93%)
Frame = +3
Query: 138 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 317
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 318 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRE 482
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPRE
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPRE 123
>UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15;
Eukaryota|Rep: 40S ribosomal protein S5 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 197
Score = 179 bits (435), Expect = 3e-44
Identities = 83/109 (76%), Positives = 96/109 (88%), Gaps = 1/109 (0%)
Frame = +3
Query: 159 EIKLFGRWSCYDVQVSDMSLQDYISV-KEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTN 335
E+KLF RWS DVQ+SD+SL DYI V K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 8 EVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 67
Query: 336 SLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRE 482
SLMMHGRNNGKKLMAVRI+KHA EIIHLLT +NP+QV+V A++NSGPRE
Sbjct: 68 SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPRE 116
>UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3;
Fungi/Metazoa group|Rep: 40S ribosomal protein S5-B -
Schizosaccharomyces pombe (Fission yeast)
Length = 203
Score = 141 bits (342), Expect = 6e-33
Identities = 74/126 (58%), Positives = 93/126 (73%)
Frame = +3
Query: 105 AGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYA 284
A S++ + +SL + IKLF ++ V+V D+SL DYI++ + LPH+AGR+
Sbjct: 2 AASIIPKEVSLDETG---HIKLFNKFPFEGVEVKDISLVDYITIGN--GQPLPHTAGRFQ 56
Query: 285 HKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAII 464
KRFRKA+C IVERLTNSLMM+GRNNGKKL+A RIVKHAFEII LLT +NPLQVLV A+
Sbjct: 57 TKRFRKARCFIVERLTNSLMMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAVA 116
Query: 465 NSGPRE 482
GPRE
Sbjct: 117 ACGPRE 122
>UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5;
Archaea|Rep: 30S ribosomal protein S7P - Methanopyrus
kandleri
Length = 197
Score = 122 bits (295), Expect = 3e-27
Identities = 60/108 (55%), Positives = 77/108 (71%)
Frame = +3
Query: 159 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 338
E+K+FG+W +V+V D L+DYI +K Y LPH+ GR+A KRF KA+ PIVERL N
Sbjct: 12 EMKVFGKWDPTEVEVRDPGLKDYICLKPMY---LPHTGGRHAKKRFAKAEVPIVERLINR 68
Query: 339 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRE 482
+M +N GKK +A IVK AF+IIH TGENP+QVLV A+ N+ PRE
Sbjct: 69 VMRTEKNTGKKHLAYNIVKRAFDIIHERTGENPIQVLVQALENAAPRE 116
>UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella
natans|Rep: Ribosomal protein S5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 207
Score = 122 bits (294), Expect = 4e-27
Identities = 52/108 (48%), Positives = 76/108 (70%)
Frame = +3
Query: 159 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 338
++K+F RW V+++D+S+ +YI +KY + +PHS+G Y K F+K CPI+ERL S
Sbjct: 19 KMKVFNRWELEKVKINDISISNYIYFNKKYGELVPHSSGNYDKKPFKKTYCPILERLVCS 78
Query: 339 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRE 482
LM+ RN+GKK+ + IVKHAF ++H TG+NP+Q+LV AI N P E
Sbjct: 79 LMLKSRNSGKKIKTIAIVKHAFYLLHKTTGKNPIQLLVDAISNCAPHE 126
>UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13;
Archaea|Rep: 30S ribosomal protein S7P - Pyrobaculum
aerophilum
Length = 223
Score = 114 bits (274), Expect = 1e-24
Identities = 59/107 (55%), Positives = 72/107 (67%)
Frame = +3
Query: 162 IKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSL 341
I LFG+WS DV V D L+ YI +K LPH+ GRY + RF KA+ PIVERL N +
Sbjct: 39 ILLFGKWSYEDVVVRDPGLRRYICLKPVI---LPHTEGRYQNTRFGKARIPIVERLINLM 95
Query: 342 MMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRE 482
M GRN GKK A IVK AF++I+ TG+NPLQV + AIIN+ PRE
Sbjct: 96 MRPGRNTGKKHKAYNIVKRAFDLIYYKTGKNPLQVFIDAIINTAPRE 142
>UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Halobacterium salinarium (Halobacterium halobium)
Length = 210
Score = 102 bits (245), Expect = 4e-21
Identities = 55/136 (40%), Positives = 82/136 (60%)
Frame = +3
Query: 75 EENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAK 254
E+ D+ EA + +T + A KLFG+W ++ D S + Y++V
Sbjct: 4 EQPAEDETEEAAAESEDTQEVAANA-----KLFGKWDVAEIHYEDPSTRRYLAVTP---- 54
Query: 255 YLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGEN 434
+ H+ GR+A K+F+K++ IVERL N LM G N GKK A++IV+ AF+I+H T EN
Sbjct: 55 -VAHTMGRHAQKQFKKSEISIVERLANRLMKTGANAGKKQQALKIVRDAFDIVHERTDEN 113
Query: 435 PLQVLVTAIINSGPRE 482
P+QVLV+A+ N+ PRE
Sbjct: 114 PIQVLVSAVENAAPRE 129
>UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanosarcina acetivorans
Length = 189
Score = 102 bits (244), Expect = 5e-21
Identities = 47/106 (44%), Positives = 74/106 (69%)
Frame = +3
Query: 165 KLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLM 344
K+FG+W +V+V D+ ++ Y+S+ +PHS+G++A ++F K++ IVERL N+LM
Sbjct: 6 KIFGKWDPTEVEVKDLGIKRYVSLTPVI---VPHSSGKHARQQFNKSEISIVERLANNLM 62
Query: 345 MHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRE 482
N GKK + +R V+ AF+I++ T +NP+QVLV AI N+GPRE
Sbjct: 63 RTETNTGKKQVTLRAVEEAFDIVNKKTKQNPIQVLVDAIANAGPRE 108
>UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S5 -
Encephalitozoon cuniculi
Length = 208
Score = 99 bits (238), Expect = 3e-20
Identities = 52/108 (48%), Positives = 73/108 (67%)
Frame = +3
Query: 159 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 338
EI LF ++S +V+V+++SL+ YI++ + +PH+A KA+ PI ER S
Sbjct: 22 EINLFEKYSYEEVKVNNVSLRPYINLSRR--GIVPHAATTITKGTTGKARIPIAERFVCS 79
Query: 339 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRE 482
LM HGRN+GKK +A+ I + A IIH +T +NPLQVLV AI+NSGPRE
Sbjct: 80 LMRHGRNSGKKRLAINIFEDACFIIHSMTKKNPLQVLVDAIVNSGPRE 127
>UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S7 -
Methanoregula boonei (strain 6A8)
Length = 204
Score = 99.5 bits (237), Expect = 3e-20
Identities = 52/122 (42%), Positives = 76/122 (62%), Gaps = 2/122 (1%)
Frame = +3
Query: 123 ETMSLPQAADIPEIK--LFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRF 296
E + P+ P+ K LF +W +V+V+D SL Y+++ + +PHS G+++ + F
Sbjct: 5 EVKAQPEGDAAPQSKALLFNKWDVSEVKVTDPSLVRYVNLTPQI---IPHSCGKFSRQEF 61
Query: 297 RKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 476
KA IVERL N LM N GKK +A+ IV+ AFE+I+ T NP++VLV AI N+GP
Sbjct: 62 NKANMMIVERLINRLMQTENNTGKKQLAIGIVRDAFELINKKTKRNPIEVLVEAIGNTGP 121
Query: 477 RE 482
RE
Sbjct: 122 RE 123
>UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10;
Archaea|Rep: 30S ribosomal protein S7P - Pyrococcus
horikoshii
Length = 218
Score = 95.1 bits (226), Expect = 7e-19
Identities = 57/124 (45%), Positives = 74/124 (59%), Gaps = 16/124 (12%)
Frame = +3
Query: 159 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 338
EIK+ GRWS DV+V D SL+ YI+++ + LPH+ GR+A K F KA IVERL N
Sbjct: 17 EIKVMGRWSTEDVEVKDPSLKPYINLEPRL---LPHTHGRHAKKHFGKANVHIVERLINK 73
Query: 339 LMMHGRN----------------NGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINS 470
+M G + N KK+ A +VK AF+II TG+NP+QVLV AI N+
Sbjct: 74 VMRSGGSHYKVAGHFMRREHRSLNSKKVRAYEVVKEAFKIIEKRTGKNPIQVLVWAIENA 133
Query: 471 GPRE 482
PRE
Sbjct: 134 APRE 137
>UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanococcus vannielii
Length = 194
Score = 93.5 bits (222), Expect = 2e-18
Identities = 50/108 (46%), Positives = 66/108 (61%)
Frame = +3
Query: 159 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 338
EIKLFG+W V V D SL+ +IS+ +PH+AGR + K F K + +VERL N
Sbjct: 8 EIKLFGKWDSTSVTVKDPSLKSHISLNPVL---IPHTAGRNSKKMFDKNKMHVVERLANK 64
Query: 339 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRE 482
LM N GKK + I++ A I+ T ENP+QV+V A+ NSGPRE
Sbjct: 65 LMATQVNTGKKNEVLSIIEEALTIVENRTKENPIQVVVDALENSGPRE 112
>UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo
sapiens|Rep: Ribosomal protein S5 variant - Homo sapiens
(Human)
Length = 107
Score = 92.3 bits (219), Expect = 5e-18
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +3
Query: 303 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 458
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_03001272;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001272 - Ferroplasma acidarmanus fer1
Length = 182
Score = 65.3 bits (152), Expect = 7e-10
Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Frame = +3
Query: 195 VQVSDMSLQDYISVKEKYAKYLP-HSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKK 371
+Q+ D L YI++ YL + GR+++ K +ERL N+LM + GKK
Sbjct: 9 IQIKDQGLATYINL----TSYLNLDTGGRFSNYLSGKRNVNTIERLLNNLMRTEKWTGKK 64
Query: 372 LMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRE 482
A +++ AF+II T +NP+Q+LV+AI NS PRE
Sbjct: 65 YSAYKVMSQAFDIIATKTKQNPVQILVSAIENSAPRE 101
>UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 77
Score = 52.0 bits (119), Expect = 7e-06
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +3
Query: 69 MAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYIS 233
M+E D+ E V E + Q A++P+IKLFGRWS D+ +SD+S+ DYI+
Sbjct: 1 MSEVEAFDNFEEEQPQVFEQAPVVQPAELPDIKLFGRWSSDDIHISDISVSDYIA 55
>UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|Rep:
ORFD 65 - Desulfurococcus mobilis
Length = 65
Score = 48.8 bits (111), Expect = 6e-05
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = -1
Query: 409 ISNACLTIRTAISFLPLFRPCIIREFVRRSTIGHWALRKRLCAYLPAE*GKYFAY 245
+S A LT+ A FLP+F P I F+ ST+G W L KRLC+ LP G+Y +
Sbjct: 1 MSKAFLTMWYARCFLPMFLPGRITLFISLSTMGTWVLPKRLCSCLPPVCGRYTGF 55
>UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 280
Score = 43.2 bits (97), Expect = 0.003
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +3
Query: 405 EIIHLLTGENPLQVLVTAIINSGPRE 482
++ HLL +NPLQVLV AIINSGPRE
Sbjct: 174 QLQHLLLAQNPLQVLVNAIINSGPRE 199
>UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n=1;
Odontella sinensis|Rep: Chloroplast 30S ribosomal
protein S7 - Odontella sinensis (Marine centric diatom)
Length = 158
Score = 43.2 bits (97), Expect = 0.003
Identities = 26/63 (41%), Positives = 34/63 (53%)
Frame = +3
Query: 288 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIN 467
KRF +A L + L+ +GKK +A IV AFEII + T E+PL V AI N
Sbjct: 9 KRFPEADSTYNSYLVSLLITRILKSGKKNLAQNIVNAAFEIIKVKTNEDPLVVFERAIRN 68
Query: 468 SGP 476
+ P
Sbjct: 69 ASP 71
>UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein S7;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein S7 - Candida albicans (Yeast)
Length = 251
Score = 42.3 bits (95), Expect = 0.006
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = +3
Query: 276 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 455
+YA+K+ P V+ LTN +M H GKK A ++V A I+ L ++P++VL
Sbjct: 105 KYANKKIPLRSDPTVDNLTNLIMRH----GKKAKAQKVVSRALYIVQLKLRKDPIEVLRE 160
Query: 456 AIINSGP 476
+ GP
Sbjct: 161 TLDKLGP 167
>UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit
S7; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S7 - Schizosaccharomyces pombe
(Fission yeast)
Length = 259
Score = 37.5 bits (83), Expect = 0.16
Identities = 23/53 (43%), Positives = 28/53 (52%)
Frame = +3
Query: 318 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 476
V+ L N +M +GKK A +IV A II TGENP+ VL AI P
Sbjct: 126 VQHLVNLIM----RDGKKAKAEKIVATALSIIQKETGENPIDVLKQAIAEISP 174
>UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7;
n=22; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Guillardia theta (Cryptomonas phi)
Length = 156
Score = 37.1 bits (82), Expect = 0.21
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +3
Query: 324 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 461
RL N L + GKK +A RI+ +AF+II TGE+ + V +AI
Sbjct: 21 RLVNMLTVRILKEGKKHLAQRIIYNAFDIIKQRTGEDAILVFESAI 66
>UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 299
Score = 36.3 bits (80), Expect = 0.36
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +3
Query: 312 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 476
P +E LTN LM +GKK A R + II +T NPL ++ AI + P
Sbjct: 164 PTLEFLTNLLM----KDGKKAQAQRFITRTLSIISSVTNSNPLPLIHDAIYKAAP 214
>UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albicans
IPF3361; n=2; Saccharomycetaceae|Rep: Similar to
CA4785|IPF3361 Candida albicans IPF3361 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 263
Score = 35.9 bits (79), Expect = 0.48
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +3
Query: 279 YAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 458
+A+KR P ++ TN +M +GKK A +I+ A I++L T ++PL +L
Sbjct: 118 FANKRIPLPSNPTIDNFTNLIM----RDGKKSKAQKILSRALYIVYLKTRKDPLVILEET 173
Query: 459 IINSGP 476
+ P
Sbjct: 174 LDKMAP 179
>UniRef50_P41911 Cluster: Glycerol-3-phosphate dehydrogenase [NAD+]
2, mitochondrial precursor; n=37; Saccharomycetales|Rep:
Glycerol-3-phosphate dehydrogenase [NAD+] 2,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 440
Score = 35.9 bits (79), Expect = 0.48
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +3
Query: 57 KVPIMAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISV 236
KV ++ NW +A+ V+ E L PE+++ W +D ++ D +L D I+
Sbjct: 85 KVTVIGSGNWGTTIAK---VIAENTELHSHIFEPEVRM---W-VFDEKIGDENLTDIINT 137
Query: 237 KEKYAKYLPH 266
+ + KYLP+
Sbjct: 138 RHQNVKYLPN 147
>UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyces
cerevisiae YJR113c RSM7; n=2; Saccharomycetales|Rep:
Similarities with sp|P47150 Saccharomyces cerevisiae
YJR113c RSM7 - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 274
Score = 35.5 bits (78), Expect = 0.63
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 312 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 476
P V+ +TN +M H GKK A +I+ A +H T ++P+++L A+ + P
Sbjct: 139 PTVQHVTNMIMRH----GKKDRAQKIISRALYFLHCKTRKDPVELLKKALDDMAP 189
>UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 468
Score = 35.1 bits (77), Expect = 0.84
Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Frame = +3
Query: 48 SNRKVPIMAEENWNDDVAEAGSVVVE-TMSLPQAADIPEIKLF--GRWSCYDVQVSDMSL 218
S+ + ++AEENW +A+AG + + MS+ +D+ E+ L+ GR + ++++ D
Sbjct: 201 SDEEEALVAEENWGQSIADAGGYMHKGKMSVWARSDMDEMCLWGAGRGNIGEIELQDH-- 258
Query: 219 QDYISVKEKYAKYLPHSAG 275
+ Y S + K+ + P G
Sbjct: 259 KQYPSSEFKFKTFTPPKTG 277
>UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 589
Score = 32.7 bits (71), Expect = 4.5
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 321 ERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENP--LQVLVTAIINS 470
ER ++ L+ + +K + V++ KH FEI+H + G P + VL T +++S
Sbjct: 477 ERNSSKLLSQRQKQYQKFLHVKM-KHVFEILHSIEGNKPYTMTVLSTLVVDS 527
>UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7;
n=94; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Zea mays (Maize)
Length = 156
Score = 32.7 bits (71), Expect = 4.5
Identities = 22/60 (36%), Positives = 30/60 (50%)
Frame = +3
Query: 282 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 461
A KR K+ RL N ++ +GKK +A +I+ A + I T NPL VL AI
Sbjct: 7 AEKRTAKSDPIFRNRLVNMVVNRIMKDGKKSLAYQILYRAVKKIQQKTETNPLLVLRQAI 66
>UniRef50_A6G0N7 Cluster: Serine/threonine protein kinase; n=1;
Plesiocystis pacifica SIR-1|Rep: Serine/threonine
protein kinase - Plesiocystis pacifica SIR-1
Length = 592
Score = 32.3 bits (70), Expect = 5.9
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +3
Query: 90 DDVAEAGSVVVETMSLPQAADIPEIKLFGR 179
DD+ G VV++ +SL QAAD +++LF R
Sbjct: 56 DDLDSGGPVVIKELSLAQAADWKQVELFER 85
>UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211;
Bacteria|Rep: 30S ribosomal protein S7 - Streptococcus
pneumoniae
Length = 156
Score = 32.3 bits (70), Expect = 5.9
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = +3
Query: 315 IVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 476
+V RL N +M+ +GK+ A IV AFE I TG + L+V TA+ N P
Sbjct: 22 LVTRLINRVML----DGKRGTAASIVYGAFEQIKEATGNDALEVFETAMENIMP 71
>UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n=3;
Chlorophyceae|Rep: Chloroplast 30S ribosomal protein S7
- Stigeoclonium helveticum (Green alga)
Length = 174
Score = 32.3 bits (70), Expect = 5.9
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 312 PIVERLTNSLMMHG-RNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPR 479
PI +++ ++++ NGKK +A RIV F I +NP++V A+ N PR
Sbjct: 16 PIYNKVSVHMLVNRILKNGKKSIAYRIVYSVFRKISETMNQNPVEVWEKALNNVKPR 72
>UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7;
n=191; Magnoliophyta|Rep: Chloroplast 30S ribosomal
protein S7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 155
Score = 32.3 bits (70), Expect = 5.9
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +3
Query: 324 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 461
RL N L+ +GKK +A +I+ A + I T NPL VL AI
Sbjct: 21 RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAI 66
>UniRef50_A6SU82 Cluster: DNA topoisomerase III; n=57;
Betaproteobacteria|Rep: DNA topoisomerase III -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 881
Score = 31.9 bits (69), Expect = 7.8
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -3
Query: 464 DNGSHEYLQRVFSS*QVNNFKRMFDNTYGHQFFAIVPT 351
+N H++ +++ + V KR+FDNT FAI+PT
Sbjct: 353 NNNYHQFAKQITDNKWVKPNKRIFDNTKISDHFAIIPT 390
>UniRef50_A7EQB6 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 573
Score = 31.9 bits (69), Expect = 7.8
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +1
Query: 175 ADGVATMCKSLICLCRTTFPLKRSTQNIYLIQLAGMHTSVSV 300
ADGVAT+ +L+ + +T +TQN YLI + G T+V V
Sbjct: 351 ADGVATVL-TLVSIAQTQVVEFSATQNTYLIMVQGGSTTVGV 391
>UniRef50_A6RZ06 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 569
Score = 31.9 bits (69), Expect = 7.8
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +1
Query: 175 ADGVATMCKSLICLCRTTFPLKRSTQNIYLIQLAGMHTSVSV 300
ADGVAT+ +L+ + +T +TQN YLI + G T+V V
Sbjct: 350 ADGVATVL-TLVSIAQTQVVEFSATQNTYLIMVQGGSTTVGV 390
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,701,392
Number of Sequences: 1657284
Number of extensions: 9587937
Number of successful extensions: 23319
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 22769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23305
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27710252790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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