Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19f13
         (581 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069831-1|AAL39976.1|  485|Drosophila melanogaster SD07771p pro...    30   2.6  
AL138972-12|CAB72295.1|  721|Drosophila melanogaster EG:BACR7C10...    30   2.6  
AE014298-419|ABC67171.1|  485|Drosophila melanogaster CG9900-PC,...    30   2.6  
AE014298-418|AAF45794.1|  721|Drosophila melanogaster CG9900-PB,...    30   2.6  
X64390-1|CAB76122.1|  721|Drosophila melanogaster zw10 protein p...    29   3.5  
AE014297-2382|AAF55447.1|  443|Drosophila melanogaster CG14325-P...    28   8.0  

>AY069831-1|AAL39976.1|  485|Drosophila melanogaster SD07771p
           protein.
          Length = 485

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = +2

Query: 2   KCIKMKRVKCNKVRTVTEIVNSDEKIQKTYELAEFDLKNL-SSLESYETLKIKLALSKYM 178
           K  K   V  + V  +   +  D+ +    ++A  +++ +  +LE YET+K+K  +  YM
Sbjct: 134 KATKDYLVLLDLVGRLRAFIYGDDSVDGDAQVATPEVRRIFKALECYETIKVKYHVQAYM 193

Query: 179 AMLSTLEMTQPLLEI 223
              S  E    L+++
Sbjct: 194 LQQSLQERFDRLVQL 208


>AL138972-12|CAB72295.1|  721|Drosophila melanogaster
           EG:BACR7C10.3,FBgn0004643;mit(1)15 protein.
          Length = 721

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = +2

Query: 2   KCIKMKRVKCNKVRTVTEIVNSDEKIQKTYELAEFDLKNL-SSLESYETLKIKLALSKYM 178
           K  K   V  + V  +   +  D+ +    ++A  +++ +  +LE YET+K+K  +  YM
Sbjct: 134 KATKDYLVLLDLVGRLRAFIYGDDSVDGDAQVATPEVRRIFKALECYETIKVKYHVQAYM 193

Query: 179 AMLSTLEMTQPLLEI 223
              S  E    L+++
Sbjct: 194 LQQSLQERFDRLVQL 208


>AE014298-419|ABC67171.1|  485|Drosophila melanogaster CG9900-PC,
           isoform C protein.
          Length = 485

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = +2

Query: 2   KCIKMKRVKCNKVRTVTEIVNSDEKIQKTYELAEFDLKNL-SSLESYETLKIKLALSKYM 178
           K  K   V  + V  +   +  D+ +    ++A  +++ +  +LE YET+K+K  +  YM
Sbjct: 134 KATKDYLVLLDLVGRLRAFIYGDDSVDGDAQVATPEVRRIFKALECYETIKVKYHVQAYM 193

Query: 179 AMLSTLEMTQPLLEI 223
              S  E    L+++
Sbjct: 194 LQQSLQERFDRLVQL 208


>AE014298-418|AAF45794.1|  721|Drosophila melanogaster CG9900-PB,
           isoform B protein.
          Length = 721

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = +2

Query: 2   KCIKMKRVKCNKVRTVTEIVNSDEKIQKTYELAEFDLKNL-SSLESYETLKIKLALSKYM 178
           K  K   V  + V  +   +  D+ +    ++A  +++ +  +LE YET+K+K  +  YM
Sbjct: 134 KATKDYLVLLDLVGRLRAFIYGDDSVDGDAQVATPEVRRIFKALECYETIKVKYHVQAYM 193

Query: 179 AMLSTLEMTQPLLEI 223
              S  E    L+++
Sbjct: 194 LQQSLQERFDRLVQL 208


>X64390-1|CAB76122.1|  721|Drosophila melanogaster zw10 protein
           protein.
          Length = 721

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = +2

Query: 2   KCIKMKRVKCNKVRTVTEIVNSDEKIQKTYELAEFDLKNL-SSLESYETLKIKLALSKYM 178
           K  K   V  + V  +   +  D+ +    ++A  +++ +  +LE YET+K+K  +  YM
Sbjct: 134 KATKDYLVLLDLVGRLRAFIYGDDSVDGDAQVATPEVRRIFKALECYETIKVKYHVQAYM 193

Query: 179 AMLSTLEMTQPLLEI 223
              S  E    L+++
Sbjct: 194 LQQSLQERFARLVQL 208


>AE014297-2382|AAF55447.1|  443|Drosophila melanogaster CG14325-PA
           protein.
          Length = 443

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +2

Query: 14  MKRVKCNKVRTVTEIVNSDEKIQKTYELAEFDLKNLSSLESYETLKIKLALSKYMAML 187
           MK + CNK+    ++ N+   +    +  EF LKN+   + +E LK K    K+ AM+
Sbjct: 386 MKIISCNKLLERLDLRNTGLSLDMRRKFQEFLLKNVDR-KKHEALKQK-QRDKFKAMM 441


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,110,198
Number of Sequences: 53049
Number of extensions: 509282
Number of successful extensions: 1139
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1139
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2317436688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)