Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19f11
         (576 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical pr...   136   1e-32
Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical p...    80   1e-15
Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical pr...    31   0.44 
Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical pr...    31   0.78 
Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical p...    31   0.78 
Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical pr...    28   4.1  
Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical p...    27   7.2  
AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical...    27   7.2  
AF038613-2|AAB92049.1|  477|Caenorhabditis elegans Cytochrome p4...    27   7.2  
Z66495-5|CAA91272.1|  501|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical
           protein F54H12.6 protein.
          Length = 213

 Score =  136 bits (328), Expect = 1e-32
 Identities = 76/170 (44%), Positives = 98/170 (57%), Gaps = 3/170 (1%)
 Frame = +2

Query: 74  VGDVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAP-AANLPHVLRWYNQIAS 250
           V DVK+  GL   N  LAE+++ +G+  S  D Q+F  +G AP A+  P+V RWY  +AS
Sbjct: 2   VADVKSPAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVAS 61

Query: 251 YTPAERKTWSQ--GTSPLXXXXXXXXXXXXXXXXXXXXVDLFGSGXXXXXXXXXXXXXXX 424
           YT AERKTW+   G++P                      DLFGS                
Sbjct: 62  YTDAERKTWASAGGSAPAAAAADGDDF------------DLFGSDDEEEDAEKAKIVEER 109

Query: 425 LKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLW 574
           L AYA+KK+KK   IAKSS++LDVKPWDDETD+ EME  VR+IEM+GL+W
Sbjct: 110 LAAYAEKKAKKAGPIAKSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVW 159


>Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical
           protein Y41E3.10a protein.
          Length = 263

 Score = 79.8 bits (188), Expect = 1e-15
 Identities = 39/71 (54%), Positives = 46/71 (64%)
 Frame = +2

Query: 362 DLFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQ 541
           DLFGS                L AYA KK+ K   IAKSS++LDVKPWDDETD+ EME  
Sbjct: 139 DLFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDLGEMEKL 198

Query: 542 VRTIEMEGLLW 574
           VR+IEM+GL+W
Sbjct: 199 VRSIEMDGLVW 209


>Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical
           protein AC3.3 protein.
          Length = 425

 Score = 31.5 bits (68), Expect = 0.44
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -2

Query: 263 QPECMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 126
           QP CM   + + VV+     PAP Q     + Q +++C+QT+   Q
Sbjct: 130 QPSCMPACEQSCVVQ----TPAPVQCVPQCQQQCQQQCVQTQPIQQ 171


>Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical protein
            M01F1.7 protein.
          Length = 1034

 Score = 30.7 bits (66), Expect = 0.78
 Identities = 17/65 (26%), Positives = 30/65 (46%)
 Frame = +2

Query: 80   DVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIASYTP 259
            D +   G  D+ +Y  E+ Y+  Y  ++ D+Q           N PH L ++N   S  P
Sbjct: 866  DPRVRPGAVDVVRYWQEQGYLIIYLTARPDMQQRVVSAWLAQHNFPHALLFFNNSFSTEP 925

Query: 260  AERKT 274
             ++K+
Sbjct: 926  LKQKS 930


>Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical
            protein M01F1.7 protein.
          Length = 1034

 Score = 30.7 bits (66), Expect = 0.78
 Identities = 17/65 (26%), Positives = 30/65 (46%)
 Frame = +2

Query: 80   DVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIASYTP 259
            D +   G  D+ +Y  E+ Y+  Y  ++ D+Q           N PH L ++N   S  P
Sbjct: 866  DPRVRPGAVDVVRYWQEQGYLIIYLTARPDMQQRVVSAWLAQHNFPHALLFFNNSFSTEP 925

Query: 260  AERKT 274
             ++K+
Sbjct: 926  LKQKS 930


>Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical
           protein AC3.4 protein.
          Length = 425

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -2

Query: 263 QPECMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 126
           QP CM   + + VV+     PA  Q     + Q +++C+QT+   Q
Sbjct: 130 QPSCMPACEQSCVVQ----TPAAVQCVPQCQQQCQQQCVQTQPIQQ 171


>Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical
            protein C24H11.7 protein.
          Length = 1820

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 218  HVLRWYNQIASYTPAERKTWSQGTSP 295
            H+L   +Q+ S TPA    W+QG SP
Sbjct: 1524 HLLDLCSQLHSQTPAIFAKWAQGASP 1549


>AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical
            protein C24H11.7 protein.
          Length = 1820

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 218  HVLRWYNQIASYTPAERKTWSQGTSP 295
            H+L   +Q+ S TPA    W+QG SP
Sbjct: 1524 HLLDLCSQLHSQTPAIFAKWAQGASP 1549


>AF038613-2|AAB92049.1|  477|Caenorhabditis elegans Cytochrome p450
           family protein 25A5 protein.
          Length = 477

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 98  GLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPA 205
           G+N LNQ L + +Y +G+  +++ V      GK  A
Sbjct: 93  GMNQLNQSLLQNTYATGWKHTRSAVAPIFSTGKMKA 128


>Z66495-5|CAA91272.1|  501|Caenorhabditis elegans Hypothetical
           protein C36A4.6 protein.
          Length = 501

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +2

Query: 98  GLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPA 205
           G+N LNQ L + +Y +G+  +++ +      GK  A
Sbjct: 117 GMNQLNQSLLQNTYATGWKHTRSAIAPIFSTGKMKA 152


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,773,964
Number of Sequences: 27780
Number of extensions: 219558
Number of successful extensions: 647
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 644
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)