Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19f10
         (646 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0284 + 2107562-2107811,2107928-2108208,2108589-2109413           27   9.7  
06_01_0258 - 1913408-1913506,1913593-1913631,1913720-1913859,191...    27   9.7  

>11_01_0284 + 2107562-2107811,2107928-2108208,2108589-2109413
          Length = 451

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 479 VYNKCCKRHNCVCCKQTHYY 538
           ++  CC   NC+ C+Q  +Y
Sbjct: 315 MFTPCCCDRNCISCRQLQFY 334


>06_01_0258 -
           1913408-1913506,1913593-1913631,1913720-1913859,
           1914148-1914154,1914270-1914440,1914541-1914712,
           1915367-1915741,1915892-1915910,1916508-1916581,
           1916744-1916937
          Length = 429

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = -3

Query: 584 KHNIVYEQKKQQF*SNNNGFVCNKHNCGVYSICYTQTTHI 465
           +H ++YE ++Q    N    V     CGV ++ + + +H+
Sbjct: 289 QHGVIYEDQRQYHHLNFTAKVKRADGCGVENLFFAEISHM 328


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,660,469
Number of Sequences: 37544
Number of extensions: 240905
Number of successful extensions: 445
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)