Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19f09
(399 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57921| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_38872| Best HMM Match : Histone (HMM E-Value=3e-31) 29 1.8
SB_46530| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.2
SB_23788| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38) 27 4.3
SB_57970| Best HMM Match : Histone (HMM E-Value=9.8e-31) 27 5.6
SB_56481| Best HMM Match : Histone (HMM E-Value=8.6e-29) 27 5.6
SB_39197| Best HMM Match : Histone (HMM E-Value=4e-29) 27 5.6
SB_34142| Best HMM Match : Histone (HMM E-Value=4e-29) 27 5.6
SB_32335| Best HMM Match : Histone (HMM E-Value=4e-29) 27 5.6
SB_29672| Best HMM Match : Histone (HMM E-Value=4e-29) 27 5.6
SB_25738| Best HMM Match : Fer4 (HMM E-Value=1.1) 27 5.6
SB_25346| Best HMM Match : Histone (HMM E-Value=4e-29) 27 5.6
SB_24672| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_24338| Best HMM Match : Histone (HMM E-Value=9.7e-28) 27 5.6
SB_23111| Best HMM Match : Histone (HMM E-Value=4e-29) 27 5.6
SB_16864| Best HMM Match : Histone (HMM E-Value=4e-29) 27 5.6
SB_13575| Best HMM Match : Histone (HMM E-Value=4e-29) 27 5.6
SB_11336| Best HMM Match : Histone (HMM E-Value=4e-29) 27 5.6
SB_10189| Best HMM Match : Histone (HMM E-Value=4e-29) 27 5.6
SB_7802| Best HMM Match : Histone (HMM E-Value=4e-29) 27 5.6
SB_4428| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_3228| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_59150| Best HMM Match : Histone (HMM E-Value=4e-29) 27 5.6
SB_51806| Best HMM Match : Histone (HMM E-Value=4e-29) 27 5.6
SB_49903| Best HMM Match : Histone (HMM E-Value=4e-29) 27 5.6
SB_46692| Best HMM Match : Histone (HMM E-Value=4e-29) 27 5.6
SB_40749| Best HMM Match : Histone (HMM E-Value=4e-29) 27 5.6
SB_39962| Best HMM Match : Histone (HMM E-Value=4e-29) 27 5.6
SB_27259| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_25215| Best HMM Match : Histone (HMM E-Value=4e-29) 27 5.6
SB_24392| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_20041| Best HMM Match : Histone (HMM E-Value=4e-29) 27 5.6
SB_18317| Best HMM Match : Histone (HMM E-Value=4e-29) 27 5.6
SB_14748| Best HMM Match : Histone (HMM E-Value=4e-29) 27 5.6
SB_5066| Best HMM Match : Histone (HMM E-Value=9.8e-31) 27 5.6
SB_2687| Best HMM Match : Histone (HMM E-Value=4e-29) 27 5.6
SB_1957| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_52376| Best HMM Match : Histone (HMM E-Value=3e-30) 27 7.4
SB_51995| Best HMM Match : Histone (HMM E-Value=3.7e-15) 27 7.4
SB_35615| Best HMM Match : Histone (HMM E-Value=6.9e-06) 27 7.4
SB_21879| Best HMM Match : Histone (HMM E-Value=1.4e-08) 27 7.4
SB_18888| Best HMM Match : Histone (HMM E-Value=1.4e-30) 27 7.4
SB_18627| Best HMM Match : Histone (HMM E-Value=1.7e-30) 27 7.4
SB_12210| Best HMM Match : Histone (HMM E-Value=1.4e-08) 27 7.4
SB_2542| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_55463| Best HMM Match : OPA3 (HMM E-Value=0) 27 7.4
SB_45974| Best HMM Match : Histone (HMM E-Value=1.6e-28) 27 7.4
SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_31726| Best HMM Match : Histone (HMM E-Value=9.6e-32) 26 9.8
SB_26808| Best HMM Match : Histone (HMM E-Value=9.6e-32) 26 9.8
SB_14048| Best HMM Match : CBF (HMM E-Value=9.6e-17) 26 9.8
SB_15458| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.8
>SB_57921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -2
Query: 311 SSFVTRKFAKKLSSSCVKTLSSTNLCNVNVTLTLFNNACIKKST 180
SS ++ FA+ + +CV L NLC+ T + + CI+ T
Sbjct: 39 SSLLSSYFARARTKNCVFLLHGRNLCSGQNTTPIMDAWCIRNYT 82
>SB_38872| Best HMM Match : Histone (HMM E-Value=3e-31)
Length = 242
Score = 28.7 bits (61), Expect = 1.8
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIEN--DKIYKLVETVDSSNKLSRRQVDFLIHALLNN 213
+QV+PD S K ++N F+ND E + +L + + +S R+V + LL
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAH-YNKRSTISSREVQTAVRLLLPA 101
Query: 214 VSVTF 228
TF
Sbjct: 102 GKTTF 106
>SB_46530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.9 bits (59), Expect = 3.2
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +1
Query: 76 LKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHAL 204
L+R+ +F + I N+++YK + N++ R++ +L H L
Sbjct: 12 LRRICGIFWPNVISNEELYKNTSSSSLVNQIRYRRLKWLGHVL 54
>SB_23788| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38)
Length = 1122
Score = 27.5 bits (58), Expect = 4.3
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +1
Query: 121 DKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVTFTLHRFVDDNVLTQDELSFLA 288
+K+ +++E N S R+ DFL++AL + + + RFV V+T LS LA
Sbjct: 35 NKLAQMIEGTALHNTESIRKSDFLVYALCSTLLSSHPACRFV---VVTLHTLSCLA 87
>SB_57970| Best HMM Match : Histone (HMM E-Value=9.8e-31)
Length = 118
Score = 27.1 bits (57), Expect = 5.6
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 43 QVYPDKDFSLKLKRVINMFLNDEIEN--DKIYKLVETVDSSNKLSRRQVDFLIHALL 207
QV+PD S K ++N F+ND E + +L + + +S R+V + LL
Sbjct: 40 QVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAH-YNKKHTISSREVQTAVRLLL 95
>SB_56481| Best HMM Match : Histone (HMM E-Value=8.6e-29)
Length = 125
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIE 117
+QV+PD S K ++N F+ND E
Sbjct: 46 KQVHPDTGISTKAMGIMNSFVNDIFE 71
>SB_39197| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIENDKI-YKLVETVDSSNKLSRRQVDFLIHALL 207
+QV+PD S K ++N F+ND E + + + +S R++ I LL
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFERIAAESSRLAHYNKKSTISSREIQTAIRLLL 99
>SB_34142| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIENDKI-YKLVETVDSSNKLSRRQVDFLIHALL 207
+QV+PD S K ++N F+ND E + + + +S R++ I LL
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFERIAAESSRLAHYNKKSTISSREIQTAIRLLL 99
>SB_32335| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIENDKI-YKLVETVDSSNKLSRRQVDFLIHALL 207
+QV+PD S K ++N F+ND E + + + +S R++ I LL
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFERIAAESSRLAHYNKKSTISSREIQTAIRLLL 99
>SB_29672| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIENDKI-YKLVETVDSSNKLSRRQVDFLIHALL 207
+QV+PD S K ++N F+ND E + + + +S R++ I LL
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFERIAAESSRLAHYNKKSTISSREIQTAIRLLL 99
>SB_25738| Best HMM Match : Fer4 (HMM E-Value=1.1)
Length = 241
Score = 27.1 bits (57), Expect = 5.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -2
Query: 326 NWYASSSFVTRKFAKKLSSSCVKTLSSTNLCNVNVTL 216
NW A + F+++KF K SS + L+ + + NV L
Sbjct: 176 NWLALAVFLSKKFRVKKSSYLLVNLTGSVILNVKQQL 212
>SB_25346| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIENDKI-YKLVETVDSSNKLSRRQVDFLIHALL 207
+QV+PD S K ++N F+ND E + + + +S R++ I LL
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFERIAAESSRLAHYNKKSTISSREIQTAIRLLL 99
>SB_24672| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 27.1 bits (57), Expect = 5.6
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 43 QVYPDKDFSLKLKRVINMFLNDEIEN--DKIYKLVETVDSSNKLSRRQVDFLIHALL 207
QV+PD S K ++N F+ND E + +L + + +S R+V + LL
Sbjct: 40 QVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAH-YNKKHTISSREVQTAVRLLL 95
>SB_24338| Best HMM Match : Histone (HMM E-Value=9.7e-28)
Length = 100
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIENDKI-YKLVETVDSSNKLSRRQVDFLIHALL 207
+QV+PD S K ++N F+ND E + + + +S R++ I LL
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFERIAAESSRLAHYNKKSTISSREIQTAIRLLL 99
>SB_23111| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIENDKI-YKLVETVDSSNKLSRRQVDFLIHALL 207
+QV+PD S K ++N F+ND E + + + +S R++ I LL
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFERIAAESSRLAHYNKKSTISSREIQTAIRLLL 99
>SB_16864| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 125
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIENDKI-YKLVETVDSSNKLSRRQVDFLIHALL 207
+QV+PD S K ++N F+ND E + + + +S R++ I LL
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFERIAAESSRLAHYNKKSTISSREIQTAIRLLL 99
>SB_13575| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIENDKI-YKLVETVDSSNKLSRRQVDFLIHALL 207
+QV+PD S K ++N F+ND E + + + +S R++ I LL
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFERIAAESSRLAHYNKKSTISSREIQTAIRLLL 99
>SB_11336| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 115
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIENDKI-YKLVETVDSSNKLSRRQVDFLIHALL 207
+QV+PD S K ++N F+ND E + + + +S R++ I LL
Sbjct: 36 KQVHPDTGISSKAMGIMNSFVNDIFERIAAESSRLAHYNKKSTISSREIQTAIRLLL 92
>SB_10189| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIENDKI-YKLVETVDSSNKLSRRQVDFLIHALL 207
+QV+PD S K ++N F+ND E + + + +S R++ I LL
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFERIAAESSRLAHYNKKSTISSREIQTAIRLLL 99
>SB_7802| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIENDKI-YKLVETVDSSNKLSRRQVDFLIHALL 207
+QV+PD S K ++N F+ND E + + + +S R++ I LL
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFERIAAESSRLAHYNKKSTISSREIQTAIRLLL 99
>SB_4428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIENDKI-YKLVETVDSSNKLSRRQVDFLIHALL 207
+QV+PD S K ++N F+ND E + + + +S R++ I LL
Sbjct: 65 KQVHPDTGISSKAMGIMNSFVNDIFERIAAESSRLAHYNKKSTISSREIQTAIRLLL 121
>SB_3228| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIENDKI-YKLVETVDSSNKLSRRQVDFLIHALL 207
+QV+PD S K ++N F+ND E + + + +S R++ I LL
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFERIAAESSRLAHYNKKSTISSREIQTAIRLLL 99
>SB_59150| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIENDKI-YKLVETVDSSNKLSRRQVDFLIHALL 207
+QV+PD S K ++N F+ND E + + + +S R++ I LL
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFERIAAESSRLAHYNKKSTISSREIQTAIRLLL 99
>SB_51806| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIENDKI-YKLVETVDSSNKLSRRQVDFLIHALL 207
+QV+PD S K ++N F+ND E + + + +S R++ I LL
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFERIAAESSRLAHYNKKSTISSREIQTAIRLLL 99
>SB_49903| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIENDKI-YKLVETVDSSNKLSRRQVDFLIHALL 207
+QV+PD S K ++N F+ND E + + + +S R++ I LL
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFERIAAESSRLAHYNKKSTISSREIQTAIRLLL 99
>SB_46692| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 103
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIENDKI-YKLVETVDSSNKLSRRQVDFLIHALL 207
+QV+PD S K ++N F+ND E + + + +S R++ I LL
Sbjct: 24 KQVHPDTGISSKAMGIMNSFVNDIFERIAAESSRLAHYNKKSTISSREIQTAIRLLL 80
>SB_40749| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIENDKI-YKLVETVDSSNKLSRRQVDFLIHALL 207
+QV+PD S K ++N F+ND E + + + +S R++ I LL
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFERIAAESSRLAHYNKKSTISSREIQTAIRLLL 99
>SB_39962| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 98
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIENDKI-YKLVETVDSSNKLSRRQVDFLIHALL 207
+QV+PD S K ++N F+ND E + + + +S R++ I LL
Sbjct: 19 KQVHPDTGISSKAMGIMNSFVNDIFERIAAESSRLAHYNKKSTISSREIQTAIRLLL 75
>SB_27259| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 27.1 bits (57), Expect = 5.6
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +1
Query: 76 LKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHAL 204
L+R+ +F + I N ++YK + N++ R++ +L H L
Sbjct: 12 LRRICGIFWPNVISNQELYKNTSSSSLVNQIRYRRLKWLGHVL 54
>SB_25215| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIENDKI-YKLVETVDSSNKLSRRQVDFLIHALL 207
+QV+PD S K ++N F+ND E + + + +S R++ I LL
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFERIAAESSRLAHYNKKSTISSREIQTAIRLLL 99
>SB_24392| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -2
Query: 365 YFHFYLSYY*YAGNWYASSSFVTRKFAKKLSSS-CVKTLSSTNLCNVNVTLTLFNNACIK 189
Y++ Y Y Y G WYA S K+ +S+ ++S +L + ++ T +N+
Sbjct: 205 YYYAYTWLYYYGGYWYARSCSYNNKYLCFVSADHRYPIINSGDLIALEMSYTSGSNSTYT 264
Query: 188 KST 180
+ T
Sbjct: 265 RCT 267
>SB_20041| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIENDKI-YKLVETVDSSNKLSRRQVDFLIHALL 207
+QV+PD S K ++N F+ND E + + + +S R++ I LL
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFERIAAESSRLAHYNKKSTISSREIQTAIRLLL 99
>SB_18317| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIENDKI-YKLVETVDSSNKLSRRQVDFLIHALL 207
+QV+PD S K ++N F+ND E + + + +S R++ I LL
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFERIAAESSRLAHYNKKSTISSREIQTAIRLLL 99
>SB_14748| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIENDKI-YKLVETVDSSNKLSRRQVDFLIHALL 207
+QV+PD S K ++N F+ND E + + + +S R++ I LL
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFERIAAESSRLAHYNKKSTISSREIQTAIRLLL 99
>SB_5066| Best HMM Match : Histone (HMM E-Value=9.8e-31)
Length = 118
Score = 27.1 bits (57), Expect = 5.6
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 43 QVYPDKDFSLKLKRVINMFLNDEIEN--DKIYKLVETVDSSNKLSRRQVDFLIHALL 207
QV+PD S K ++N F+ND E + +L + + +S R+V + LL
Sbjct: 40 QVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAH-YNKKHTISSREVQTAVRLLL 95
>SB_2687| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIENDKI-YKLVETVDSSNKLSRRQVDFLIHALL 207
+QV+PD S K ++N F+ND E + + + +S R++ I LL
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFERIAAESSRLAHYNKKSTISSREIQTAIRLLL 99
>SB_1957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 27.1 bits (57), Expect = 5.6
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIEN--DKIYKLVETVDSSNKLSRRQVDFLIHALL 207
+QV+PD S K ++N F+ND E + +L + + +S R+V + LL
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAH-YNKRSTISSREVQTAVRLLL 99
>SB_52376| Best HMM Match : Histone (HMM E-Value=3e-30)
Length = 122
Score = 26.6 bits (56), Expect = 7.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIE 117
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNCFVNDIFE 68
>SB_51995| Best HMM Match : Histone (HMM E-Value=3.7e-15)
Length = 138
Score = 26.6 bits (56), Expect = 7.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIE 117
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_35615| Best HMM Match : Histone (HMM E-Value=6.9e-06)
Length = 122
Score = 26.6 bits (56), Expect = 7.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIE 117
+QV+PD S K ++N F+ND E
Sbjct: 44 KQVHPDTGISSKAMGIMNSFVNDIFE 69
>SB_21879| Best HMM Match : Histone (HMM E-Value=1.4e-08)
Length = 83
Score = 26.6 bits (56), Expect = 7.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIE 117
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_18888| Best HMM Match : Histone (HMM E-Value=1.4e-30)
Length = 123
Score = 26.6 bits (56), Expect = 7.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIE 117
+QV+PD S K ++N F+ND E
Sbjct: 44 KQVHPDTGISSKAMGIMNSFVNDIFE 69
>SB_18627| Best HMM Match : Histone (HMM E-Value=1.7e-30)
Length = 279
Score = 26.6 bits (56), Expect = 7.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIE 117
+QV+PD S K ++N F+ND E
Sbjct: 44 KQVHPDTGISSKAMGIMNCFVNDIFE 69
>SB_12210| Best HMM Match : Histone (HMM E-Value=1.4e-08)
Length = 83
Score = 26.6 bits (56), Expect = 7.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIE 117
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_2542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 26.6 bits (56), Expect = 7.4
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -2
Query: 284 KKLSSSCVKTLSSTNLCNVNVTLTLFNNACIK 189
K ++ + V+ L +++C+ + LFNN C+K
Sbjct: 384 KGVNQALVRVLVYSSVCDGSEETALFNNQCVK 415
>SB_55463| Best HMM Match : OPA3 (HMM E-Value=0)
Length = 387
Score = 26.6 bits (56), Expect = 7.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIE 117
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNCFVNDIFE 68
>SB_45974| Best HMM Match : Histone (HMM E-Value=1.6e-28)
Length = 122
Score = 26.6 bits (56), Expect = 7.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIE 117
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1884
Score = 26.6 bits (56), Expect = 7.4
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 136 LVETVDSSNKLSRRQVDFLIHALLNNVSVTFTLHRFVDDN 255
LVE DS +R+ ++F + L+ + FTL + DN
Sbjct: 409 LVEAKDSGGLFTRQAIEFRVEQDLHQYNHEFTLEFSLSDN 448
>SB_31726| Best HMM Match : Histone (HMM E-Value=9.6e-32)
Length = 123
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIE 117
+QV+PD S K ++N F+ND E
Sbjct: 44 KQVHPDTGISSKAMVIMNSFVNDIFE 69
>SB_26808| Best HMM Match : Histone (HMM E-Value=9.6e-32)
Length = 123
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 40 EQVYPDKDFSLKLKRVINMFLNDEIE 117
+QV+PD S K ++N F+ND E
Sbjct: 44 KQVHPDTGISSKAMVIMNSFVNDIFE 69
>SB_14048| Best HMM Match : CBF (HMM E-Value=9.6e-17)
Length = 573
Score = 26.2 bits (55), Expect = 9.8
Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Frame = +1
Query: 52 PDKDFSLKLKRVINMFLNDEIENDKIYKLVETVD-SSNKLSRRQVDFLIHALLNNVSVTF 228
PD+ + K +I NDE+ N++ + V SS S + + L+ + + SV+
Sbjct: 250 PDRKIASKASHLIRCLGNDEMYNEQFDTIFRVVHISSFNTSVQALMLLLQVMSSRQSVSD 309
Query: 229 TLH-----RFVDDNVLTQDELSFLANFL 297
+ + +D N+ T + + N L
Sbjct: 310 RFYQALYTKMLDPNLCTSSKQAMFLNIL 337
>SB_15458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 112 IENDKIYKLVETVDSSNKLSRRQVDFLIHAL 204
+END + + VET+D K +R++ + + AL
Sbjct: 447 LENDSLRRHVETMDCDAKEARKEYESVTQAL 477
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,721,256
Number of Sequences: 59808
Number of extensions: 156569
Number of successful extensions: 487
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 703143849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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