Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19f05
         (592 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ320497-1|CAC60121.1| 4523|Homo sapiens axonemal beta heavy cha...    30   5.3  
AC102952-1|AAS07505.1|  453|Homo sapiens Homo sapiens dynein, ax...    30   5.3  
BC094751-1|AAH94751.1|  894|Homo sapiens exocyst complex compone...    30   7.0  
AK027413-1|BAB55095.1|  879|Homo sapiens protein ( Homo sapiens ...    30   7.0  
AK001755-1|BAA91886.1|  894|Homo sapiens protein ( Homo sapiens ...    30   7.0  

>AJ320497-1|CAC60121.1| 4523|Homo sapiens axonemal beta heavy chain
           dynein type 11 protein.
          Length = 4523

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 18/68 (26%), Positives = 34/68 (50%)
 Frame = +2

Query: 233 YKDFNRRILLIVFKFALNKSASYFPSYKEIIEVAIKRLNKINPDLKSSPRAMLQHYNECL 412
           Y      ++L + K    K +SYFP+ K+I  +A++       D++   R + +H  +CL
Sbjct: 292 YDQLQAPVVLKMVKILTTKQSSYFPTLKDIF-LAVENALLEAQDVELYLRPLRRHI-QCL 349

Query: 413 ENLDNPVT 436
           +  + P T
Sbjct: 350 QETEFPQT 357


>AC102952-1|AAS07505.1|  453|Homo sapiens Homo sapiens dynein,
           axonemal, heavy polypeptide 11 (DNAH11) protein.
          Length = 453

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 18/68 (26%), Positives = 34/68 (50%)
 Frame = +2

Query: 233 YKDFNRRILLIVFKFALNKSASYFPSYKEIIEVAIKRLNKINPDLKSSPRAMLQHYNECL 412
           Y      ++L + K    K +SYFP+ K+I  +A++       D++   R + +H  +CL
Sbjct: 175 YDQLQAPVVLKMVKILTTKQSSYFPTLKDIF-LAVENALLEAQDVELYLRPLRRHI-QCL 232

Query: 413 ENLDNPVT 436
           +  + P T
Sbjct: 233 QETEFPQT 240


>BC094751-1|AAH94751.1|  894|Homo sapiens exocyst complex component
           1 protein.
          Length = 894

 Score = 29.9 bits (64), Expect = 7.0
 Identities = 17/83 (20%), Positives = 38/83 (45%)
 Frame = +2

Query: 338 KRLNKINPDLKSSPRAMLQHYNECLENLDNPVTDEHHLLTFGKEVATKIFIEAFEYSYTN 517
           K+++ +N   +    ++    N+ +   D  V DE+  L   +E   +I +E  EY+ +N
Sbjct: 125 KKIDFVNVSSQLLEESVPSGENQSVTGGDEEVVDEYQELNAREEQDIEIMMEGCEYAISN 184

Query: 518 TNAISMDKTDEFDFIKQPTLKSL 586
             A +   + E   +    ++S+
Sbjct: 185 AEAFAEKLSRELQVLDGANIQSI 207


>AK027413-1|BAB55095.1|  879|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14507 fis, clone NT2RM1000399. ).
          Length = 879

 Score = 29.9 bits (64), Expect = 7.0
 Identities = 17/83 (20%), Positives = 38/83 (45%)
 Frame = +2

Query: 338 KRLNKINPDLKSSPRAMLQHYNECLENLDNPVTDEHHLLTFGKEVATKIFIEAFEYSYTN 517
           K+++ +N   +    ++    N+ +   D  V DE+  L   +E   +I +E  EY+ +N
Sbjct: 125 KKIDFVNVSSQLLEESVPSGENQSVTGGDEEVVDEYQELNAREEQDIEIMMEGCEYAISN 184

Query: 518 TNAISMDKTDEFDFIKQPTLKSL 586
             A +   + E   +    ++S+
Sbjct: 185 AEAFAEKLSRELQVLDGANIQSI 207


>AK001755-1|BAA91886.1|  894|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10893 fis, clone NT2RP4002791. ).
          Length = 894

 Score = 29.9 bits (64), Expect = 7.0
 Identities = 17/83 (20%), Positives = 38/83 (45%)
 Frame = +2

Query: 338 KRLNKINPDLKSSPRAMLQHYNECLENLDNPVTDEHHLLTFGKEVATKIFIEAFEYSYTN 517
           K+++ +N   +    ++    N+ +   D  V DE+  L   +E   +I +E  EY+ +N
Sbjct: 125 KKIDFVNVSSQLLEESVPSGENQSVTGGDEEVVDEYQELNAREEQDIEIMMEGCEYAISN 184

Query: 518 TNAISMDKTDEFDFIKQPTLKSL 586
             A +   + E   +    ++S+
Sbjct: 185 AEAFAEKLSRELQVLDGANIQSI 207


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,455,607
Number of Sequences: 237096
Number of extensions: 1383443
Number of successful extensions: 2778
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2778
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)