Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19f03
         (589 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   1.8  
AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    24   3.2  
AY659931-1|AAT51799.1|  167|Anopheles gambiae lysozyme i-1 protein.    24   4.2  
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    23   5.5  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   7.3  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   7.3  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 6/105 (5%)
 Frame = +1

Query: 100 TSTPAGFTNVLNAPSVRNLGNNRYQPGYQLSNNRFVSTSDINRI-TRNNDVPNIRNVFQG 276
           +S+PA  +     P+ R+L NN +  G++   N  V  + IN    R  D+    N    
Sbjct: 240 SSSPAYSSITHYEPTARSLANNTFVDGFKF--NGLVQLNHINNSHGRMLDLLYANNAAAK 297

Query: 277 ISDPQINSLRQLRRMDN---VPDFH--YHTKQTRSNAVRQNFPET 396
           +  P   S+  L  +D+     DF+   ++   R++  RQN   T
Sbjct: 298 LCSPVFPSVVPLVPLDSYHPALDFNIRINSSTRRNSTTRQNSTTT 342


>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +1

Query: 151 NLGNNRYQPGYQLSNNRFVSTSDINRITRNNDVPNIR 261
           N   +RY+P  Q    RF S +D     R   +P+IR
Sbjct: 34  NYLTDRYKPIGQSLQTRFSSEADTRIAVRATTLPDIR 70


>AY659931-1|AAT51799.1|  167|Anopheles gambiae lysozyme i-1 protein.
          Length = 167

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = -3

Query: 569 VLLMALI-ISCTNVAAVNKR*PPPAKSMPTPATFKVLM*LCKRGFCCSAF*TPSGVRTLV 393
           +LL+ LI I  ++V A      PP + +  P T   L  +C+    C A    SG    V
Sbjct: 6   LLLVCLIAIGVSSVLADVSHIAPPQQQLEDPVTDVCLSCICEASSGCDASLRCSGD---V 62

Query: 392 SGKFCLT 372
            G F +T
Sbjct: 63  CGMFAIT 69


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 10/47 (21%)
 Frame = -1

Query: 271 EIHCV-CW--GHRCYE*FC-------LCLKCSQTGC*IIDSPADICC 161
           ++ C  CW  GH+ +E  C       LC+KC Q G  I + P  + C
Sbjct: 327 QVKCFKCWKLGHKGFE--CTGQDRSKLCIKCGQEGHKIRECPNAMTC 371


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 13/47 (27%), Positives = 20/47 (42%)
 Frame = +3

Query: 198 PVCEHFRHKQNHS*QRCPQHTQCISGHFRPSNKLIAPIAAHGQRARL 338
           P  +H  H  +H     P +   +  +++PS     PI    QRA L
Sbjct: 173 PYPQHVLHPAHHPALLHPAYHTGLHHYYQPSPSHPQPIVPQPQRASL 219


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 13/47 (27%), Positives = 20/47 (42%)
 Frame = +3

Query: 198 PVCEHFRHKQNHS*QRCPQHTQCISGHFRPSNKLIAPIAAHGQRARL 338
           P  +H  H  +H     P +   +  +++PS     PI    QRA L
Sbjct: 173 PYPQHVLHPAHHPALLHPAYHTGLHHYYQPSPSHPQPIVPQPQRASL 219


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,876
Number of Sequences: 2352
Number of extensions: 14050
Number of successful extensions: 53
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)