Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19f03
(589 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-465|AAN13380.1| 1573|Drosophila melanogaster CG10272-PC... 30 2.0
AE014297-464|AAN13379.1| 1848|Drosophila melanogaster CG10272-PD... 30 2.0
AE014297-463|AAN13378.1| 1848|Drosophila melanogaster CG10272-PB... 30 2.0
AE014297-462|AAF54122.2| 1848|Drosophila melanogaster CG10272-PA... 30 2.0
AF492764-1|AAM11673.1| 417|Drosophila melanogaster gag protein ... 30 2.7
AY075429-1|AAL68245.1| 1384|Drosophila melanogaster LD47780p pro... 29 4.7
AE014135-123|AAX52511.1| 1384|Drosophila melanogaster CG31992-PH... 29 4.7
AE014135-122|AAX52510.1| 1384|Drosophila melanogaster CG31992-PG... 29 4.7
AE014135-121|AAN06509.1| 1384|Drosophila melanogaster CG31992-PF... 29 4.7
AE014135-120|AAN06508.1| 1384|Drosophila melanogaster CG31992-PE... 29 4.7
AE014135-119|AAN06507.1| 1384|Drosophila melanogaster CG31992-PD... 29 4.7
AE014135-118|AAF59324.2| 1384|Drosophila melanogaster CG31992-PC... 29 4.7
AE014135-117|AAF59322.2| 1384|Drosophila melanogaster CG31992-PB... 29 4.7
AE014135-116|AAF59323.2| 1384|Drosophila melanogaster CG31992-PA... 29 4.7
BT021306-1|AAX33454.1| 745|Drosophila melanogaster RE19569p pro... 29 6.2
AY089414-1|AAL90152.1| 195|Drosophila melanogaster AT23593p pro... 28 8.2
AY051735-1|AAK93159.1| 387|Drosophila melanogaster LD26258p pro... 28 8.2
AE014296-518|AAF47694.1| 387|Drosophila melanogaster CG9972-PA ... 28 8.2
AE014135-137|AAS64601.1| 8647|Drosophila melanogaster CG32019-PE... 28 8.2
AE014135-136|AAS64600.1| 8648|Drosophila melanogaster CG32019-PC... 28 8.2
AE014135-135|AAS64599.1| 8930|Drosophila melanogaster CG32019-PD... 28 8.2
AE014135-134|AAF59316.4| 8943|Drosophila melanogaster CG32019-PA... 28 8.2
>AE014297-465|AAN13380.1| 1573|Drosophila melanogaster CG10272-PC,
isoform C protein.
Length = 1573
Score = 30.3 bits (65), Expect = 2.0
Identities = 37/123 (30%), Positives = 51/123 (41%), Gaps = 6/123 (4%)
Frame = +3
Query: 210 HFRHKQNHS*QRCPQHTQCISGHFRPSNKLIAPIA-AHGQR--ARLSL---PHQTDAIQC 371
H H +H R PQH Q H N+ AP A +H QR +R L P QT ++
Sbjct: 1239 HHHHHHHHPQHRLPQHVQHQHPHQHHPNEFKAPPADSHLQRSSSREQLIVEPPQTQPLEL 1298
Query: 372 SQTKLPRDQRAHARRCSKRTAAKPPFT*SHENLESSRSGHTLGRRRLSFVYRRHISTRYN 551
LPR A++ R +PP S + SS+ +T RRH+S
Sbjct: 1299 ----LPRASSANSDYSGYR--IRPP---SRPSSNSSQPDYT-QVSPAKMALRRHLSQEKL 1348
Query: 552 QRH 560
+H
Sbjct: 1349 SQH 1351
>AE014297-464|AAN13379.1| 1848|Drosophila melanogaster CG10272-PD,
isoform D protein.
Length = 1848
Score = 30.3 bits (65), Expect = 2.0
Identities = 37/123 (30%), Positives = 51/123 (41%), Gaps = 6/123 (4%)
Frame = +3
Query: 210 HFRHKQNHS*QRCPQHTQCISGHFRPSNKLIAPIA-AHGQR--ARLSL---PHQTDAIQC 371
H H +H R PQH Q H N+ AP A +H QR +R L P QT ++
Sbjct: 1239 HHHHHHHHPQHRLPQHVQHQHPHQHHPNEFKAPPADSHLQRSSSREQLIVEPPQTQPLEL 1298
Query: 372 SQTKLPRDQRAHARRCSKRTAAKPPFT*SHENLESSRSGHTLGRRRLSFVYRRHISTRYN 551
LPR A++ R +PP S + SS+ +T RRH+S
Sbjct: 1299 ----LPRASSANSDYSGYR--IRPP---SRPSSNSSQPDYT-QVSPAKMALRRHLSQEKL 1348
Query: 552 QRH 560
+H
Sbjct: 1349 SQH 1351
>AE014297-463|AAN13378.1| 1848|Drosophila melanogaster CG10272-PB,
isoform B protein.
Length = 1848
Score = 30.3 bits (65), Expect = 2.0
Identities = 37/123 (30%), Positives = 51/123 (41%), Gaps = 6/123 (4%)
Frame = +3
Query: 210 HFRHKQNHS*QRCPQHTQCISGHFRPSNKLIAPIA-AHGQR--ARLSL---PHQTDAIQC 371
H H +H R PQH Q H N+ AP A +H QR +R L P QT ++
Sbjct: 1239 HHHHHHHHPQHRLPQHVQHQHPHQHHPNEFKAPPADSHLQRSSSREQLIVEPPQTQPLEL 1298
Query: 372 SQTKLPRDQRAHARRCSKRTAAKPPFT*SHENLESSRSGHTLGRRRLSFVYRRHISTRYN 551
LPR A++ R +PP S + SS+ +T RRH+S
Sbjct: 1299 ----LPRASSANSDYSGYR--IRPP---SRPSSNSSQPDYT-QVSPAKMALRRHLSQEKL 1348
Query: 552 QRH 560
+H
Sbjct: 1349 SQH 1351
>AE014297-462|AAF54122.2| 1848|Drosophila melanogaster CG10272-PA,
isoform A protein.
Length = 1848
Score = 30.3 bits (65), Expect = 2.0
Identities = 37/123 (30%), Positives = 51/123 (41%), Gaps = 6/123 (4%)
Frame = +3
Query: 210 HFRHKQNHS*QRCPQHTQCISGHFRPSNKLIAPIA-AHGQR--ARLSL---PHQTDAIQC 371
H H +H R PQH Q H N+ AP A +H QR +R L P QT ++
Sbjct: 1239 HHHHHHHHPQHRLPQHVQHQHPHQHHPNEFKAPPADSHLQRSSSREQLIVEPPQTQPLEL 1298
Query: 372 SQTKLPRDQRAHARRCSKRTAAKPPFT*SHENLESSRSGHTLGRRRLSFVYRRHISTRYN 551
LPR A++ R +PP S + SS+ +T RRH+S
Sbjct: 1299 ----LPRASSANSDYSGYR--IRPP---SRPSSNSSQPDYT-QVSPAKMALRRHLSQEKL 1348
Query: 552 QRH 560
+H
Sbjct: 1349 SQH 1351
>AF492764-1|AAM11673.1| 417|Drosophila melanogaster gag protein
protein.
Length = 417
Score = 29.9 bits (64), Expect = 2.7
Identities = 24/95 (25%), Positives = 36/95 (37%), Gaps = 2/95 (2%)
Frame = +1
Query: 163 NRYQPGYQLSNNRFVSTSDINRITRNNDVPNIRNVFQGISDPQINSLRQLRRMDNVPD-- 336
NR+ P + N F T + NN V R G + I LR + N P+
Sbjct: 288 NRFGPNQTYTPNNFPPTGNTQT---NNPVKRQRPSDSGQTKMSIEELRYQEMVSNQPEYP 344
Query: 337 FHYHTKQTRSNAVRQNFPETNVRTPEGVQNALQQN 441
+HY+ N Q +P P+ Q +Q+
Sbjct: 345 YHYYYPYYPDNFQPQPYPYQMSYIPDPTQIPFEQD 379
>AY075429-1|AAL68245.1| 1384|Drosophila melanogaster LD47780p
protein.
Length = 1384
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 367 NAVRQNFPETNVRTPEGVQNALQQNPRLH 453
N ++ NF E N+ P G Q A Q RL+
Sbjct: 845 NNLQSNFSELNINKPSGYQGASNQQSRLN 873
>AE014135-123|AAX52511.1| 1384|Drosophila melanogaster CG31992-PH,
isoform H protein.
Length = 1384
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 367 NAVRQNFPETNVRTPEGVQNALQQNPRLH 453
N ++ NF E N+ P G Q A Q RL+
Sbjct: 845 NNLQSNFSELNINKPSGYQGASNQQSRLN 873
>AE014135-122|AAX52510.1| 1384|Drosophila melanogaster CG31992-PG,
isoform G protein.
Length = 1384
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 367 NAVRQNFPETNVRTPEGVQNALQQNPRLH 453
N ++ NF E N+ P G Q A Q RL+
Sbjct: 845 NNLQSNFSELNINKPSGYQGASNQQSRLN 873
>AE014135-121|AAN06509.1| 1384|Drosophila melanogaster CG31992-PF,
isoform F protein.
Length = 1384
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 367 NAVRQNFPETNVRTPEGVQNALQQNPRLH 453
N ++ NF E N+ P G Q A Q RL+
Sbjct: 845 NNLQSNFSELNINKPSGYQGASNQQSRLN 873
>AE014135-120|AAN06508.1| 1384|Drosophila melanogaster CG31992-PE,
isoform E protein.
Length = 1384
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 367 NAVRQNFPETNVRTPEGVQNALQQNPRLH 453
N ++ NF E N+ P G Q A Q RL+
Sbjct: 845 NNLQSNFSELNINKPSGYQGASNQQSRLN 873
>AE014135-119|AAN06507.1| 1384|Drosophila melanogaster CG31992-PD,
isoform D protein.
Length = 1384
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 367 NAVRQNFPETNVRTPEGVQNALQQNPRLH 453
N ++ NF E N+ P G Q A Q RL+
Sbjct: 845 NNLQSNFSELNINKPSGYQGASNQQSRLN 873
>AE014135-118|AAF59324.2| 1384|Drosophila melanogaster CG31992-PC,
isoform C protein.
Length = 1384
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 367 NAVRQNFPETNVRTPEGVQNALQQNPRLH 453
N ++ NF E N+ P G Q A Q RL+
Sbjct: 845 NNLQSNFSELNINKPSGYQGASNQQSRLN 873
>AE014135-117|AAF59322.2| 1384|Drosophila melanogaster CG31992-PB,
isoform B protein.
Length = 1384
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 367 NAVRQNFPETNVRTPEGVQNALQQNPRLH 453
N ++ NF E N+ P G Q A Q RL+
Sbjct: 845 NNLQSNFSELNINKPSGYQGASNQQSRLN 873
>AE014135-116|AAF59323.2| 1384|Drosophila melanogaster CG31992-PA,
isoform A protein.
Length = 1384
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 367 NAVRQNFPETNVRTPEGVQNALQQNPRLH 453
N ++ NF E N+ P G Q A Q RL+
Sbjct: 845 NNLQSNFSELNINKPSGYQGASNQQSRLN 873
>BT021306-1|AAX33454.1| 745|Drosophila melanogaster RE19569p
protein.
Length = 745
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +1
Query: 190 SNNRFVSTSDINRITRNNDV----PNIRNVFQGISDPQINSLRQLRRMDNVPDFHYHTKQ 357
+N F + + +TR ++ + N+F+ I D L+++ +DN D +
Sbjct: 64 ANTNFKTVTKSKNVTRYGNIHIREQQLLNIFEVIIDTLEGKLKRIDSLDNTVDLLMKNME 123
Query: 358 TRSNAVRQNFPETN 399
T N V N +T+
Sbjct: 124 TLQNRVVNNVLKTD 137
>AY089414-1|AAL90152.1| 195|Drosophila melanogaster AT23593p
protein.
Length = 195
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 350 PNRRDPMQSDKTSQRPTCARPKVFKTHCS 436
P R+ M+ K +P C +PK K CS
Sbjct: 166 PRPRNSMECGKPKAKPRCLKPKSSKPKCS 194
>AY051735-1|AAK93159.1| 387|Drosophila melanogaster LD26258p
protein.
Length = 387
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +2
Query: 389 QRPTCARP-KVFKTHCSKTPVYII 457
Q PTCARP K + H P Y+I
Sbjct: 53 QTPTCARPGKTYCEHADNYPTYLI 76
>AE014296-518|AAF47694.1| 387|Drosophila melanogaster CG9972-PA
protein.
Length = 387
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +2
Query: 389 QRPTCARP-KVFKTHCSKTPVYII 457
Q PTCARP K + H P Y+I
Sbjct: 53 QTPTCARPGKTYCEHADNYPTYLI 76
>AE014135-137|AAS64601.1| 8647|Drosophila melanogaster CG32019-PE,
isoform E protein.
Length = 8647
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +2
Query: 488 AYSWPAAVIFCLPPPH*YKI*STPSIEPAEVI 583
AYS + +IFC PPH KI S SI VI
Sbjct: 6552 AYSGSSDLIFCRRPPHAPKITSDLSIRDMTVI 6583
>AE014135-136|AAS64600.1| 8648|Drosophila melanogaster CG32019-PC,
isoform C protein.
Length = 8648
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +2
Query: 488 AYSWPAAVIFCLPPPH*YKI*STPSIEPAEVI 583
AYS + +IFC PPH KI S SI VI
Sbjct: 6553 AYSGSSDLIFCRRPPHAPKITSDLSIRDMTVI 6584
>AE014135-135|AAS64599.1| 8930|Drosophila melanogaster CG32019-PD,
isoform D protein.
Length = 8930
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +2
Query: 488 AYSWPAAVIFCLPPPH*YKI*STPSIEPAEVI 583
AYS + +IFC PPH KI S SI VI
Sbjct: 6835 AYSGSSDLIFCRRPPHAPKITSDLSIRDMTVI 6866
>AE014135-134|AAF59316.4| 8943|Drosophila melanogaster CG32019-PA,
isoform A protein.
Length = 8943
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +2
Query: 488 AYSWPAAVIFCLPPPH*YKI*STPSIEPAEVI 583
AYS + +IFC PPH KI S SI VI
Sbjct: 6848 AYSGSSDLIFCRRPPHAPKITSDLSIRDMTVI 6879
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,426,489
Number of Sequences: 53049
Number of extensions: 666472
Number of successful extensions: 1783
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1782
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2358819486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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