Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19f01
(678 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 95 6e-20
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 95 6e-20
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 94 2e-19
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 91 1e-18
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 89 4e-18
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 89 5e-18
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 87 2e-17
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 87 3e-17
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 84 2e-16
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 75 9e-14
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 75 9e-14
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 75 9e-14
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 75 9e-14
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 74 2e-13
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 74 2e-13
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 72 6e-13
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 71 1e-12
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 70 3e-12
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 70 3e-12
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 70 3e-12
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 70 3e-12
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 70 3e-12
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 69 6e-12
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 53 3e-07
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 32 0.83
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 31 1.9
DQ228799-1|ABB54752.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 5.8
DQ228798-1|ABB54751.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 5.8
DQ228797-1|ABB54750.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 5.8
DQ228796-1|ABB54749.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 5.8
DQ228795-1|ABB54748.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 5.8
DQ228794-1|ABB54747.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 5.8
DQ228793-1|ABB54746.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 5.8
DQ228792-1|ABB54745.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 5.8
BT011073-1|AAR82738.1| 1640|Drosophila melanogaster SD11113p pro... 29 5.8
AE013599-2513|AAF57830.2| 1722|Drosophila melanogaster CG6493-PA... 29 5.8
AB073024-1|BAB69959.1| 1722|Drosophila melanogaster double-stran... 29 5.8
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 95.5 bits (227), Expect = 6e-20
Identities = 61/179 (34%), Positives = 92/179 (51%)
Frame = -2
Query: 656 YRPVSLLPIFSKIIEKIIYEAINSYFEKHNLFTQEQKGFRRNKSINMAVHDLLKPIYYNL 477
YRP+SLL SKI+EK+I + + + HN Q GFR + + L I ++
Sbjct: 538 YRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTILPTLKLRNYIKESI 597
Query: 476 DNRTPTATLYMDMTKAFD*VDHKTLLDKLNAYGIRGNVHKLLKSYLTDRYQRVEIDNICP 297
++ + +D+ AFD V H LL KL G + K+++++LT RY V +++
Sbjct: 598 QSKQSVGLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQS 657
Query: 296 LSRTVQSYHSNWMKMQFGVPQGSVLGPLLFLIYINDFPKAIEHPMILFADDSTVIYKNF 120
R + + GVPQGSVLGP LF I+ +D P+A + LFADD+ V F
Sbjct: 658 ARRILNA----------GVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADDAAVYSAGF 706
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 95.5 bits (227), Expect = 6e-20
Identities = 61/179 (34%), Positives = 92/179 (51%)
Frame = -2
Query: 656 YRPVSLLPIFSKIIEKIIYEAINSYFEKHNLFTQEQKGFRRNKSINMAVHDLLKPIYYNL 477
YRP+SLL SKI+EK+I + + + HN Q GFR + + L I ++
Sbjct: 486 YRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTILPTLKLRNYIKESI 545
Query: 476 DNRTPTATLYMDMTKAFD*VDHKTLLDKLNAYGIRGNVHKLLKSYLTDRYQRVEIDNICP 297
++ + +D+ AFD V H LL KL G + K+++++LT RY V +++
Sbjct: 546 QSKQSVGLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQS 605
Query: 296 LSRTVQSYHSNWMKMQFGVPQGSVLGPLLFLIYINDFPKAIEHPMILFADDSTVIYKNF 120
R + + GVPQGSVLGP LF I+ +D P+A + LFADD+ V F
Sbjct: 606 ARRILNA----------GVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADDAAVYSAGF 654
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 93.9 bits (223), Expect = 2e-19
Identities = 59/178 (33%), Positives = 90/178 (50%)
Frame = -2
Query: 656 YRPVSLLPIFSKIIEKIIYEAINSYFEKHNLFTQEQKGFRRNKSINMAVHDLLKPIYYNL 477
YRP+SLL SK+ EK + +N + HN+ Q GFR + V+ + I
Sbjct: 511 YRPISLLSCISKLFEKCLLIRLNQHQTYHNIIPAHQFGFRESHGTIEQVNRITTEIRTAF 570
Query: 476 DNRTPTATLYMDMTKAFD*VDHKTLLDKLNAYGIRGNVHKLLKSYLTDRYQRVEIDNICP 297
+ R +++D+++AFD V L+ K+ + + HKLLKSYL DR V +
Sbjct: 571 EYREYCTAVFLDVSQAFDKVWLDGLMFKIK-ISLPESTHKLLKSYLYDRKFAVRCNTATS 629
Query: 296 LSRTVQSYHSNWMKMQFGVPQGSVLGPLLFLIYINDFPKAIEHPMILFADDSTVIYKN 123
T+++ GVPQGSVLGP L+LIY D P + FADD+ ++ ++
Sbjct: 630 TVHTIEA----------GVPQGSVLGPTLYLIYTADIPTNSRLTVSTFADDTAILSRS 677
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 91.5 bits (217), Expect = 1e-18
Identities = 59/185 (31%), Positives = 91/185 (49%)
Frame = -2
Query: 677 DKEXIACYRPVSLLPIFSKIIEKIIYEAINSYFEKHNLFTQEQKGFRRNKSINMAVHDLL 498
DK + YRP+SLL SK+ EK++ I+ + +N Q GFR V+ +
Sbjct: 502 DKTQPSSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRIT 561
Query: 497 KPIYYNLDNRTPTATLYMDMTKAFD*VDHKTLLDKLNAYGIRGNVHKLLKSYLTDRYQRV 318
I ++R +++D+ +AFD V LL K+ + N HKLLKSYL +R +
Sbjct: 562 SEIRTAFEHREYCTAIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNRVFAI 620
Query: 317 EIDNICPLSRTVQSYHSNWMKMQFGVPQGSVLGPLLFLIYINDFPKAIEHPMILFADDST 138
D +++ GVPQGSVLGP+L+ +Y DFP FADD+
Sbjct: 621 RCDTSTSRDCAIEA----------GVPQGSVLGPILYTLYTADFPIDYNLTTSTFADDTA 670
Query: 137 VIYKN 123
++ ++
Sbjct: 671 ILSRS 675
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 89.4 bits (212), Expect = 4e-18
Identities = 56/158 (35%), Positives = 80/158 (50%)
Frame = -2
Query: 656 YRPVSLLPIFSKIIEKIIYEAINSYFEKHNLFTQEQKGFRRNKSINMAVHDLLKPIYYNL 477
YRP+SLL SK+ E++I +N + + Q GFR+ S VH L K I
Sbjct: 514 YRPISLLSSLSKLWERLIANRLNDIMTERRILPDHQFGFRQGHSTVEQVHRLTKHILQAF 573
Query: 476 DNRTPTATLYMDMTKAFD*VDHKTLLDKLNAYGIRGNVHKLLKSYLTDRYQRVEIDNICP 297
D++ +++DM +AFD V H L+ K+ + +LKSYL DR V + N
Sbjct: 574 DDKEYCNAVFIDMQQAFDRVWHDGLISKVKKL-FPAPYYGVLKSYLEDRRFMVRVRNSYS 632
Query: 296 LSRTVQSYHSNWMKMQFGVPQGSVLGPLLFLIYINDFP 183
+ R M+ GVPQGSVLGPLL+ ++ D P
Sbjct: 633 IPRV----------MRAGVPQGSVLGPLLYSVFTADLP 660
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 89.0 bits (211), Expect = 5e-18
Identities = 58/185 (31%), Positives = 90/185 (48%)
Frame = -2
Query: 677 DKEXIACYRPVSLLPIFSKIIEKIIYEAINSYFEKHNLFTQEQKGFRRNKSINMAVHDLL 498
DK + YRP+SLL SK+ EK++ I+ + +N Q GFR V+ +
Sbjct: 502 DKTQPSSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRIT 561
Query: 497 KPIYYNLDNRTPTATLYMDMTKAFD*VDHKTLLDKLNAYGIRGNVHKLLKSYLTDRYQRV 318
I ++R +++D+ +AFD V LL K+ + N HKLLKSYL + +
Sbjct: 562 SEIRTAFEHREYCTAIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNTVFAI 620
Query: 317 EIDNICPLSRTVQSYHSNWMKMQFGVPQGSVLGPLLFLIYINDFPKAIEHPMILFADDST 138
D +++ GVPQGSVLGP+L+ +Y DFP FADD+
Sbjct: 621 RCDTSTSRDCAIEA----------GVPQGSVLGPILYTLYTADFPIDYNLTTSTFADDTA 670
Query: 137 VIYKN 123
++ ++
Sbjct: 671 ILSRS 675
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 87.0 bits (206), Expect = 2e-17
Identities = 57/178 (32%), Positives = 88/178 (49%)
Frame = -2
Query: 656 YRPVSLLPIFSKIIEKIIYEAINSYFEKHNLFTQEQKGFRRNKSINMAVHDLLKPIYYNL 477
YRP+SLL SK+ EK + I+ + + HN Q F V+ + I
Sbjct: 50 YRPISLLTCLSKLFEKGLLLRISPHLKTHNTLPSYQFDFPAKHGAIEQVNRITTEIRTAF 109
Query: 476 DNRTPTATLYMDMTKAFD*VDHKTLLDKLNAYGIRGNVHKLLKSYLTDRYQRVEIDNICP 297
++R L++D+ +AFD V L+ K+ + N+HKLLKSYL R V +
Sbjct: 110 EHREYCTALFLDVAQAFDRVWLDGLMFKIIQL-LPQNIHKLLKSYLDKRVFAVRCSSSTS 168
Query: 296 LSRTVQSYHSNWMKMQFGVPQGSVLGPLLFLIYINDFPKAIEHPMILFADDSTVIYKN 123
T+++ GVPQGSVLGP+L+ +Y D P + + FADD+ +I ++
Sbjct: 169 SDFTIEA----------GVPQGSVLGPILYTLYTADIPTNYQLTIFTFADDTAIISRS 216
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 86.6 bits (205), Expect = 3e-17
Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 4/184 (2%)
Frame = -2
Query: 665 IACYRPVSLLPIFSKIIEKIIYEAINSYFEKHNLFTQEQKGFRRNKSINMAVHDLLKPIY 486
I YRP+SLL K +EKII + + + ++HNL + Q F+ N S A+ +
Sbjct: 510 INSYRPISLLSCLGKTLEKIIAQRLTWFIKRHNLISHNQVAFKSNHSTMDALLRIQHFAS 569
Query: 485 YNLDNRTPTATLYMDMTKAFD*VDHKTLLDKLNAYGIRGNVHKLLKSYLTDRYQRVEIDN 306
L + + L D +AFD V +L +L +GI ++ L+K+++T+R RV I+N
Sbjct: 570 NALSTKNHVSILATDFERAFDRVGIHAVLCRLERWGIGPRLYNLIKAFMTNRSFRVRINN 629
Query: 305 ICPLSRTVQSYHSNWMKMQFGVPQGSVLGPLLFLIYINDFPKAI-EHPMI---LFADDST 138
+ SN + G+PQGS L +LF+I I D + H I L+ADD+
Sbjct: 630 VT----------SNSHILHNGIPQGSPLSVVLFMIAIEDINDIVTRHKDIYISLYADDAI 679
Query: 137 VIYK 126
+ K
Sbjct: 680 IFTK 683
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 83.8 bits (198), Expect = 2e-16
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 5/185 (2%)
Frame = -2
Query: 662 ACYRPVSLLPIFSKIIEKIIYEAINSYFEKHNLFTQEQKGFRRNKSINMAVHDLLKPIYY 483
A YRP+SLLP SK+ E++I I S E + + Q GFR +H +++ I
Sbjct: 511 ASYRPISLLPSISKVFERLIAVRIVSIMEAQGITPEHQFGFRAGHCTVEQLHRVVEQILT 570
Query: 482 NLDNRTPTATLYMDMTKAFD*VDHKTLLDKLNAYGIRGNVHKLLKSYLTDRYQRVEIDNI 303
D++ +L++D+ +AFD V H L K+ + LLKSYL R V +
Sbjct: 571 AYDSKEYCNSLFLDIREAFDRVWHIGLQLKIK-QTLPAPYFGLLKSYLEGRRFAVRFHS- 628
Query: 302 CPLSRTVQSYHSNWMKMQFGVPQGSVLGPLLFLIYINDFPKAI-----EHPMILFADDST 138
+ + H+ + GVPQGSVLGPLL+ +Y +D P+ + + FADD
Sbjct: 629 -----AISTEHN----VAAGVPQGSVLGPLLYCLYSHDMPQPDVSLYGKSMLATFADDVC 679
Query: 137 VIYKN 123
V Y++
Sbjct: 680 VTYRS 684
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 74.9 bits (176), Expect = 9e-14
Identities = 51/182 (28%), Positives = 87/182 (47%)
Frame = -2
Query: 656 YRPVSLLPIFSKIIEKIIYEAINSYFEKHNLFTQEQKGFRRNKSINMAVHDLLKPIYYNL 477
YRP+SLLP KI+E++I + + + + Q GFR +H ++ +
Sbjct: 317 YRPISLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAM 376
Query: 476 DNRTPTATLYMDMTKAFD*VDHKTLLDKLNAYGIRGNVHKLLKSYLTDRYQRVEIDNICP 297
+N+ ++D+ +AFD V H LL K ++ ++KS+L +R V +D
Sbjct: 377 ENKEYAVGAFLDIQQAFDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVD---- 431
Query: 296 LSRTVQSYHSNWMKMQFGVPQGSVLGPLLFLIYINDFPKAIEHPMILFADDSTVIYKNFE 117
Y S+ + GVPQGSVLGP L+ ++ +D P H + D+ V+ +
Sbjct: 432 ------GYKSSIKPIAAGVPQGSVLGPTLYSVFASDMP---THTPVTEVDEEDVLIATYA 482
Query: 116 DN 111
D+
Sbjct: 483 DD 484
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 74.9 bits (176), Expect = 9e-14
Identities = 52/161 (32%), Positives = 82/161 (50%)
Frame = -2
Query: 656 YRPVSLLPIFSKIIEKIIYEAINSYFEKHNLFTQEQKGFRRNKSINMAVHDLLKPIYYNL 477
YRP+SLL SK++E+I+ + + Q GFR++ + + + I
Sbjct: 114 YRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAF 173
Query: 476 DNRTPTATLYMDMTKAFD*VDHKTLLDKLNAYGIRGNVHKLLKSYLTDRYQRVEIDNICP 297
D + + ++D+T+AFD V H LL KL+ I + LL++YL++R V ID
Sbjct: 174 DEKDVCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDG--- 229
Query: 296 LSRTVQSYHSNWMKMQFGVPQGSVLGPLLFLIYINDFPKAI 174
S ++ GVPQGS+LGP+L+ IY +D P I
Sbjct: 230 ------ETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPI 264
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 74.9 bits (176), Expect = 9e-14
Identities = 52/161 (32%), Positives = 82/161 (50%)
Frame = -2
Query: 656 YRPVSLLPIFSKIIEKIIYEAINSYFEKHNLFTQEQKGFRRNKSINMAVHDLLKPIYYNL 477
YRP+SLL SK++E+I+ + + Q GFR++ + + + I
Sbjct: 561 YRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAF 620
Query: 476 DNRTPTATLYMDMTKAFD*VDHKTLLDKLNAYGIRGNVHKLLKSYLTDRYQRVEIDNICP 297
D + + ++D+T+AFD V H LL KL+ I + LL++YL++R V ID
Sbjct: 621 DEKDVCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDG--- 676
Query: 296 LSRTVQSYHSNWMKMQFGVPQGSVLGPLLFLIYINDFPKAI 174
S ++ GVPQGS+LGP+L+ IY +D P I
Sbjct: 677 ------ETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPI 711
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 74.9 bits (176), Expect = 9e-14
Identities = 52/161 (32%), Positives = 82/161 (50%)
Frame = -2
Query: 656 YRPVSLLPIFSKIIEKIIYEAINSYFEKHNLFTQEQKGFRRNKSINMAVHDLLKPIYYNL 477
YRP+SLL SK++E+I+ + + Q GFR++ + + + I
Sbjct: 561 YRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAF 620
Query: 476 DNRTPTATLYMDMTKAFD*VDHKTLLDKLNAYGIRGNVHKLLKSYLTDRYQRVEIDNICP 297
D + + ++D+T+AFD V H LL KL+ I + LL++YL++R V ID
Sbjct: 621 DEKDVCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDG--- 676
Query: 296 LSRTVQSYHSNWMKMQFGVPQGSVLGPLLFLIYINDFPKAI 174
S ++ GVPQGS+LGP+L+ IY +D P I
Sbjct: 677 ------ETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPI 711
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 74.1 bits (174), Expect = 2e-13
Identities = 52/161 (32%), Positives = 82/161 (50%)
Frame = -2
Query: 656 YRPVSLLPIFSKIIEKIIYEAINSYFEKHNLFTQEQKGFRRNKSINMAVHDLLKPIYYNL 477
YRP+SLL SK++E+I+ + + Q GFR++ + + + I
Sbjct: 561 YRPISLLSGLSKLLERILPKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAF 620
Query: 476 DNRTPTATLYMDMTKAFD*VDHKTLLDKLNAYGIRGNVHKLLKSYLTDRYQRVEIDNICP 297
D + + ++D+T+AFD V H LL KL+ I + LL++YL++R V ID
Sbjct: 621 DEKDVCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDG--- 676
Query: 296 LSRTVQSYHSNWMKMQFGVPQGSVLGPLLFLIYINDFPKAI 174
S ++ GVPQGS+LGP+L+ IY +D P I
Sbjct: 677 ------ETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPI 711
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 73.7 bits (173), Expect = 2e-13
Identities = 51/182 (28%), Positives = 86/182 (47%)
Frame = -2
Query: 656 YRPVSLLPIFSKIIEKIIYEAINSYFEKHNLFTQEQKGFRRNKSINMAVHDLLKPIYYNL 477
YRP SLLP KI+E++I + + + + Q GFR +H ++ +
Sbjct: 515 YRPTSLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAM 574
Query: 476 DNRTPTATLYMDMTKAFD*VDHKTLLDKLNAYGIRGNVHKLLKSYLTDRYQRVEIDNICP 297
+N+ ++D+ +AFD V H LL K ++ ++KS+L +R V +D
Sbjct: 575 ENKEYAVGAFLDIQQAFDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVD---- 629
Query: 296 LSRTVQSYHSNWMKMQFGVPQGSVLGPLLFLIYINDFPKAIEHPMILFADDSTVIYKNFE 117
Y S+ + GVPQGSVLGP L+ ++ +D P H + D+ V+ +
Sbjct: 630 ------GYKSSIKPIAAGVPQGSVLGPTLYSVFASDMP---THTPVTEVDEEDVLIATYA 680
Query: 116 DN 111
D+
Sbjct: 681 DD 682
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 72.1 bits (169), Expect = 6e-13
Identities = 53/158 (33%), Positives = 84/158 (53%)
Frame = -2
Query: 656 YRPVSLLPIFSKIIEKIIYEAINSYFEKHNLFTQEQKGFRRNKSINMAVHDLLKPIYYNL 477
YRP+SLL SKI E+++ + + Q GFR+ + + + I
Sbjct: 558 YRPISLLSGLSKIFERLLLKRLFKVDLFKKAIPLHQFGFRKEHGSEQQIARVTQFILEAF 617
Query: 476 DNRTPTATLYMDMTKAFD*VDHKTLLDKLNAYGIRGNVHKLLKSYLTDRYQRVEIDNICP 297
+ + + +++D+++AFD V H+ LL KL A + N++ +L+SYLT+R V+ D
Sbjct: 618 ERKEYCSAVFLDISEAFDRVWHEGLLLKL-AKILPYNLYIILESYLTNRTFEVK-DQAGE 675
Query: 296 LSRTVQSYHSNWMKMQFGVPQGSVLGPLLFLIYINDFP 183
SRT Q + GVPQGS LGPLL+ I+ +D P
Sbjct: 676 TSRTGQ--------IGAGVPQGSNLGPLLYSIFSSDMP 705
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 70.9 bits (166), Expect = 1e-12
Identities = 52/158 (32%), Positives = 84/158 (53%)
Frame = -2
Query: 656 YRPVSLLPIFSKIIEKIIYEAINSYFEKHNLFTQEQKGFRRNKSINMAVHDLLKPIYYNL 477
YRP+SLL SK+ E+++ + + Q GFR+ + + + I
Sbjct: 570 YRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAF 629
Query: 476 DNRTPTATLYMDMTKAFD*VDHKTLLDKLNAYGIRGNVHKLLKSYLTDRYQRVEIDNICP 297
+ + + +++D+++AFD V H+ LL KL A + N++ +L+SYLT+R V+ D
Sbjct: 630 ERKEYCSAVFLDISEAFDRVWHEGLLLKL-AKILPYNLYIILESYLTNRTFEVK-DQAGE 687
Query: 296 LSRTVQSYHSNWMKMQFGVPQGSVLGPLLFLIYINDFP 183
SRT Q + GVPQGS LGPLL+ I+ +D P
Sbjct: 688 TSRTGQ--------IGAGVPQGSNLGPLLYSIFSSDMP 717
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 70.1 bits (164), Expect = 3e-12
Identities = 59/194 (30%), Positives = 97/194 (50%), Gaps = 8/194 (4%)
Frame = -2
Query: 656 YRPVSLLPIFSKIIEKIIYEAINSYFEKHNLFTQEQKGFRRNKSINMAVHDLLKPIYYNL 477
YRP+SLL SK+ E+++ + + Q GFR+ + + + I
Sbjct: 442 YRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAF 501
Query: 476 DNRTPTATLYMDMTKAFD*VDHKTLLDKLNAYGIRGNVHKLLKSYLTDRYQRVEIDNICP 297
+ + + +++D+++AFD V H+ LL KL A + N++ +L+SYLT+R V+ D
Sbjct: 502 ERKEYCSAVFLDISEAFDRVWHEGLLLKL-AKILPYNLYIILESYLTNRTFEVK-DQAGE 559
Query: 296 LSRTVQSYHSNWMKMQFGVPQGSVLGPLLFLIYINDFP-KAIEHP-------MILFADDS 141
SR Q + GVPQGS LGP+L+ I+ +D P I HP + +ADD+
Sbjct: 560 TSRAGQ--------IGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDT 611
Query: 140 TVIYKNFEDNRFTR 99
V+ + TR
Sbjct: 612 IVLSSDILATAATR 625
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 70.1 bits (164), Expect = 3e-12
Identities = 59/194 (30%), Positives = 97/194 (50%), Gaps = 8/194 (4%)
Frame = -2
Query: 656 YRPVSLLPIFSKIIEKIIYEAINSYFEKHNLFTQEQKGFRRNKSINMAVHDLLKPIYYNL 477
YRP+SLL SK+ E+++ + + Q GFR+ + + + I
Sbjct: 558 YRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAF 617
Query: 476 DNRTPTATLYMDMTKAFD*VDHKTLLDKLNAYGIRGNVHKLLKSYLTDRYQRVEIDNICP 297
+ + + +++D+++AFD V H+ LL KL A + N++ +L+SYLT+R V+ D
Sbjct: 618 ERKEYCSAVFLDISEAFDRVWHEGLLLKL-AKILPYNLYIILESYLTNRTFEVK-DQAGE 675
Query: 296 LSRTVQSYHSNWMKMQFGVPQGSVLGPLLFLIYINDFP-KAIEHP-------MILFADDS 141
SR Q + GVPQGS LGP+L+ I+ +D P I HP + +ADD+
Sbjct: 676 TSRAGQ--------IGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDT 727
Query: 140 TVIYKNFEDNRFTR 99
V+ + TR
Sbjct: 728 IVLSSDILATAATR 741
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 70.1 bits (164), Expect = 3e-12
Identities = 59/194 (30%), Positives = 97/194 (50%), Gaps = 8/194 (4%)
Frame = -2
Query: 656 YRPVSLLPIFSKIIEKIIYEAINSYFEKHNLFTQEQKGFRRNKSINMAVHDLLKPIYYNL 477
YRP+SLL SK+ E+++ + + Q GFR+ + + + I
Sbjct: 558 YRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAF 617
Query: 476 DNRTPTATLYMDMTKAFD*VDHKTLLDKLNAYGIRGNVHKLLKSYLTDRYQRVEIDNICP 297
+ + + +++D+++AFD V H+ LL KL A + N++ +L+SYLT+R V+ D
Sbjct: 618 ERKEYCSAVFLDISEAFDRVWHEGLLLKL-AKILPYNLYIILESYLTNRTFEVK-DQAGE 675
Query: 296 LSRTVQSYHSNWMKMQFGVPQGSVLGPLLFLIYINDFP-KAIEHP-------MILFADDS 141
SR Q + GVPQGS LGP+L+ I+ +D P I HP + +ADD+
Sbjct: 676 TSRAGQ--------IGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDT 727
Query: 140 TVIYKNFEDNRFTR 99
V+ + TR
Sbjct: 728 IVLSSDILATAATR 741
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 70.1 bits (164), Expect = 3e-12
Identities = 59/194 (30%), Positives = 97/194 (50%), Gaps = 8/194 (4%)
Frame = -2
Query: 656 YRPVSLLPIFSKIIEKIIYEAINSYFEKHNLFTQEQKGFRRNKSINMAVHDLLKPIYYNL 477
YRP+SLL SK+ E+++ + + Q GFR+ + + + I
Sbjct: 520 YRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAF 579
Query: 476 DNRTPTATLYMDMTKAFD*VDHKTLLDKLNAYGIRGNVHKLLKSYLTDRYQRVEIDNICP 297
+ + + +++D+++AFD V H+ LL KL A + N++ +L+SYLT+R V+ D
Sbjct: 580 ERKEYCSAVFLDISEAFDRVWHEGLLLKL-AKILPYNLYIILESYLTNRTFEVK-DQAGE 637
Query: 296 LSRTVQSYHSNWMKMQFGVPQGSVLGPLLFLIYINDFP-KAIEHP-------MILFADDS 141
SR Q + GVPQGS LGP+L+ I+ +D P I HP + +ADD+
Sbjct: 638 TSRAGQ--------IGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDT 689
Query: 140 TVIYKNFEDNRFTR 99
V+ + TR
Sbjct: 690 IVLSSDILATAATR 703
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 70.1 bits (164), Expect = 3e-12
Identities = 59/194 (30%), Positives = 97/194 (50%), Gaps = 8/194 (4%)
Frame = -2
Query: 656 YRPVSLLPIFSKIIEKIIYEAINSYFEKHNLFTQEQKGFRRNKSINMAVHDLLKPIYYNL 477
YRP+SLL SK+ E+++ + + Q GFR+ + + + I
Sbjct: 558 YRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAF 617
Query: 476 DNRTPTATLYMDMTKAFD*VDHKTLLDKLNAYGIRGNVHKLLKSYLTDRYQRVEIDNICP 297
+ + + +++D+++AFD V H+ LL KL A + N++ +L+SYLT+R V+ D
Sbjct: 618 ERKEYCSAVFLDISEAFDRVWHEGLLLKL-AKILPYNLYIILESYLTNRTFEVK-DQAGE 675
Query: 296 LSRTVQSYHSNWMKMQFGVPQGSVLGPLLFLIYINDFP-KAIEHP-------MILFADDS 141
SR Q + GVPQGS LGP+L+ I+ +D P I HP + +ADD+
Sbjct: 676 TSRAGQ--------IGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDT 727
Query: 140 TVIYKNFEDNRFTR 99
V+ + TR
Sbjct: 728 IVLSSDILATAATR 741
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 68.9 bits (161), Expect = 6e-12
Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 4/198 (2%)
Frame = -2
Query: 677 DKEXIACYRPVSLLPIFSKIIEKIIYEAINSYFEKHNLFTQEQKGFRRNKSINMAVHDLL 498
DK + YRP+SL +KI++KII + + +NL +Q GF++ KS + LL
Sbjct: 501 DKTKTSSYRPISLNCCIAKILDKIIAKRLWWLVTYNNLINDKQFGFKKGKSTSDC---LL 557
Query: 497 KPIYYNLDNRTPTATLYMDMTKAFD*VDHKTLLDKLNAYGIRGNVHKLLKSYLTDRYQRV 318
Y ++ T+ + +D ++AFD V +++ +L + + K +K+++++R
Sbjct: 558 YVDYLITKSKMHTSLVTLDFSRAFDRVGVHSIIQQLQEWKTGPKIIKYIKNFMSNR---- 613
Query: 317 EIDNICPLSRTVQSYHSNWMKMQFGVPQGSVLGPLLFLIYINDFPKAIE-HPMILF---A 150
++ V + S+ + + G+PQGS + +LFLI N I H I F A
Sbjct: 614 ------KITVRVGPHTSSPLPLFNGIPQGSPISVILFLIAFNKLSNIISLHKEIKFNAYA 667
Query: 149 DDSTVIYKNFEDNRFTRF 96
DD +I NF N T F
Sbjct: 668 DDFFLII-NFNKNTNTNF 684
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 53.2 bits (122), Expect = 3e-07
Identities = 51/186 (27%), Positives = 82/186 (44%), Gaps = 12/186 (6%)
Frame = -2
Query: 656 YRPVSLLPIFSKIIEKIIYEAINSYFEKHNLFTQEQKGFRRNKSINMAVHDLLKPIYYNL 477
YRP+ LL I K+ E+I+Y I E +Q GFR+ KS A+ + L
Sbjct: 479 YRPLCLLDIVGKLFERILYARIELITESPTGLQGQQYGFRKGKSTLDALKSVTDAARKAL 538
Query: 476 D-------NRTPTATLYMDMTKAFD*VDHKTLLDKLNAYGIRGNVHKLLKSYLTDRYQRV 318
D ++ A + +D+ AF+ +L + G+ + ++ +Y DR
Sbjct: 539 DGNRWLGGSKKYCAIITLDVKNAFNTARWPIILGAMRNLGVPDYIRGVIGNYFRDRVLWY 598
Query: 317 EIDNICPLSRTVQSYHSNWMKMQFGVPQGSVLGPLLFLIYINDF-----PKAIEHPMILF 153
++ P S V + GVPQGSVLGP+L+ I + P+ +E + F
Sbjct: 599 VTED-GPRSHQVSA----------GVPQGSVLGPILWNIMYDGILSISKPRGVE--LHCF 645
Query: 152 ADDSTV 135
ADD +
Sbjct: 646 ADDVAI 651
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 31.9 bits (69), Expect = 0.83
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Frame = -2
Query: 656 YRPVSLLPIFSKIIEKIIYEAINSYFEKHNLFTQEQKGFRRNKSI--NMAVHDLLKPIYY 483
+RP+S+ + + + I+ +NS + Q+GF N + DL+ + +
Sbjct: 415 FRPISVPSVLVRQLNAILATRLNSSIN----WDPRQRGFLPTDGCADNATIVDLV--LRH 468
Query: 482 NLDNRTPTATLYMDMTKAFD*VDHKTLLDKLNAYGI-RGNVHKLLKSY 342
+ + +D++KAFD + H ++ D L AYG +G V + +Y
Sbjct: 469 SHKHFRSCYIANLDVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQNTY 516
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 30.7 bits (66), Expect = 1.9
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = -2
Query: 245 GVPQGSVLGPLLF-LIY--INDFPKAIEHPMILFADDSTVI 132
GVPQGSVLGPLL+ +Y I P ++ FADD ++
Sbjct: 50 GVPQGSVLGPLLWNTMYDGILRLPLVGRSEIVGFADDVALL 90
>DQ228799-1|ABB54752.1| 1715|Drosophila melanogaster Dicer-2 protein.
Length = 1715
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = -2
Query: 335 DRYQRVEIDNICPLSRTVQSYHSNWMKMQFGVPQGSVLG 219
D Y + N+C ++ W K QF +P G++ G
Sbjct: 1101 DYYYHFSVGNVCEMNEMDFEDKEYWAKNQFHMPTGNIYG 1139
>DQ228798-1|ABB54751.1| 1715|Drosophila melanogaster Dicer-2 protein.
Length = 1715
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = -2
Query: 335 DRYQRVEIDNICPLSRTVQSYHSNWMKMQFGVPQGSVLG 219
D Y + N+C ++ W K QF +P G++ G
Sbjct: 1101 DYYYHFSVGNVCEMNEMDFEDKEYWAKNQFHMPTGNIYG 1139
>DQ228797-1|ABB54750.1| 1715|Drosophila melanogaster Dicer-2 protein.
Length = 1715
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = -2
Query: 335 DRYQRVEIDNICPLSRTVQSYHSNWMKMQFGVPQGSVLG 219
D Y + N+C ++ W K QF +P G++ G
Sbjct: 1101 DYYYHFSVGNVCEMNEMDFEDKEYWAKNQFHMPTGNIYG 1139
>DQ228796-1|ABB54749.1| 1715|Drosophila melanogaster Dicer-2 protein.
Length = 1715
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = -2
Query: 335 DRYQRVEIDNICPLSRTVQSYHSNWMKMQFGVPQGSVLG 219
D Y + N+C ++ W K QF +P G++ G
Sbjct: 1101 DYYYHFSVGNVCEMNEMDFEDKEYWAKNQFHMPTGNIYG 1139
>DQ228795-1|ABB54748.1| 1715|Drosophila melanogaster Dicer-2 protein.
Length = 1715
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = -2
Query: 335 DRYQRVEIDNICPLSRTVQSYHSNWMKMQFGVPQGSVLG 219
D Y + N+C ++ W K QF +P G++ G
Sbjct: 1101 DYYYHFSVGNVCEMNEMDFEDKEYWAKNQFHMPTGNIYG 1139
>DQ228794-1|ABB54747.1| 1715|Drosophila melanogaster Dicer-2 protein.
Length = 1715
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = -2
Query: 335 DRYQRVEIDNICPLSRTVQSYHSNWMKMQFGVPQGSVLG 219
D Y + N+C ++ W K QF +P G++ G
Sbjct: 1101 DYYYHFSVGNVCEMNEMDFEDKEYWAKNQFHMPTGNIYG 1139
>DQ228793-1|ABB54746.1| 1715|Drosophila melanogaster Dicer-2 protein.
Length = 1715
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = -2
Query: 335 DRYQRVEIDNICPLSRTVQSYHSNWMKMQFGVPQGSVLG 219
D Y + N+C ++ W K QF +P G++ G
Sbjct: 1101 DYYYHFSVGNVCEMNEMDFEDKEYWAKNQFHMPTGNIYG 1139
>DQ228792-1|ABB54745.1| 1715|Drosophila melanogaster Dicer-2 protein.
Length = 1715
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = -2
Query: 335 DRYQRVEIDNICPLSRTVQSYHSNWMKMQFGVPQGSVLG 219
D Y + N+C ++ W K QF +P G++ G
Sbjct: 1101 DYYYHFSVGNVCEMNEMDFEDKEYWAKNQFHMPTGNIYG 1139
>BT011073-1|AAR82738.1| 1640|Drosophila melanogaster SD11113p protein.
Length = 1640
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = -2
Query: 335 DRYQRVEIDNICPLSRTVQSYHSNWMKMQFGVPQGSVLG 219
D Y + N+C ++ W K QF +P G++ G
Sbjct: 1087 DYYYHFSVGNVCEMNEMDFEDKEYWAKNQFHMPTGNIYG 1125
>AE013599-2513|AAF57830.2| 1722|Drosophila melanogaster CG6493-PA
protein.
Length = 1722
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = -2
Query: 335 DRYQRVEIDNICPLSRTVQSYHSNWMKMQFGVPQGSVLG 219
D Y + N+C ++ W K QF +P G++ G
Sbjct: 1108 DYYYHFSVGNVCEMNEMDFEDKEYWAKNQFHMPTGNIYG 1146
>AB073024-1|BAB69959.1| 1722|Drosophila melanogaster
double-strand-specific ribonucleaseprotein.
Length = 1722
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = -2
Query: 335 DRYQRVEIDNICPLSRTVQSYHSNWMKMQFGVPQGSVLG 219
D Y + N+C ++ W K QF +P G++ G
Sbjct: 1108 DYYYHFSVGNVCEMNEMDFEDKEYWAKNQFHMPTGNIYG 1146
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,186,989
Number of Sequences: 53049
Number of extensions: 478250
Number of successful extensions: 984
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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