Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19e20
         (280 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   1.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   1.1  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    20   4.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    20   4.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    20   5.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    19   9.9  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    19   9.9  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -3

Query: 242 ECLRRLIKCVANPAILFLRGLVGMIAISSHILLFVSKSSVNLV 114
           +CL +L K  +    L L G     AI S IL+FV    +++V
Sbjct: 143 KCLYKLWKMPSLSEFLSLFGTETCPAIGSAILIFVVLPELDVV 185


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -3

Query: 242 ECLRRLIKCVANPAILFLRGLVGMIAISSHILLFVSKSSVNLV 114
           +CL +L K  +    L L G     AI S IL+FV    +++V
Sbjct: 143 KCLYKLWKMPSLSEFLSLFGTETCPAIGSAILIFVVLPELDVV 185


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 20.2 bits (40), Expect = 4.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 160 LHIFFYLYQNQVLILYSI 107
           LH+FF+   N++L  Y +
Sbjct: 118 LHVFFFTLFNKLLGQYPV 135


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 4.3
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 258 DSSHLRVSETPH 223
           D+SH R+SE P+
Sbjct: 302 DTSHNRISEIPN 313


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 5.7
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 102 NNNLRRFLDGFSPDTTHG*SCTALLLTESKRS 7
           NNN++R +       +   S TALL T S+ S
Sbjct: 80  NNNIQRVVPEIKIQISQQQSVTALLDTGSEVS 111


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 19.0 bits (37), Expect = 9.9
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = -1

Query: 163 FLHIFFYLYQNQVLILYSIFQ 101
           + +  FY+    +L +YS+F+
Sbjct: 55  YFYFSFYITSYTLLSVYSLFR 75


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 19.0 bits (37), Expect = 9.9
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = -1

Query: 163 FLHIFFYLYQNQVLILYSIFQ 101
           + +  FY+    +L +YS+F+
Sbjct: 55  YFYFSFYITSYTLLSVYSLFR 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,332
Number of Sequences: 336
Number of extensions: 900
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4684108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)