Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19e20
         (280 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M18000-1|AAA60285.1|  135|Homo sapiens RPS17 protein.                  98   5e-21
M13932-1|AAA60284.1|  135|Homo sapiens RPS17 protein.                  98   5e-21
BC071928-1|AAH71928.1|  135|Homo sapiens ribosomal protein S17 p...    98   5e-21
BC070222-1|AAH70222.1|  135|Homo sapiens ribosomal protein S17 p...    98   5e-21
BC062715-1|AAH62715.1|  135|Homo sapiens ribosomal protein S17 p...    98   5e-21
BC049824-1|AAH49824.1|  135|Homo sapiens ribosomal protein S17 p...    98   5e-21
BC022370-1|AAH22370.1|  135|Homo sapiens ribosomal protein S17 p...    98   5e-21
BC019899-1|AAH19899.1|  135|Homo sapiens ribosomal protein S17 p...    98   5e-21
BC009407-1|AAH09407.1|  135|Homo sapiens ribosomal protein S17 p...    98   5e-21
AK026570-1|BAB15501.1|  135|Homo sapiens atory regulatory compon...    98   5e-21
AL049693-2|CAB89564.1|  135|Homo sapiens protein ( Human DNA seq...    83   1e-16
U83661-1|AAB71758.2| 1437|Homo sapiens multidrug resistance prot...    27   8.0  
BC009221-1|AAH09221.2|  324|Homo sapiens TNPO3 protein protein.        27   8.0  
AY196484-1|AAO49801.1| 1394|Homo sapiens ATP-binding cassette C5...    27   8.0  
AL590005-2|CAI14989.1| 7543|Homo sapiens dystonin protein.             27   8.0  
AL512448-1|CAI16609.1| 7543|Homo sapiens dystonin protein.             27   8.0  
AL512422-2|CAI14341.1| 7543|Homo sapiens dystonin protein.             27   8.0  
AL137008-2|CAI20330.1| 7543|Homo sapiens dystonin protein.             27   8.0  
AL096710-2|CAI22044.1| 7543|Homo sapiens dystonin protein.             27   8.0  
AJ133769-1|CAB42643.1|  923|Homo sapiens nuclear transport recep...    27   8.0  
AF146074-1|AAD37716.1| 1437|Homo sapiens ABC protein protein.          27   8.0  
AF145029-1|AAD38537.1|  975|Homo sapiens transportin-SR protein.       27   8.0  
AF104942-1|AAD04169.1| 1437|Homo sapiens ABC transporter MOAT-C ...    27   8.0  
AB209454-1|BAD92691.1| 1430|Homo sapiens Multidrug resistance-as...    27   8.0  
AB209103-1|BAD92340.1|  799|Homo sapiens ATP-binding cassette C5...    27   8.0  

>M18000-1|AAA60285.1|  135|Homo sapiens RPS17 protein.
          Length = 135

 Score = 97.9 bits (233), Expect = 5e-21
 Identities = 45/59 (76%), Positives = 51/59 (86%)
 Frame = +1

Query: 100 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQE 276
           IEKYYTRL  DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++   VRGISIKLQE
Sbjct: 17  IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQE 75


>M13932-1|AAA60284.1|  135|Homo sapiens RPS17 protein.
          Length = 135

 Score = 97.9 bits (233), Expect = 5e-21
 Identities = 45/59 (76%), Positives = 51/59 (86%)
 Frame = +1

Query: 100 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQE 276
           IEKYYTRL  DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++   VRGISIKLQE
Sbjct: 17  IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQE 75


>BC071928-1|AAH71928.1|  135|Homo sapiens ribosomal protein S17
           protein.
          Length = 135

 Score = 97.9 bits (233), Expect = 5e-21
 Identities = 45/59 (76%), Positives = 51/59 (86%)
 Frame = +1

Query: 100 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQE 276
           IEKYYTRL  DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++   VRGISIKLQE
Sbjct: 17  IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQE 75


>BC070222-1|AAH70222.1|  135|Homo sapiens ribosomal protein S17
           protein.
          Length = 135

 Score = 97.9 bits (233), Expect = 5e-21
 Identities = 45/59 (76%), Positives = 51/59 (86%)
 Frame = +1

Query: 100 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQE 276
           IEKYYTRL  DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++   VRGISIKLQE
Sbjct: 17  IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQE 75


>BC062715-1|AAH62715.1|  135|Homo sapiens ribosomal protein S17
           protein.
          Length = 135

 Score = 97.9 bits (233), Expect = 5e-21
 Identities = 45/59 (76%), Positives = 51/59 (86%)
 Frame = +1

Query: 100 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQE 276
           IEKYYTRL  DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++   VRGISIKLQE
Sbjct: 17  IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQE 75


>BC049824-1|AAH49824.1|  135|Homo sapiens ribosomal protein S17
           protein.
          Length = 135

 Score = 97.9 bits (233), Expect = 5e-21
 Identities = 45/59 (76%), Positives = 51/59 (86%)
 Frame = +1

Query: 100 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQE 276
           IEKYYTRL  DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++   VRGISIKLQE
Sbjct: 17  IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQE 75


>BC022370-1|AAH22370.1|  135|Homo sapiens ribosomal protein S17
           protein.
          Length = 135

 Score = 97.9 bits (233), Expect = 5e-21
 Identities = 45/59 (76%), Positives = 51/59 (86%)
 Frame = +1

Query: 100 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQE 276
           IEKYYTRL  DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++   VRGISIKLQE
Sbjct: 17  IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQE 75


>BC019899-1|AAH19899.1|  135|Homo sapiens ribosomal protein S17
           protein.
          Length = 135

 Score = 97.9 bits (233), Expect = 5e-21
 Identities = 45/59 (76%), Positives = 51/59 (86%)
 Frame = +1

Query: 100 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQE 276
           IEKYYTRL  DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++   VRGISIKLQE
Sbjct: 17  IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQE 75


>BC009407-1|AAH09407.1|  135|Homo sapiens ribosomal protein S17
           protein.
          Length = 135

 Score = 97.9 bits (233), Expect = 5e-21
 Identities = 45/59 (76%), Positives = 51/59 (86%)
 Frame = +1

Query: 100 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQE 276
           IEKYYTRL  DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++   VRGISIKLQE
Sbjct: 17  IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQE 75


>AK026570-1|BAB15501.1|  135|Homo sapiens atory regulatory component
           Gs of adenylyl  protein.
          Length = 135

 Score = 97.9 bits (233), Expect = 5e-21
 Identities = 45/59 (76%), Positives = 51/59 (86%)
 Frame = +1

Query: 100 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQE 276
           IEKYYTRL  DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++   VRGISIKLQE
Sbjct: 17  IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQE 75


>AL049693-2|CAB89564.1|  135|Homo sapiens protein ( Human DNA
           sequence from clone RP4-753D5 on chromosome 6p12.1-12.3 
           Contains the 3' end of the TFAP2B gene for transcription
           factor AP-2 sium/caltranscription factor AP-2 beta
           (activating enhancer binding protein 2 beta)).
          Length = 135

 Score = 83.4 bits (197), Expect = 1e-16
 Identities = 38/59 (64%), Positives = 46/59 (77%)
 Frame = +1

Query: 100 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQE 276
           IEKYY  L  DF TNK +C+EIAIIP+K L NK AG+ THLM++++   VRGISIKLQE
Sbjct: 17  IEKYYMHLGNDFHTNKHMCKEIAIIPSKKLHNKTAGYVTHLMKQIQRGPVRGISIKLQE 75


>U83661-1|AAB71758.2| 1437|Homo sapiens multidrug resistance protein
           5 protein.
          Length = 1437

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = -3

Query: 239 CLRRLIKCVANPAILFLRGLVGMIAISSHILLFVSKSSVNLV*YFSIIIFAAFLTVLVRT 60
           C  RLI  +    I  L G  G   +  H+L +   +  NL  Y  +++    LT +VR+
Sbjct: 175 CRTRLILSIVCLMITQLAGFSGPAFMVKHLLEYTQATESNLQ-YSLLLVLGLLLTEIVRS 233

Query: 59  RPMA 48
             +A
Sbjct: 234 WSLA 237


>BC009221-1|AAH09221.2|  324|Homo sapiens TNPO3 protein protein.
          Length = 324

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -3

Query: 257 IPRTCECLRRLIKCVANPAILFLRGLVGMIAISSHI 150
           + R C CLR  ++CV   +   L+ LV  +    H+
Sbjct: 74  VERCCRCLRFAVRCVGKGSAALLQPLVTQMVNVYHV 109


>AY196484-1|AAO49801.1| 1394|Homo sapiens ATP-binding cassette C5
           splicing variant A protein.
          Length = 1394

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = -3

Query: 239 CLRRLIKCVANPAILFLRGLVGMIAISSHILLFVSKSSVNLV*YFSIIIFAAFLTVLVRT 60
           C  RLI  +    I  L G  G   +  H+L +   +  NL  Y  +++    LT +VR+
Sbjct: 175 CRTRLILSIVCLMITQLAGFSGPAFMVKHLLEYTQATESNLQ-YSLLLVLGLLLTEIVRS 233

Query: 59  RPMA 48
             +A
Sbjct: 234 WSLA 237


>AL590005-2|CAI14989.1| 7543|Homo sapiens dystonin protein.
          Length = 7543

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +2

Query: 110  TIQD*HLILIQIKEYVKKSLSFLPSLL 190
            +++D  ++ +Q  EYVKK L FL ++L
Sbjct: 3535 SVKDIEIVNVQDSEYVKKRLEFLKNVL 3561


>AL512448-1|CAI16609.1| 7543|Homo sapiens dystonin protein.
          Length = 7543

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +2

Query: 110  TIQD*HLILIQIKEYVKKSLSFLPSLL 190
            +++D  ++ +Q  EYVKK L FL ++L
Sbjct: 3535 SVKDIEIVNVQDSEYVKKRLEFLKNVL 3561


>AL512422-2|CAI14341.1| 7543|Homo sapiens dystonin protein.
          Length = 7543

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +2

Query: 110  TIQD*HLILIQIKEYVKKSLSFLPSLL 190
            +++D  ++ +Q  EYVKK L FL ++L
Sbjct: 3535 SVKDIEIVNVQDSEYVKKRLEFLKNVL 3561


>AL137008-2|CAI20330.1| 7543|Homo sapiens dystonin protein.
          Length = 7543

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +2

Query: 110  TIQD*HLILIQIKEYVKKSLSFLPSLL 190
            +++D  ++ +Q  EYVKK L FL ++L
Sbjct: 3535 SVKDIEIVNVQDSEYVKKRLEFLKNVL 3561


>AL096710-2|CAI22044.1| 7543|Homo sapiens dystonin protein.
          Length = 7543

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +2

Query: 110  TIQD*HLILIQIKEYVKKSLSFLPSLL 190
            +++D  ++ +Q  EYVKK L FL ++L
Sbjct: 3535 SVKDIEIVNVQDSEYVKKRLEFLKNVL 3561


>AJ133769-1|CAB42643.1|  923|Homo sapiens nuclear transport receptor
           protein.
          Length = 923

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -3

Query: 257 IPRTCECLRRLIKCVANPAILFLRGLVGMIAISSHI 150
           + R C CLR  ++CV   +   L+ LV  +    H+
Sbjct: 659 VERCCRCLRFAVRCVGKGSAALLQPLVTQMVNVYHV 694


>AF146074-1|AAD37716.1| 1437|Homo sapiens ABC protein protein.
          Length = 1437

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = -3

Query: 239 CLRRLIKCVANPAILFLRGLVGMIAISSHILLFVSKSSVNLV*YFSIIIFAAFLTVLVRT 60
           C  RLI  +    I  L G  G   +  H+L +   +  NL  Y  +++    LT +VR+
Sbjct: 175 CRTRLILSIVCLMITQLAGFSGPAFMVKHLLEYTQATESNLQ-YSLLLVLGLLLTEIVRS 233

Query: 59  RPMA 48
             +A
Sbjct: 234 WSLA 237


>AF145029-1|AAD38537.1|  975|Homo sapiens transportin-SR protein.
          Length = 975

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -3

Query: 257 IPRTCECLRRLIKCVANPAILFLRGLVGMIAISSHI 150
           + R C CLR  ++CV   +   L+ LV  +    H+
Sbjct: 693 VERCCRCLRFAVRCVGKGSAALLQPLVTQMVNVYHV 728


>AF104942-1|AAD04169.1| 1437|Homo sapiens ABC transporter MOAT-C
           protein.
          Length = 1437

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = -3

Query: 239 CLRRLIKCVANPAILFLRGLVGMIAISSHILLFVSKSSVNLV*YFSIIIFAAFLTVLVRT 60
           C  RLI  +    I  L G  G   +  H+L +   +  NL  Y  +++    LT +VR+
Sbjct: 175 CRTRLILSIVCLMITQLAGFSGPAFMVKHLLEYTQATESNLQ-YSLLLVLGLLLTEIVRS 233

Query: 59  RPMA 48
             +A
Sbjct: 234 WSLA 237


>AB209454-1|BAD92691.1| 1430|Homo sapiens Multidrug
           resistance-associated protein 5 variant protein.
          Length = 1430

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = -3

Query: 239 CLRRLIKCVANPAILFLRGLVGMIAISSHILLFVSKSSVNLV*YFSIIIFAAFLTVLVRT 60
           C  RLI  +    I  L G  G   +  H+L +   +  NL  Y  +++    LT +VR+
Sbjct: 168 CRTRLILSIVCLMITQLAGFSGPAFMVKHLLEYTQATESNLQ-YSLLLVLGLLLTEIVRS 226

Query: 59  RPMA 48
             +A
Sbjct: 227 WSLA 230


>AB209103-1|BAD92340.1|  799|Homo sapiens ATP-binding cassette C5
           splicing variant A variant protein.
          Length = 799

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = -3

Query: 239 CLRRLIKCVANPAILFLRGLVGMIAISSHILLFVSKSSVNLV*YFSIIIFAAFLTVLVRT 60
           C  RLI  +    I  L G  G   +  H+L +   +  NL  Y  +++    LT +VR+
Sbjct: 73  CRTRLILSIVCLMITQLAGFSGPAFMVKHLLEYTQATESNLQ-YSLLLVLGLLLTEIVRS 131

Query: 59  RPMA 48
             +A
Sbjct: 132 WSLA 135


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,468,769
Number of Sequences: 237096
Number of extensions: 486215
Number of successful extensions: 700
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 76,859,062
effective HSP length: 70
effective length of database: 60,262,342
effective search space used: 1325771524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)