BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19e19
(381 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 23 3.8
AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 23 3.8
Z49833-1|CAA89994.1| 250|Anopheles gambiae serine proteinase pr... 22 6.6
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 22 6.6
AJ459962-1|CAD31061.1| 685|Anopheles gambiae prophenoloxidase 9... 22 8.7
>AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 23.0 bits (47), Expect = 3.8
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -3
Query: 193 KLGLSYQKRQAQEAPSRT*TRGEAMGSSRQLHGCRRSLFRTGQ 65
K G+S + A PSR TR A G RQ H R R GQ
Sbjct: 100 KRGISQRSSDAGGEPSRRWTRSGATG-RRQPHPYRAG--RVGQ 139
>AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 23.0 bits (47), Expect = 3.8
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -3
Query: 193 KLGLSYQKRQAQEAPSRT*TRGEAMGSSRQLHGCRRSLFRTGQ 65
K G+S + A PSR TR A G RQ H R R GQ
Sbjct: 100 KRGISQRSSDAGGEPSRRWTRSGATG-RRQPHPYRAG--RVGQ 139
>Z49833-1|CAA89994.1| 250|Anopheles gambiae serine proteinase
protein.
Length = 250
Score = 22.2 bits (45), Expect = 6.6
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = +3
Query: 162 AWRF**DSPSFCNIYCRTRKYARW 233
+W F P F IY R ++ W
Sbjct: 215 SWGFGCAQPRFPGIYARVNRFISW 238
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 22.2 bits (45), Expect = 6.6
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 243 YTPTIGRTYVYDNKY 199
+ PTI RTY D +Y
Sbjct: 2059 FVPTINRTYSIDYEY 2073
>AJ459962-1|CAD31061.1| 685|Anopheles gambiae prophenoloxidase 9
protein.
Length = 685
Score = 21.8 bits (44), Expect = 8.7
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = -1
Query: 270 KPINMPNYSYTPTIGR 223
KP+ +P++ YT + R
Sbjct: 63 KPVELPDFGYTARVPR 78
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 415,100
Number of Sequences: 2352
Number of extensions: 7822
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29074284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -