Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19e14
         (314 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   1.8  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    20   5.4  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    20   5.4  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    20   7.1  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    20   7.1  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    19   9.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    19   9.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    19   9.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    19   9.4  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    19   9.4  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    19   9.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 95  IFAFYCVFDNFSKRYFFHNCGYN 27
           I+ FYC F  F+    F  C Y+
Sbjct: 146 IYYFYCAFIIFTVHLLFLLCIYH 168


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 259 W*KNIDMLRSIIRRFKST 312
           W K++ + + I+  FKST
Sbjct: 15  WGKSLSIPQQILNEFKST 32


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 210 TTYDVVGKRDYNKFDKLVKKY 272
           T YD +   +  K D+L+K Y
Sbjct: 26  TKYDNIDLEEILKSDRLLKNY 46


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 210 TTYDVVGKRDYNKFDKLVKKY 272
           T YD V   +  K D+L+K Y
Sbjct: 26  TKYDNVDLDEIIKSDRLLKNY 46


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 5/13 (38%), Positives = 7/13 (53%)
 Frame = -3

Query: 183 KFCNIHLNSILHW 145
           + C  H N I+ W
Sbjct: 295 ELCEFHKNGIIEW 307


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 210 TTYDVVGKRDYNKFDKLVKKY 272
           T YD +      K D+L+K Y
Sbjct: 24  TKYDNIDLNQILKSDRLLKNY 44


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 77  VFDNFSKRYFFHN 39
           +FDNFS  +  HN
Sbjct: 85  LFDNFSAAFQDHN 97


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 77  VFDNFSKRYFFHN 39
           +FDNFS  +  HN
Sbjct: 318 LFDNFSAAFQDHN 330


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 77  VFDNFSKRYFFHN 39
           +FDNFS  +  HN
Sbjct: 318 LFDNFSAAFQDHN 330


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +1

Query: 187 KQIKWASTLRTTWSASEITINLTNW*KNIDMLRSIIRRF 303
           K+  WA T+    +AS I  ++  W  +   L    +RF
Sbjct: 135 KRSFWAVTIFLVLAASVIFFDVVVWGLSASDLGVFFKRF 173


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 210 TTYDVVGKRDYNKFDKLVKKY 272
           T YD +      K D+L+K Y
Sbjct: 24  TKYDNIDLNQILKSDRLLKNY 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,772
Number of Sequences: 336
Number of extensions: 1219
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5836655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)