Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19e14
         (314 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-557|AAF51147.1|  993|Drosophila melanogaster CG9660-PB,...    28   2.2  
AY069668-1|AAL39813.1|  330|Drosophila melanogaster LD44494p pro...    27   3.8  
AE013599-200|AAM70808.1|  326|Drosophila melanogaster CG3271-PA,...    27   3.8  
AE013599-199|AAM70807.1|  330|Drosophila melanogaster CG3271-PB,...    27   3.8  

>AE014134-557|AAF51147.1|  993|Drosophila melanogaster CG9660-PB,
           isoform B protein.
          Length = 993

 Score = 28.3 bits (60), Expect = 2.2
 Identities = 11/45 (24%), Positives = 25/45 (55%)
 Frame = +3

Query: 177 KTFEANKVGQHTTYDVVGKRDYNKFDKLVKKY*HVAINHTTFQEY 311
           ++  A+K    +TY +    D+ +F +++K + +V +    FQ+Y
Sbjct: 15  QSLNAHKDASTSTYPLPSVADWKEFQQMLKNHKNVQVKRYGFQDY 59


>AY069668-1|AAL39813.1|  330|Drosophila melanogaster LD44494p
          protein.
          Length = 330

 Score = 27.5 bits (58), Expect = 3.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 80 CVFDNFSKRYFFHNCGYNC 24
          C+  N  +  FFHNC  NC
Sbjct: 20 CLASNGDRTQFFHNCRQNC 38


>AE013599-200|AAM70808.1|  326|Drosophila melanogaster CG3271-PA,
          isoform A protein.
          Length = 326

 Score = 27.5 bits (58), Expect = 3.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 80 CVFDNFSKRYFFHNCGYNC 24
          C+  N  +  FFHNC  NC
Sbjct: 20 CLASNGDRTQFFHNCRQNC 38


>AE013599-199|AAM70807.1|  330|Drosophila melanogaster CG3271-PB,
          isoform B protein.
          Length = 330

 Score = 27.5 bits (58), Expect = 3.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 80 CVFDNFSKRYFFHNCGYNC 24
          C+  N  +  FFHNC  NC
Sbjct: 20 CLASNGDRTQFFHNCRQNC 38


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,440,989
Number of Sequences: 53049
Number of extensions: 176419
Number of successful extensions: 299
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 299
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 631882260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)