Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19e12
(309 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 128 8e-31
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 128 8e-31
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 128 8e-31
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 128 8e-31
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 128 8e-31
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 127 2e-30
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 127 2e-30
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 127 2e-30
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 127 2e-30
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 127 2e-30
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 127 2e-30
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 127 2e-30
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 127 2e-30
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 127 2e-30
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 127 2e-30
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 127 2e-30
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 127 2e-30
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 127 2e-30
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 127 2e-30
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 127 2e-30
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 127 2e-30
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 126 3e-30
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 114 1e-26
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 101 1e-22
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 81 2e-16
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 69 5e-13
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 66 6e-12
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 62 6e-11
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 55 8e-09
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 55 1e-08
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 53 3e-08
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 53 5e-08
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 51 2e-07
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 50 3e-07
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 50 3e-07
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 47 2e-06
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 47 2e-06
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 47 2e-06
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 47 3e-06
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 46 4e-06
At5g57860.3 68418.m07237 ubiquitin family protein contains Pfam ... 46 5e-06
At5g57860.2 68418.m07236 ubiquitin family protein contains Pfam ... 46 5e-06
At5g57860.1 68418.m07235 ubiquitin family protein contains Pfam ... 46 5e-06
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 45 9e-06
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 45 9e-06
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 44 2e-05
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 44 3e-05
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 43 4e-05
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 43 5e-05
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 42 1e-04
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 41 1e-04
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 40 5e-04
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 39 6e-04
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 38 0.001
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 35 0.013
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 33 0.030
At3g01050.1 68416.m00006 expressed protein 33 0.030
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 33 0.030
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 33 0.052
At5g12280.1 68418.m01444 hypothetical protein 32 0.068
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 31 0.16
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 30 0.28
At2g32360.1 68415.m03955 ubiquitin family protein contains INTER... 30 0.28
At2g35360.1 68415.m04335 ubiquitin family protein contains INTER... 30 0.36
At4g05240.1 68417.m00791 ubiquitin family protein contains INTER... 28 1.1
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 28 1.5
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 27 1.9
At5g63420.1 68418.m07962 metallo-beta-lactamase family protein 27 2.6
At2g31960.1 68415.m03905 glycosyl transferase family 48 protein ... 27 2.6
At3g44110.1 68416.m04727 DNAJ heat shock protein, putative (J3) ... 26 4.5
At3g17080.1 68416.m02179 self-incompatibility protein-related si... 26 5.9
At3g44110.2 68416.m04728 DNAJ heat shock protein, putative (J3) ... 25 7.8
At1g80260.1 68414.m09396 tubulin family protein 25 7.8
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 128 bits (309), Expect = 8e-31
Identities = 58/77 (75%), Positives = 69/77 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 208 IQKESTLHMVLRLRGGY 258
IQKESTLH+VLRLRGG+
Sbjct: 213 IQKESTLHLVLRLRGGF 229
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 128 bits (309), Expect = 8e-31
Identities = 58/77 (75%), Positives = 69/77 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 208 IQKESTLHMVLRLRGGY 258
IQKESTLH+VLRLRGG+
Sbjct: 289 IQKESTLHLVLRLRGGF 305
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 128 bits (309), Expect = 8e-31
Identities = 58/77 (75%), Positives = 69/77 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 208 IQKESTLHMVLRLRGGY 258
IQKESTLH+VLRLRGG+
Sbjct: 213 IQKESTLHLVLRLRGGF 229
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 128 bits (309), Expect = 8e-31
Identities = 58/77 (75%), Positives = 69/77 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 208 IQKESTLHMVLRLRGGY 258
IQKESTLH+VLRLRGG+
Sbjct: 289 IQKESTLHLVLRLRGGF 305
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 128 bits (309), Expect = 8e-31
Identities = 59/76 (77%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ +LK KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 121 bits (291), Expect = 1e-28
Identities = 56/76 (73%), Positives = 66/76 (86%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+ DQQRLIFAGKQ ED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYN 212
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 110 bits (265), Expect = 2e-25
Identities = 49/76 (64%), Positives = 63/76 (82%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKT E E ++T+ ++K KI D EG+P DQ RLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 208 IQKESTLHMVLRLRGG 255
+Q++STLH++LR RGG
Sbjct: 61 VQEDSTLHLLLRFRGG 76
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 50.0 bits (114), Expect = 3e-07
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKE 129
MQIF+KTLTGKTIT E E ++T+ ++K KI DKE
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
Score = 28.7 bits (61), Expect = 0.84
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 191 LWPITIFKRNLLFTW 235
LWP T +R+LLFTW
Sbjct: 283 LWPTTTSRRSLLFTW 297
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 50.0 bits (114), Expect = 3e-07
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKE 129
MQIF+KTLTGKTIT E E ++T+ ++K KI DKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 28.7 bits (61), Expect = 0.84
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 191 LWPITIFKRNLLFTW 235
LWP T +R+LLFTW
Sbjct: 435 LWPTTTSRRSLLFTW 449
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 50.0 bits (114), Expect = 3e-07
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKE 129
MQIF+KTLTGKTIT E E ++T+ ++K KI DKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 28.7 bits (61), Expect = 0.84
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 191 LWPITIFKRNLLFTW 235
LWP T +R+LLFTW
Sbjct: 359 LWPTTTSRRSLLFTW 373
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 50.0 bits (114), Expect = 3e-07
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKE 129
MQIF+KTLTGKTIT E E ++T+ ++K KI DKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 28.7 bits (61), Expect = 0.84
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 191 LWPITIFKRNLLFTW 235
LWP T +R+LLFTW
Sbjct: 435 LWPTTTSRRSLLFTW 449
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 50.0 bits (114), Expect = 3e-07
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKE 129
MQIF+KTLTGKTIT E E ++T+ ++K KI DKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 28.7 bits (61), Expect = 0.84
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 191 LWPITIFKRNLLFTW 235
LWP T +R+LLFTW
Sbjct: 359 LWPTTTSRRSLLFTW 373
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 89.4 bits (212), Expect = 4e-19
Identities = 41/74 (55%), Positives = 54/74 (72%)
Frame = +1
Query: 34 IFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQ 213
I +KTLTGK I + EP +T+ +K+++ +KEG+P QQRLI+AGKQL D KT DY I+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIE 138
Query: 214 KESTLHMVLRLRGG 255
S LH+VL LRGG
Sbjct: 139 GGSVLHLVLALRGG 152
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 124 bits (298), Expect = 2e-29
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKE +P DQQRLIFAGKQLED +T+ADYN
Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 211
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 212 IQKESTLHLVLRLRGG 227
Score = 120 bits (288), Expect = 3e-28
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+AD N
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-N 135
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 136 IQKESTLHLVLRLRGG 151
Score = 79.8 bits (188), Expect = 3e-16
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLE 180
MQIF+KTLTGKTIT E E + T+ ++K KI DKEG+P DQQRLIFAGKQLE
Sbjct: 228 MQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 278
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 93.9 bits (223), Expect = 2e-20
Identities = 42/75 (56%), Positives = 56/75 (74%)
Frame = +1
Query: 34 IFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQ 213
I +KTLTGK I + EP +T+ +K+++ +KEG+P QQRLI+AGKQL D KT DYNI+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 138
Query: 214 KESTLHMVLRLRGGY 258
S LH+VL LRGG+
Sbjct: 139 GGSVLHLVLALRGGF 153
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 127 bits (306), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 126 bits (304), Expect = 3e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEGVP DQQRLIFAGKQL+D +T+ADYN
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 139 IQKESTLHLVLRLRGG 154
Score = 116 bits (279), Expect = 3e-27
Identities = 54/76 (71%), Positives = 64/76 (84%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF++TLT KTI E E ++T ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 155 MQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 214
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRL GG
Sbjct: 215 IQKESTLHLVLRLCGG 230
Score = 111 bits (266), Expect = 1e-25
Identities = 54/77 (70%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDS-KTMADY 204
MQIF+ TLTGKTIT E E ++T+ ++K KI DKE + DQQRLIFAG+QLED T+ADY
Sbjct: 231 MQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADY 290
Query: 205 NIQKESTLHMVLRLRGG 255
NIQKESTLH+VLRLRGG
Sbjct: 291 NIQKESTLHLVLRLRGG 307
Score = 101 bits (242), Expect = 1e-22
Identities = 46/78 (58%), Positives = 62/78 (79%)
Frame = +1
Query: 22 VKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMAD 201
+ MQI KTLT KTIT + ++T+ ++K KI D EG+P+DQQRLIF+GK L+D +T+AD
Sbjct: 1 MSMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLAD 60
Query: 202 YNIQKESTLHMVLRLRGG 255
Y+IQK+S LH+ LRLRGG
Sbjct: 61 YSIQKDSILHLALRLRGG 78
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 114 bits (274), Expect = 1e-26
Identities = 52/76 (68%), Positives = 66/76 (86%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
+QI+ KTLT KTIT + E ++++ ++K KI +KEG+P+DQQRLIFAGKQLED T+ADYN
Sbjct: 3 IQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYN 62
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRLRGG
Sbjct: 63 IQKESTLHLVLRLRGG 78
Score = 113 bits (272), Expect = 2e-26
Identities = 53/76 (69%), Positives = 65/76 (85%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF++TLTGKTIT E + ++T+ ++K KI DKEG+ QQRLIFAGKQLED +T+ADYN
Sbjct: 79 MQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYN 138
Query: 208 IQKESTLHMVLRLRGG 255
IQKESTLH+VLRL GG
Sbjct: 139 IQKESTLHLVLRLCGG 154
Score = 99.5 bits (237), Expect = 4e-22
Identities = 47/74 (63%), Positives = 60/74 (81%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIFIKTLTGKTI E E ++T+A++K+KI KEG+ DQQ LIF G+QLED T+ DY+
Sbjct: 552 MQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYD 611
Query: 208 IQKESTLHMVLRLR 249
I K+STL++VLRLR
Sbjct: 612 IHKKSTLYLVLRLR 625
Score = 85.0 bits (201), Expect = 9e-18
Identities = 39/76 (51%), Positives = 51/76 (67%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
MQIF+K GK IT E ++T+ +K KI DK G P DQQ L+F G QL+D +T+ DYN
Sbjct: 393 MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYN 452
Query: 208 IQKESTLHMVLRLRGG 255
I+ ESTLH+ +R G
Sbjct: 453 IRNESTLHLFFHIRHG 468
Score = 83.4 bits (197), Expect = 3e-17
Identities = 41/76 (53%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQ--QRLIFAGKQLEDSKTMAD 201
MQIF+KTLT K I E E +T+ ++K + DKEG+ QRLIF GK+L+D T+AD
Sbjct: 319 MQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLAD 378
Query: 202 YNIQKESTLHMVLRLR 249
Y+IQKESTLH+VL ++
Sbjct: 379 YSIQKESTLHLVLGMQ 394
Score = 82.2 bits (194), Expect = 6e-17
Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 7/83 (8%)
Frame = +1
Query: 28 MQIFIKTL-------TGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDS 186
MQIF+KT T KTIT E E ++T+ ++K KI K G+P+D+QRLIF G+ L S
Sbjct: 469 MQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGS 528
Query: 187 KTMADYNIQKESTLHMVLRLRGG 255
+T+ DYNIQK ST+H + RGG
Sbjct: 529 RTLLDYNIQKGSTIHQLFLQRGG 551
Score = 79.4 bits (187), Expect = 5e-16
Identities = 40/81 (49%), Positives = 54/81 (66%), Gaps = 5/81 (6%)
Frame = +1
Query: 28 MQIFIKTL-----TGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKT 192
M IF+K L TG+ E E ++T+ ++K K+ DKE +P+D RLIFAGK LE +T
Sbjct: 238 MYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRT 297
Query: 193 MADYNIQKESTLHMVLRLRGG 255
+A YNIQK STL++V R R G
Sbjct: 298 LAHYNIQKGSTLYLVTRFRCG 318
Score = 78.6 bits (185), Expect = 8e-16
Identities = 40/82 (48%), Positives = 58/82 (70%), Gaps = 7/82 (8%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAET-----EPAETVADLKQKIADKEGVPVDQQRLIFAGKQL--EDS 186
MQIF+ T +GK T++T E ++T+ ++K KI D+EG+ D QRLIF G++L ED+
Sbjct: 155 MQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDN 214
Query: 187 KTMADYNIQKESTLHMVLRLRG 252
+T+ADY I+ STL + LRLRG
Sbjct: 215 RTLADYGIRNRSTLCLALRLRG 236
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 101 bits (241), Expect = 1e-22
Identities = 46/73 (63%), Positives = 57/73 (78%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
M IFIKTLTG+ I E E +T+ ++K KI DK+G+PVDQQRLIF GKQLED T+ADYN
Sbjct: 86 MFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYN 145
Query: 208 IQKESTLHMVLRL 246
IQ +S LH++ RL
Sbjct: 146 IQNDSILHLIKRL 158
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 80.6 bits (190), Expect = 2e-16
Identities = 36/76 (47%), Positives = 52/76 (68%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
M+I +KTLT K I E E +T+ +K++I +KEG+P QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 208 IQKESTLHMVLRLRGG 255
+++ S LH+VL LRGG
Sbjct: 61 LERGSVLHLVLALRGG 76
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 69.3 bits (162), Expect = 5e-13
Identities = 31/72 (43%), Positives = 49/72 (68%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
+++ IKTL +T T + ETV K+KIA + GVPV QQRLIF G+ L+D +++Y+
Sbjct: 24 LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83
Query: 208 IQKESTLHMVLR 243
++ TLH+++R
Sbjct: 84 LENGHTLHLIVR 95
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 65.7 bits (153), Expect = 6e-12
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 13/86 (15%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGK------------ 171
M IFIKTLTG+T T E + ++T+ +LK K +KEG+PV+QQRLIF G+
Sbjct: 50 MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSIN 109
Query: 172 -QLEDSKTMADYNIQKESTLHMVLRL 246
++ DS D I E T +VLRL
Sbjct: 110 LEVADSSDTIDLKINGEPTRQLVLRL 135
Score = 60.1 bits (139), Expect = 3e-10
Identities = 28/70 (40%), Positives = 46/70 (65%)
Frame = +1
Query: 19 SVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMA 198
+V M+IF+ T+ KT E + ++T+ LK I D+ G PVDQQ L G +L+++ T++
Sbjct: 138 AVLMRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATIS 197
Query: 199 DYNIQKESTL 228
DYNI+ ++ L
Sbjct: 198 DYNIKPDANL 207
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLK 108
M I IKTL GK I E E + DLK
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTIDLK 27
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 62.5 bits (145), Expect = 6e-11
Identities = 29/81 (35%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = +1
Query: 10 RSNSVKMQIFIKTLTG-KTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDS 186
R S ++QIF++ ++G KTI E +TV L Q+I K +P +QR+I+ GKQL+
Sbjct: 89 RPESTRLQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRE 148
Query: 187 KTMADYNIQKESTLHMVLRLR 249
++ Y+I+++++L +V R++
Sbjct: 149 NSLTYYSIEQDASLQLVARMQ 169
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 55.2 bits (127), Expect = 8e-09
Identities = 25/75 (33%), Positives = 41/75 (54%)
Frame = +1
Query: 13 SNSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKT 192
+ V + + ++ G + T TV K+ IA VP +QQRLI+ G+ L+D +T
Sbjct: 13 AEGVAVAVNVRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQT 72
Query: 193 MADYNIQKESTLHMV 237
+ Y +Q + T+HMV
Sbjct: 73 LLSYGLQADHTVHMV 87
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 54.8 bits (126), Expect = 1e-08
Identities = 24/66 (36%), Positives = 38/66 (57%)
Frame = +1
Query: 40 IKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKE 219
I+ G + +T TV K+ +A VP +QQRLI+ G+ L+D +T+ Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 220 STLHMV 237
T+HMV
Sbjct: 82 HTIHMV 87
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 53.2 bits (122), Expect = 3e-08
Identities = 27/67 (40%), Positives = 38/67 (56%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
M ++I T TG + + + ETV ++K+KI +G+PV +Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 208 IQKESTL 228
I ES L
Sbjct: 61 ILFESRL 67
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 52.8 bits (121), Expect = 5e-08
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGV--PVDQQRLIFAGKQLEDSKTMAD 201
M+IF+KTL+G E +PA+ V+D+K I +G P +Q LI GK L+D T+ +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 202 YNIQKESTLHMVL 240
N+ + S + ++L
Sbjct: 61 NNVVENSFIVIML 73
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 50.8 bits (116), Expect = 2e-07
Identities = 31/79 (39%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGK---QLEDSKTMA 198
MQ+FI GK E E T+AD+K KI D G+ Q L GK ++ TM
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 199 DYNIQKESTLHMVLRLRGG 255
DY I+ HM R+RGG
Sbjct: 61 DYKIKACDIFHMSDRMRGG 79
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 50.0 bits (114), Expect = 3e-07
Identities = 27/67 (40%), Positives = 36/67 (53%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
M + I T TG + + + ETV +K+KI +G+PV +Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 208 IQKESTL 228
I ES L
Sbjct: 61 ILFESLL 67
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 50.0 bits (114), Expect = 3e-07
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +1
Query: 16 NSVKMQIFIKTLTGKTITAE-TEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKT 192
+S +Q F++ L GK++T + P +KQ+I ++ +P QRLI G Q+ D
Sbjct: 5 SSKPLQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSA 64
Query: 193 MADYNIQKESTLHMVLRLRGG 255
++ Q ++T+++VL LRGG
Sbjct: 65 IS----QPDATVNLVLSLRGG 81
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 47.2 bits (107), Expect = 2e-06
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAE-TEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADY 204
+Q F++ L GK++T + P +KQ+I ++ +P QRLI G Q+ + ++
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66
Query: 205 NIQKESTLHMVLRLRGG 255
Q ++T+++VL LRGG
Sbjct: 67 --QSDTTMNLVLSLRGG 81
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 47.2 bits (107), Expect = 2e-06
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGV---PVDQQRLIFAGKQLEDSKTMA 198
M+IF+KTL G E +P ++V D+K+ I +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 199 DYNIQKESTLHMVL 240
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 47.2 bits (107), Expect = 2e-06
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGV---PVDQQRLIFAGKQLEDSKTMA 198
M+IF+KTL G E +P ++V D+K+ I +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 199 DYNIQKESTLHMVL 240
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 46.8 bits (106), Expect = 3e-06
Identities = 23/77 (29%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +1
Query: 19 SVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQL-EDSKTM 195
SVK + +++G T+ ++++A++K +I G V +Q+L+F+G++L ++ +
Sbjct: 31 SVKSVLVFLSVSGSTMPMLILESDSIAEVKLRIQTCNGFRVRRQKLVFSGRELARNASRV 90
Query: 196 ADYNIQKESTLHMVLRL 246
DY + S LH+VL+L
Sbjct: 91 KDYGVTGGSVLHLVLKL 107
Score = 34.3 bits (75), Expect = 0.017
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 34 IFIKTLTGKTITAETEPAETVADLKQKIADK-EGVP-VDQQRLIFAGKQLEDSKTMADYN 207
+ + T GK + V LK++I+ + +G P VD Q ++F G++L+D++ +
Sbjct: 113 VTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGIC 172
Query: 208 IQKESTLHMVLR 243
S +H++++
Sbjct: 173 KDGNSVIHLLVK 184
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 46.4 bits (105), Expect = 4e-06
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGV-PVDQQRLIFAGKQLEDSKTMADY 204
++I IK L T T E V DLKQ I GV P Q RL+F G+ L++ + ++DY
Sbjct: 11 IRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDY 70
Query: 205 NIQKESTLHMV 237
++++ TL++V
Sbjct: 71 HVEEGHTLYLV 81
>At5g57860.3 68418.m07237 ubiquitin family protein contains Pfam
profile PF00240: Ubiquitin family
Length = 95
Score = 46.0 bits (104), Expect = 5e-06
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = +1
Query: 28 MQIFIKTLTGKTIT-AETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQ--LEDSKTMA 198
M ++I+ KT + +P ETV D+KQK+ PV+ QRL+ + LEDSK++A
Sbjct: 1 MAMYIRVKRMKTTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLA 60
Query: 199 DYNIQKESTLHMVLR 243
D ++ ++ + + L+
Sbjct: 61 DQKVENDAVVALTLK 75
>At5g57860.2 68418.m07236 ubiquitin family protein contains Pfam
profile PF00240: Ubiquitin family
Length = 95
Score = 46.0 bits (104), Expect = 5e-06
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = +1
Query: 28 MQIFIKTLTGKTIT-AETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQ--LEDSKTMA 198
M ++I+ KT + +P ETV D+KQK+ PV+ QRL+ + LEDSK++A
Sbjct: 1 MAMYIRVKRMKTTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLA 60
Query: 199 DYNIQKESTLHMVLR 243
D ++ ++ + + L+
Sbjct: 61 DQKVENDAVVALTLK 75
>At5g57860.1 68418.m07235 ubiquitin family protein contains Pfam
profile PF00240: Ubiquitin family
Length = 95
Score = 46.0 bits (104), Expect = 5e-06
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = +1
Query: 28 MQIFIKTLTGKTIT-AETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQ--LEDSKTMA 198
M ++I+ KT + +P ETV D+KQK+ PV+ QRL+ + LEDSK++A
Sbjct: 1 MAMYIRVKRMKTTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLA 60
Query: 199 DYNIQKESTLHMVLR 243
D ++ ++ + + L+
Sbjct: 61 DQKVENDAVVALTLK 75
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 45.2 bits (102), Expect = 9e-06
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +1
Query: 46 TLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKT-MADYNIQKES 222
TL G I ++++ +K +I G V Q+L+F G++L S + M DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 223 TLHMVLRL 246
LH+VL+L
Sbjct: 100 ILHLVLKL 107
Score = 42.3 bits (95), Expect = 6e-05
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +1
Query: 40 IKTLTGKTITAETEPAETVADLKQKIADKEG--VPVDQQRLIFAGKQLEDSKTMADYNIQ 213
+KT GK E + +K++I+ K G V D+Q +++ G++LED + D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 214 KESTLHMVLR 243
+S LH+++R
Sbjct: 175 DDSVLHLLVR 184
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 45.2 bits (102), Expect = 9e-06
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +1
Query: 46 TLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKT-MADYNIQKES 222
TL G I ++++ +K +I G V Q+L+F G++L S + M DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 223 TLHMVLRL 246
LH+VL+L
Sbjct: 100 ILHLVLKL 107
Score = 42.3 bits (95), Expect = 6e-05
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +1
Query: 40 IKTLTGKTITAETEPAETVADLKQKIADKEG--VPVDQQRLIFAGKQLEDSKTMADYNIQ 213
+KT GK E + +K++I+ K G V D+Q +++ G++LED + D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 214 KESTLHMVLR 243
+S LH+++R
Sbjct: 175 DDSVLHLLVR 184
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 44.0 bits (99), Expect = 2e-05
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLED 183
M +F +T +G T E +TV ++KQKI + +PV +Q L+F G L+D
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQD 52
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 43.6 bits (98), Expect = 3e-05
Identities = 21/71 (29%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADK-EGVPVDQQRLIFAGKQLEDSKTMADY 204
M+I +K+L GK E+V+ L+ K + K + + ++ + GK+L+D K++A
Sbjct: 661 MKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAAQ 720
Query: 205 NIQKESTLHMV 237
N+Q S +H++
Sbjct: 721 NVQPNSLVHLI 731
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 43.2 bits (97), Expect = 4e-05
Identities = 20/69 (28%), Positives = 39/69 (56%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
M++ ++ +G T + + +TV K+KI + +PV +Q + F GK LED + +++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 208 IQKESTLHM 234
I + LH+
Sbjct: 61 ILQNPLLHL 69
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 42.7 bits (96), Expect = 5e-05
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADK-EGVPVDQQRLIFAGKQLEDSKTMADY 204
M+I + L GK E+V+ LK K + K + + ++ + GK+LED K++A+
Sbjct: 500 MKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQ 559
Query: 205 NIQKESTLHMV 237
N+Q S +H++
Sbjct: 560 NVQPNSLVHLL 570
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 41.5 bits (93), Expect = 1e-04
Identities = 21/57 (36%), Positives = 34/57 (59%)
Frame = +1
Query: 85 AETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 255
+E V LK+KIA + +P ++Q+L L+D+ ++A YN+ L + LR RGG
Sbjct: 726 SENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGG 782
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 41.1 bits (92), Expect = 1e-04
Identities = 18/71 (25%), Positives = 41/71 (57%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
M+I + T + IT + + ETV ++K + + VP+ QQ+L++ G ++ +S ++
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 208 IQKESTLHMVL 240
++ + L M++
Sbjct: 61 VKDDDLLMMMV 71
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 39.5 bits (88), Expect = 5e-04
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
+++ I+ +G + T + +TV +K+KI +G PV +Q LIF K L+D M
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61
Query: 208 IQKESTL 228
I+ S +
Sbjct: 62 IRHNSRI 68
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 39.1 bits (87), Expect = 6e-04
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 207
+ + I+ +G + T + +TV +K+KI +G PV +Q LIF K L+D M
Sbjct: 36 ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95
Query: 208 IQKESTL 228
I+ S +
Sbjct: 96 IRHNSRI 102
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 38.3 bits (85), Expect = 0.001
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLED 183
M +F +T +G E +T+ ++K+KI + +PV +Q LIF G L+D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 34.7 bits (76), Expect = 0.013
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAG 168
M+ ++ L G + E E +T+ +KQKI + VPV +Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 33.5 bits (73), Expect = 0.030
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAG 168
M+ ++ L G + E + +T+ +KQKI + +PV +Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At3g01050.1 68416.m00006 expressed protein
Length = 117
Score = 33.5 bits (73), Expect = 0.030
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Frame = +1
Query: 25 KMQIFIKTLTGKTITAETEP-AETVADLKQKIA-----DKEGVP--VDQQRLIFAGKQLE 180
+++I + G I + P A TV+ LK+ + +KE P V + +LI AGK LE
Sbjct: 7 QLEIKFRLTDGSDIGPKAFPDATTVSALKETVISEWPREKENGPKTVKEVKLISAGKVLE 66
Query: 181 DSKTMADY 204
+SKT+ DY
Sbjct: 67 NSKTVKDY 74
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 33.5 bits (73), Expect = 0.030
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +1
Query: 55 GKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHM 234
GK+I P TV DLK ++ V Q+LIF GK L ++ T+ ++ + L +
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603
Query: 235 V 237
+
Sbjct: 604 M 604
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 32.7 bits (71), Expect = 0.052
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 40 IKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLED 183
+ T++ + + T +LK IA G+ +QRL+F GK+ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At5g12280.1 68418.m01444 hypothetical protein
Length = 419
Score = 32.3 bits (70), Expect = 0.068
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +1
Query: 85 AETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNI 210
+E VA LK+KI+ + P ++Q+L L+D+ ++A YN+
Sbjct: 367 SENVASLKEKISGEIQFPTNKQKLRGKAGFLKDNTSLAHYNV 408
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 31.1 bits (67), Expect = 0.16
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQ 150
M IF+ TL GKT E + +E + +K I D + PV +Q
Sbjct: 49 MSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHD-QVPPVKKQ 88
Score = 27.9 bits (59), Expect = 1.5
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLK 108
M+I IKT GKTI E E + D+K
Sbjct: 1 MKILIKTEKGKTINLELEDSSETIDIK 27
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 30.3 bits (65), Expect = 0.28
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 79 EPAETVADLKQKIADKEGVPVDQQRLIFAGKQLED 183
E T +LK ++ G+ QQRL+F GK+ ED
Sbjct: 86 EATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At2g32360.1 68415.m03955 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 175
Score = 30.3 bits (65), Expect = 0.28
Identities = 17/79 (21%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Frame = +1
Query: 28 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQL-------EDS 186
M++ ++ +TG I + TV +K+KIA + +PV + L+ ++ ED
Sbjct: 1 MKVSVEIITGTFIDTDVSEDATVKQMKEKIAVEVKLPVTRLILVIGDEETRRLVMEDEDD 60
Query: 187 KTMADYNIQKESTLHMVLR 243
+ D + ++S +++ +
Sbjct: 61 MMLRDLGVGEDSHIYLFFK 79
>At2g35360.1 68415.m04335 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 225
Score = 29.9 bits (64), Expect = 0.36
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 94 VADLKQKIADKEGVPVDQQRLIFAGKQLEDSK 189
+ DL+ IA+K PV R+I GK L+D +
Sbjct: 41 IRDLRNAIAEKGKFPVSTLRMILRGKALQDEE 72
>At4g05240.1 68417.m00791 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 197
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 88 ETVADLKQKIADKEGVPVDQQRLIFAGKQLED 183
+TV ++KQKI + + V +Q L F G L+D
Sbjct: 78 DTVLEIKQKIEKYQRILVYRQTLFFQGNVLQD 109
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/56 (21%), Positives = 29/56 (51%)
Frame = +1
Query: 25 KMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKT 192
+ ++F++T TG + E + ++ +K+K+ P+++ L F L++ T
Sbjct: 40 RRRVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 27.5 bits (58), Expect = 1.9
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 91 TVADLKQKIADKEGVPVDQQRLIFAGKQLED 183
T+ L+ ++A + G+ + +LIFAGK L+D
Sbjct: 22 TLNMLRDEVAKRSGLDPESIKLIFAGKILKD 52
>At5g63420.1 68418.m07962 metallo-beta-lactamase family protein
Length = 911
Score = 27.1 bits (57), Expect = 2.6
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +1
Query: 70 AETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLR 249
+ETE VAD + K KE D + + + + S N K + V+R+R
Sbjct: 774 SETENMNKVADTEPKAEGKENSRDDDELADASDSETKSSPKRVRKNKWKPEEIKKVIRMR 833
Query: 250 G 252
G
Sbjct: 834 G 834
>At2g31960.1 68415.m03905 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase;
contains non-consensus splice aite AC at exon 33
Length = 1959
Score = 27.1 bits (57), Expect = 2.6
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Frame = -1
Query: 237 HHVKSRFLLNIVIGHSFGIFQL--------FARKDKSLLIYGHTFFIGNFLLEI 100
H K +L IV+ F IFQ F ++++SL IYG ++F+ F+L I
Sbjct: 1760 HSGKRGIILEIVLALRFFIFQYGLVYQLSTFKQENQSLWIYGASWFVILFILLI 1813
>At3g44110.1 68416.m04727 DNAJ heat shock protein, putative (J3)
identical to AtJ3 [Arabidopsis thaliana] GI:2641638,
strong similarity to several plant DnaJ proteins from
PGR; contains Pfam profiles PF00226 DnaJ domain, PF00684
DnaJ central domain (4 repeats), PF01556 DnaJ C terminal
region
Length = 420
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 31 QIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGK 171
Q + L G+++ ++ P E V K EG+P+ QR GK
Sbjct: 288 QFVLTHLDGRSLLIKSNPGEVVKPDSYKAISDEGMPI-YQRPFMKGK 333
>At3g17080.1 68416.m02179 self-incompatibility protein-related
similar to S1 self-incompatibility protein GB:CAA52380
[Papaver rhoeas] (Proc. Natl. Acad. Sci. U.S.A. 91 (6),
2265-2269 (1994))
Length = 134
Score = 25.8 bits (54), Expect = 5.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 176 WKIPKLWPITIFKRNLLFTWCYDYE 250
WKI K P +K+ +F CY ++
Sbjct: 110 WKIRKNGPCKFYKKTGMFDHCYSWD 134
>At3g44110.2 68416.m04728 DNAJ heat shock protein, putative (J3)
identical to AtJ3 [Arabidopsis thaliana] GI:2641638,
strong similarity to several plant DnaJ proteins from
PGR; contains Pfam profiles PF00226 DnaJ domain, PF00684
DnaJ central domain (4 repeats), PF01556 DnaJ C terminal
region
Length = 343
Score = 25.4 bits (53), Expect = 7.8
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +1
Query: 31 QIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQ 150
Q + L G+++ ++ P E V K EG+P+ Q+
Sbjct: 288 QFVLTHLDGRSLLIKSNPGEVVKPDSYKAISDEGMPIYQR 327
>At1g80260.1 68414.m09396 tubulin family protein
Length = 951
Score = 25.4 bits (53), Expect = 7.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2
Query: 182 SSNCLPAKISLC*STGTPSLSAIFCL 105
S L K+S C ST SLS +FCL
Sbjct: 352 SVGSLLTKMSSCSSTADLSLSEVFCL 377
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,228,308
Number of Sequences: 28952
Number of extensions: 117180
Number of successful extensions: 456
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 12,070,560
effective HSP length: 70
effective length of database: 10,043,920
effective search space used: 321405440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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