Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19e11
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    22   3.7  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   3.7  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   6.5  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   6.5  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   6.5  

>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = -1

Query: 206 LFRTITCIVIAILIRGIYLGQAKVSNVRHVERLLTNY 96
           +F  +TC  +  L   +      + ++   ERLL NY
Sbjct: 5   VFLVLTCAHVVFLEEYVIPDNIDIDDILSNERLLKNY 41


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 269 NCGKWLFASMMHCFQYC 219
           NC   L+A M++C++ C
Sbjct: 718 NCSPDLYAVMLNCWKEC 734


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 609 TVGTQCHHAGSGMPEIYLGAGD 544
           T G+Q    G   P +  G+GD
Sbjct: 126 TAGSQADRDGKNYPAVPYGSGD 147


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 609 TVGTQCHHAGSGMPEIYLGAGD 544
           T G+Q    G   P +  G+GD
Sbjct: 127 TAGSQADRDGKNYPAVPYGSGD 148


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 609 TVGTQCHHAGSGMPEIYLGAGD 544
           T G+Q    G   P +  G+GD
Sbjct: 127 TAGSQADRDGKNYPAVPYGSGD 148


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,386
Number of Sequences: 336
Number of extensions: 2912
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)