Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19e08
         (666 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    24   0.97 
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    24   1.3  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    24   1.3  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   5.2  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   6.9  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   9.1  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 24.2 bits (50), Expect = 0.97
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 146 YECESRFRRTNRNIVVPANN*EQYKNLKFY 235
           Y+CE   R   +    P N+ EQY N  +Y
Sbjct: 64  YDCEGVIRHHGQWNYSPDNHFEQYPNPTYY 93


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -2

Query: 113 SSVKKTNSKHK-KFVYWPKDTNALVPLV 33
           S V+  N K   KF +WP   NAL+ L+
Sbjct: 36  SLVRVENGKKVFKFAWWPLTRNALLVLI 63


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -2

Query: 113 SSVKKTNSKHK-KFVYWPKDTNALVPLV 33
           S V+  N K   KF +WP   NAL+ L+
Sbjct: 36  SLVRVENGKKVFKFAWWPLTRNALLVLI 63


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 390 IVSFDACITYKSPCSPD 440
           ++++  C+  K PCSP+
Sbjct: 53  LLNYINCLLEKGPCSPE 69


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 408 CITYKSPCSPD 440
           C+  K PC+PD
Sbjct: 48  CLLEKKPCTPD 58


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 357 VAAPYPRALAPYCCRYKY 304
           VAA +PR   P  C+Y Y
Sbjct: 179 VAATHPRYADPDDCQYFY 196


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,113
Number of Sequences: 336
Number of extensions: 3358
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)