Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19e07
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003461-1|AAO39464.1| 1019|Drosophila melanogaster RH14214p pro...    29   6.3  
AY061373-1|AAL28921.1| 1205|Drosophila melanogaster LD29485p pro...    29   6.3  
AE014297-694|AAF54188.2| 1019|Drosophila melanogaster CG7918-PA ...    29   6.3  
AE014296-340|AAF47556.1| 1205|Drosophila melanogaster CG2069-PA ...    29   6.3  

>BT003461-1|AAO39464.1| 1019|Drosophila melanogaster RH14214p
           protein.
          Length = 1019

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +1

Query: 376 IIQHENPKCPIEFTYPETDMQSACSALLKNRNGQSVPPPI 495
           +I+ +  K  +E    +TD+ SAC+ ++K  +G     P+
Sbjct: 360 VIEEKILKTKVELAGDQTDLDSACTTVIKRLSGSGQANPL 399


>AY061373-1|AAL28921.1| 1205|Drosophila melanogaster LD29485p
           protein.
          Length = 1205

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -3

Query: 461 FSNALHADCISVSGYVNSMGH-LGFSCW 381
           F+  LH  C+++SG  +S GH +   CW
Sbjct: 190 FAMKLHIQCVNISGGSSSRGHRIASICW 217


>AE014297-694|AAF54188.2| 1019|Drosophila melanogaster CG7918-PA
           protein.
          Length = 1019

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +1

Query: 376 IIQHENPKCPIEFTYPETDMQSACSALLKNRNGQSVPPPI 495
           +I+ +  K  +E    +TD+ SAC+ ++K  +G     P+
Sbjct: 360 VIEEKILKTKVELAGDQTDLDSACTTVIKRLSGSGQANPL 399


>AE014296-340|AAF47556.1| 1205|Drosophila melanogaster CG2069-PA
           protein.
          Length = 1205

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -3

Query: 461 FSNALHADCISVSGYVNSMGH-LGFSCW 381
           F+  LH  C+++SG  +S GH +   CW
Sbjct: 190 FAMKLHIQCVNISGGSSSRGHRIASICW 217


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,461,146
Number of Sequences: 53049
Number of extensions: 623366
Number of successful extensions: 1480
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1480
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)