Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19e05
(635 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 244 1e-63
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 243 2e-63
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 191 1e-47
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 188 7e-47
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 183 4e-45
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 182 5e-45
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 175 1e-42
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 173 2e-42
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 172 5e-42
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 170 2e-41
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 164 2e-39
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 157 3e-37
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 147 2e-34
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 146 5e-34
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 140 2e-32
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 138 1e-31
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 112 8e-24
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 102 8e-21
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 92 1e-17
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 85 1e-15
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 77 5e-13
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 75 2e-12
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 73 6e-12
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 73 6e-12
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 73 6e-12
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 68 2e-10
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 67 4e-10
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 61 2e-08
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 60 3e-08
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 58 2e-07
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 58 2e-07
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 47 4e-04
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 47 4e-04
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 45 0.002
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 43 0.007
UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole gen... 41 0.022
UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687; ... 38 0.27
UniRef50_Q9VDD2 Cluster: CG17299-PF, isoform F; n=18; Diptera|Re... 36 0.82
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 1.1
UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella ve... 36 1.1
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 35 1.9
UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1; ... 34 3.3
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 34 3.3
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 33 4.4
UniRef50_A1FG00 Cluster: Putative uncharacterized protein; n=1; ... 33 4.4
UniRef50_Q7QNZ3 Cluster: GLP_149_9791_7437; n=2; Giardia lamblia... 33 5.8
UniRef50_A4RCN1 Cluster: Putative uncharacterized protein; n=2; ... 33 5.8
UniRef50_P04196 Cluster: Histidine-rich glycoprotein precursor; ... 33 5.8
UniRef50_UPI0000F2E6E2 Cluster: PREDICTED: hypothetical protein;... 33 7.6
UniRef50_A3UKR0 Cluster: Probable C-5 cytosine-specific DNA meth... 33 7.6
UniRef50_A1HES9 Cluster: Putative uncharacterized protein; n=1; ... 33 7.6
UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.6
UniRef50_Q2H7T6 Cluster: Putative uncharacterized protein; n=1; ... 33 7.6
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 244 bits (597), Expect = 1e-63
Identities = 115/181 (63%), Positives = 134/181 (74%)
Frame = +3
Query: 93 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 272
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 273 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 452
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 453 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 632
++GH IE++PELPLVV DKV+ KTK+AV+ L++LKAW+D
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWND 179
Query: 633 I 635
I
Sbjct: 180 I 180
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 243 bits (595), Expect = 2e-63
Identities = 116/183 (63%), Positives = 136/183 (74%)
Frame = +3
Query: 87 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 266
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 267 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 446
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNV 120
Query: 447 XXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAW 626
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W
Sbjct: 121 NQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIW 180
Query: 627 SDI 635
+DI
Sbjct: 181 ADI 183
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 191 bits (465), Expect = 1e-47
Identities = 95/178 (53%), Positives = 114/178 (64%)
Frame = +3
Query: 102 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 281
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNH 61
Query: 282 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 461
SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 62 SAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRF 121
Query: 462 XXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 635
+RGH I +PE+PLVV D +Q KTK+A+ FL+ + A D+
Sbjct: 122 AVVSALAASSVPSLVMSRGHQIGNVPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDV 179
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 188 bits (459), Expect = 7e-47
Identities = 96/181 (53%), Positives = 113/181 (62%), Gaps = 3/181 (1%)
Frame = +3
Query: 102 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 281
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQT
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQT 61
Query: 282 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 461
SAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 62 SAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLGQKRF 121
Query: 462 XXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQE---INKTKQAVIFLRRLKAWSD 632
ARGH I ++ E+PLV+ +V E I +T A L+ + A D
Sbjct: 122 ATVSALAASGVPALLFARGHQISEVAEVPLVINSEVFEGAKIARTAAAAGLLKTVGALKD 181
Query: 633 I 635
+
Sbjct: 182 V 182
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 183 bits (445), Expect = 4e-45
Identities = 90/173 (52%), Positives = 110/173 (63%)
Frame = +3
Query: 93 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 272
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS +AG
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60
Query: 273 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 452
HQ SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 61 HQHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTE 120
Query: 453 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLR 611
ARGH I +PELPLV+++++Q INKT AV F +
Sbjct: 121 KRHAVAAAIAATGCPSLVMARGHRINNVPELPLVISNEIQNINKTSTAVEFFK 173
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 182 bits (444), Expect = 5e-45
Identities = 90/177 (50%), Positives = 110/177 (62%), Gaps = 1/177 (0%)
Frame = +3
Query: 108 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 284
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q S
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHS 64
Query: 285 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 464
AESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K WRRWH
Sbjct: 65 AESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWHRRVNIKQKRHA 124
Query: 465 XXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 635
ARGH I ++P++PLVV DK++ KT A+ FL+R A+ D+
Sbjct: 125 AATAVAATGIVPLVLARGHRISQVPQIPLVVEDKIESYEKTTDALNFLKRFGAFEDV 181
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 175 bits (425), Expect = 1e-42
Identities = 82/173 (47%), Positives = 108/173 (62%)
Frame = +3
Query: 99 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 278
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+Q
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60
Query: 279 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 458
TSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ WR WH
Sbjct: 61 TSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWHRKINLKEKR 120
Query: 459 XXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRL 617
+RGH +E +PELPLV+ D ++ + KT+ AV L +
Sbjct: 121 LALAVSVAATASVPLVMSRGHRVESVPELPLVLDDTMETLTKTRDAVELLNSM 173
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 173 bits (422), Expect = 2e-42
Identities = 85/171 (49%), Positives = 107/171 (62%)
Frame = +3
Query: 105 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 284
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK +G+QTS
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTS 62
Query: 285 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 464
A SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ WRRWH
Sbjct: 63 ARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWHRKVNLKEKRQA 122
Query: 465 XXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRL 617
+RGH IE + E+P+VV D +++INKTK AV L +
Sbjct: 123 LASALAATAVVPVVMSRGHRIEALREVPMVVDDAIEQINKTKDAVKLLETI 173
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 172 bits (419), Expect = 5e-42
Identities = 79/104 (75%), Positives = 88/104 (84%)
Frame = +3
Query: 120 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG 299
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTSAESWG
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWG 185
Query: 300 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 431
TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 186 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 170 bits (414), Expect = 2e-41
Identities = 84/172 (48%), Positives = 105/172 (61%)
Frame = +3
Query: 93 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 272
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59
Query: 273 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 452
++TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 60 YETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRWGRKINLKE 119
Query: 453 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFL 608
ARGH I + E+PLV ++ ++ + KTK A+ FL
Sbjct: 120 KRYAVCSSIAASGITSLVLARGHRISNLKEVPLVASNDIESMQKTKDALKFL 171
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 164 bits (398), Expect = 2e-39
Identities = 82/175 (46%), Positives = 106/175 (60%)
Frame = +3
Query: 111 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAE 290
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+ AGHQ SAE
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAE 65
Query: 291 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXX 470
SWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 66 SWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNVTQRRFAMC 125
Query: 471 XXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 635
ARGH I+ +PELPLVV+D V++I KTK+AV L LKA D+
Sbjct: 126 SAIAASSNPSLVLARGHKIDNVPELPLVVSDDVEQIKKTKEAVKVLAALKASDDV 180
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 157 bits (380), Expect = 3e-37
Identities = 82/179 (45%), Positives = 108/179 (60%), Gaps = 1/179 (0%)
Frame = +3
Query: 102 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 281
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS +AG Q
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQH 62
Query: 282 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 461
SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 63 SAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMRRF 122
Query: 462 XXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADK-VQEINKTKQAVIFLRRLKAWSDI 635
ARGH I +P++PLVV K + I KTKQAV L+++ A+SD+
Sbjct: 123 AVASCIAASAVPALVSARGHHIAGVPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDV 181
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 147 bits (356), Expect = 2e-34
Identities = 77/174 (44%), Positives = 95/174 (54%)
Frame = +3
Query: 114 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 293
++ Y TV+ LP VF PIR DLV + +RQPY VSK AG Q SAES
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAES 63
Query: 294 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 473
WGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 64 WGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRWARKVVENTKKIAEAM 123
Query: 474 XXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 635
+ARGH I + LP++V+D + + KTK AV LR L ++
Sbjct: 124 AVAASAQASLVEARGHRISDVKMLPIIVSDDIAKARKTKDAVEILRNLNMTEEL 177
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 146 bits (353), Expect = 5e-34
Identities = 70/151 (46%), Positives = 89/151 (58%)
Frame = +3
Query: 165 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 344
+P VF + IR D+V VH +M KN RQ Y VS AG TSA SWGTGRAV+R+PRV G G
Sbjct: 19 IPKVFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSWGTGRAVSRVPRVPGSG 78
Query: 345 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 524
THRSGQGA N CRGGR+F PT WR+WH +RG+
Sbjct: 79 THRSGQGAIANFCRGGRIFNPTTIWRKWHHKINKNQRKSAIFSAIASSSIVSIIVSRGYR 138
Query: 525 IEKIPELPLVVADKVQEINKTKQAVIFLRRL 617
++ IPE+P V+ D +++I KT+ + L L
Sbjct: 139 VKTIPEIPFVIEDSIEKIPKTRDLIKILTTL 169
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 140 bits (340), Expect = 2e-32
Identities = 68/179 (37%), Positives = 106/179 (59%)
Frame = +3
Query: 99 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 278
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+ AG +
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKK 58
Query: 279 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 458
SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 59 VSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQRK 118
Query: 459 XXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 635
QARGH++ ++ E+P+VV D VQEI +T+ AV L+++ + D+
Sbjct: 119 FAIASAIAATAVVPLVQARGHVLGEVKEVPIVVVDAVQEIKRTRDAVELLKKVGVYGDV 177
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 138 bits (334), Expect = 1e-31
Identities = 67/137 (48%), Positives = 82/137 (59%), Gaps = 3/137 (2%)
Frame = +3
Query: 231 KNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 410
++++ V +AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPT
Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPT 81
Query: 411 KPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKV---QEIN 581
K WR+WH ARGH + +PE+PLV++ I
Sbjct: 82 KVWRKWHQKINLNQKRFATASALAASGSPALLMARGHNVSTVPEVPLVISSTAFADAAIR 141
Query: 582 KTKQAVIFLRRLKAWSD 632
KT AV L+ + A +D
Sbjct: 142 KTSAAVALLKAVGAGAD 158
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 112 bits (269), Expect = 8e-24
Identities = 66/176 (37%), Positives = 84/176 (47%)
Frame = +3
Query: 108 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 287
P V V+ V A P P VF P+RPD++N VH + K R PY VS+ AG Q +A
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTA 60
Query: 288 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXX 467
SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 61 HSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRWCRKVNLNQRRYAV 114
Query: 468 XXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 635
+ARGH I +P +PLVV + KTK A+ ++ + D+
Sbjct: 115 ASALAASANAALVEARGHRIADVPSIPLVV--DTDNVTKTKDALAIIKAVGVLRDV 168
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 102 bits (244), Expect = 8e-21
Identities = 56/177 (31%), Positives = 89/177 (50%), Gaps = 1/177 (0%)
Frame = +3
Query: 108 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 287
P+ ++ E+ +TV+ LP F+ P+R DL+ ++ N RQPY AG +TSA
Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSA 58
Query: 288 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRWHXXXXXXXXXXX 464
ESWG G VA +PRV+G +G+ A GG + APT P + W
Sbjct: 59 ESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDWTQRVNRKERRAA 117
Query: 465 XXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 635
+ RGH+I+ +P LP+VV D+++ +NK ++ F + + W+D+
Sbjct: 118 LRSALAATAKPEFVKERGHVIDDVPHLPVVVVDELKSLNKAREVREFFKSVGLWADV 174
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 91.9 bits (218), Expect = 1e-17
Identities = 53/156 (33%), Positives = 72/156 (46%)
Frame = +3
Query: 168 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 347
P F PIRPDL+ ++S QP V + AG + S ES+G G +ARIPR +G
Sbjct: 45 PLHFLEPIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCESFGVGLGIARIPRYKGSLW 104
Query: 348 HRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHII 527
R G F RGGR P K ++ H ARGH++
Sbjct: 105 PR---GCFAPNTRGGRRAHPPKVEKKLHEEINKKEKKLAIRSAIAATAYRSWVAARGHVV 161
Query: 528 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 635
EK+P LP+VV ++IN+ K+A L W D+
Sbjct: 162 EKVPSLPVVVVGDAEKINRAKEAKKLFEALGLWPDV 197
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 85.0 bits (201), Expect = 1e-15
Identities = 38/122 (31%), Positives = 64/122 (52%)
Frame = +3
Query: 267 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 446
+G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 59 SGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTNR 118
Query: 447 XXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAW 626
+RGH ++ + P+++ ++ I + ++ L+ +
Sbjct: 119 KVKVSAFKTALLSTLFETLVVSRGHSLKDVKNFPMIIDSILKYIWHPSELLMLLKLYGGY 178
Query: 627 SD 632
SD
Sbjct: 179 SD 180
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 76.6 bits (180), Expect = 5e-13
Identities = 47/174 (27%), Positives = 79/174 (45%)
Frame = +3
Query: 114 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 293
++VYS K + + LP +F+ RPD++ +SM QP+ AG +T+AES
Sbjct: 4 INVYSLKGDITEEIE--LPEIFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAES 61
Query: 294 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 473
+G+GR A +PRV+G S + AF GGR P + +H
Sbjct: 62 FGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPRVNTIYHEKINKKERTLAIRS 116
Query: 474 XXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 635
+ RGH + ++ ++P V+ D+++ + TK+ + L DI
Sbjct: 117 AIAATANKELVEQRGHQVSELEQIPFVIDDEIETVKTTKETREIFKDLGIMDDI 170
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 74.5 bits (175), Expect = 2e-12
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +3
Query: 198 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 344
D+VN VH ++ KN QPY VS+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGTGRARGPMPRVRGGG 73
Score = 33.5 bits (73), Expect = 4.4
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +3
Query: 564 KVQEINKTKQAVIFLRRLKAWSDI 635
KV+ KTK+ V+ L++LKAW+DI
Sbjct: 98 KVEGYKKTKEEVLLLKKLKAWNDI 121
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 72.9 bits (171), Expect = 6e-12
Identities = 29/41 (70%), Positives = 39/41 (95%)
Frame = +3
Query: 513 RGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 635
RG++++ + E+PLVV+DK+QEINKTKQAVIFLRR+KAWSD+
Sbjct: 5 RGYVVDNVSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDV 45
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 72.9 bits (171), Expect = 6e-12
Identities = 49/165 (29%), Positives = 71/165 (43%), Gaps = 2/165 (1%)
Frame = +3
Query: 147 QGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG--TGRAVAR 320
+G LP VF P R DL+ + + + QP AG SA+S TG AR
Sbjct: 12 KGKEITLPPVFGTPYRRDLIKKAYTILDTHHFQPKGTHPTAGMDVSADSLNPPTGHGQAR 71
Query: 321 IPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXX 500
I R++GGG R G+ RGGR P K + H
Sbjct: 72 IARMKGGGGRRRGEAGEVASIRGGRQAHPPKVQKVIHKKINKKEKKLALCSAIAATASKS 131
Query: 501 XXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 635
RGHII+ I ELP+V++D ++ ++K + L L ++D+
Sbjct: 132 TVAGRGHIIDGI-ELPIVISDDIESVSKASEVRKILSALGLFADV 175
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 72.9 bits (171), Expect = 6e-12
Identities = 43/157 (27%), Positives = 70/157 (44%)
Frame = +3
Query: 165 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 344
LP +F P+R DL+ V ++ +S QP AG +TSAES+G +AR+PRV+
Sbjct: 25 LPIIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINLGMARVPRVK--- 81
Query: 345 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 524
SG+ A GGR+ P ++ +ARGH+
Sbjct: 82 --NSGEAALAPNTVGGRLAFPPSVNKKLAEEANVKEKRLAVISALSATADIAFVRARGHV 139
Query: 525 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 635
+ P+VV D + + T + FL+++ + D+
Sbjct: 140 FKDSVRFPIVVTDDIVNLKTTSEVEEFLKKIGVYDDV 176
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 67.7 bits (158), Expect = 2e-10
Identities = 42/157 (26%), Positives = 68/157 (43%)
Frame = +3
Query: 165 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 344
LP VF RPD++ +++ + RQPY + +G S E+WG G AR+PR + G
Sbjct: 18 LPEVFAEEFRPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWGPGHGYARVPRWKLG- 76
Query: 345 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 524
+ GGR P KP R+W + R H+
Sbjct: 77 ----RRAVVVPQAVGGRRAHPPKPERKWAEKINKKEMRKALKSAIAATANEELVRQRSHV 132
Query: 525 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 635
E ELP VV+++++ + +TK R + ++D+
Sbjct: 133 FE--GELPKVVSNELESVKRTKDVAEVFRAIGVYADV 167
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 66.9 bits (156), Expect = 4e-10
Identities = 51/171 (29%), Positives = 70/171 (40%), Gaps = 9/171 (5%)
Frame = +3
Query: 150 GAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPR 329
GA+ +P VF +PIR D+VN VH ++KN + + + A PR
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKNDSTTDEIQLCFLLDSQGKRTPCTDVPATKPR 74
Query: 330 VRGGGTHRSGQGAFGNMCRGGRMFAPTK---------PWRRWHXXXXXXXXXXXXXXXXX 482
G + +CR AP K WRRWH
Sbjct: 75 PSPGAP--VARSLVFRVCRAVVPTAPVKGRSVTCAAVTWRRWHRRVNIKEKRYAVCSAIA 132
Query: 483 XXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 635
ARGH +E +PE+PLVV D I KT +AV L++L A++DI
Sbjct: 133 ASAVPSLLLARGHRVEGVPEVPLVVDDSASSIKKTAKAVELLKQLGAYADI 183
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 61.3 bits (142), Expect = 2e-08
Identities = 47/174 (27%), Positives = 75/174 (43%)
Frame = +3
Query: 114 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 293
V +YS E ++G LP VF +R D++ ++S + RQPY S AG + +
Sbjct: 5 VPIYSVSGE-MKGEID-LPEVFDTEVREDIIRRAFRAISLSMRQPYGSSPLAGMRRVGHT 62
Query: 294 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 473
G ++R+PR+ GG A GG+ + + +
Sbjct: 63 TRPGLGISRMPRIAGGSRVVGIASAV-----GGKSAHSPRTTKNLYVKINDRERKMAKYS 117
Query: 474 XXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 635
+ RGH ++ +LP+VV D V+ INKTK A+ L+ L + DI
Sbjct: 118 AIALTASVEAVKKRGHRFKEGLKLPIVVEDGVEGINKTKDAIALLKNLGVYEDI 171
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 60.5 bits (140), Expect = 3e-08
Identities = 38/101 (37%), Positives = 51/101 (50%)
Frame = +3
Query: 111 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAE 290
+V VY E+ LP +F+ P+R DL+ +S QP AG +TSA
Sbjct: 15 IVPVYDERGGEKDSVV--LPQIFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAV 72
Query: 291 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 413
S G GR VAR+PR++G S + A NM RGGR P +
Sbjct: 73 SLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPR 108
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 58.0 bits (134), Expect = 2e-07
Identities = 24/42 (57%), Positives = 35/42 (83%)
Frame = +3
Query: 510 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 635
++GH I ++PELPLVV DKV+ KT++AV+ L++LKAW+DI
Sbjct: 2 SKGHRIGEVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDI 43
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 57.6 bits (133), Expect = 2e-07
Identities = 44/157 (28%), Positives = 68/157 (43%)
Frame = +3
Query: 165 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 344
LP VF+ P+R DL+ + N +Q Y + AG +T AES+G+GR A +P+ + G
Sbjct: 18 LPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPK-QDGR 76
Query: 345 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 524
R Q GR P K + RGH
Sbjct: 77 ARRVPQAV------KGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHE 130
Query: 525 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 635
++ E+P+VV+D +++ KT++ V L L +DI
Sbjct: 131 FDR-DEVPVVVSDDFEDLVKTQEVVSLLEALDVHADI 166
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 46.8 bits (106), Expect = 4e-04
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +3
Query: 510 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 632
ARGH IE +PELPLV+ D + + KT A+ L++ A+ D
Sbjct: 2 ARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQFDAYLD 42
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 46.8 bits (106), Expect = 4e-04
Identities = 45/162 (27%), Positives = 68/162 (41%), Gaps = 11/162 (6%)
Frame = +3
Query: 165 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA------ESWGT--GRAVAR 320
LP F IR D++ +++ + RQPY S AG Q SA SW T GR ++R
Sbjct: 18 LPPQFNEKIRFDVIKRAFLAIQSHKRQPYGASPIAGKQHSAWTSKRRRSWRTSYGRGISR 77
Query: 321 IPRV---RGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXX 491
+ R R G +G + P K + W+
Sbjct: 78 VSRAILRRHGALFYWVARNIAQAVKGKKAHPP-KAEKDWYEKINKKERRLAIRSALAATK 136
Query: 492 XXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRL 617
+ARGHII+K +P+VV D ++++ KTK+ L +L
Sbjct: 137 ELDLVKARGHIIDK--PVPIVV-DGLEQLRKTKEIQQLLLKL 175
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 44.8 bits (101), Expect = 0.002
Identities = 42/152 (27%), Positives = 54/152 (35%), Gaps = 7/152 (4%)
Frame = +3
Query: 138 ETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK-------EAGHQTSAESW 296
E G A LP VF IR DL+ ++ N RQ Y + +AG + S E W
Sbjct: 41 EAKNGKAVTLPDVFSGEIREDLIRRAVLASRANRRQSYGHREHDGKRKPQAGMKHSVEWW 100
Query: 297 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 476
G GR V+RI R G T A RGGR K + W
Sbjct: 101 GKGRGVSRIMRKAGQRT-----AAQNPHTRGGRRAHGPKVDKDWSQKINSKENRIARDSA 155
Query: 477 XXXXXXXXXXQARGHIIEKIPELPLVVADKVQ 572
RGH E P+++ V+
Sbjct: 156 IAASASSNLVSERGHHFEASLRFPIIIDGYVE 187
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 42.7 bits (96), Expect = 0.007
Identities = 32/92 (34%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Frame = +2
Query: 341 WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGLGGSRCCYRRPSARSG*RT 520
W VR C+R HV WW +VR E L LAP QP A L C R A +G
Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP--APEALRCGVCARRVVCAVAGDVA 191
Query: 521 HY*KDSRA--SLGCSRQSPRDQQDQTGCHLPE 610
RA + G P ++D+ G +PE
Sbjct: 192 RPPDRQRAGGAAGGGGLDPGLREDEGGYGVPE 223
>UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_113, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 145
Score = 41.1 bits (92), Expect = 0.022
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +3
Query: 510 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 635
ARGH IE + ELPLV+ D + ++KT + L+++ A D+
Sbjct: 24 ARGHRIESVLELPLVIGDSTKSVDKTSTTIDILKQVGACPDV 65
>UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687;
n=1; Homo sapiens|Rep: CDNA FLJ46551 fis, clone
THYMU3038687 - Homo sapiens (Human)
Length = 189
Score = 37.5 bits (83), Expect = 0.27
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = +2
Query: 302 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGL 466
WT CR +AC W W++ V +GC W + H R+P E L
Sbjct: 79 WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138
Query: 467 GGSRCCYRRPSARS 508
G+ C P+ RS
Sbjct: 139 HGAPSCLSTPAPRS 152
>UniRef50_Q9VDD2 Cluster: CG17299-PF, isoform F; n=18; Diptera|Rep:
CG17299-PF, isoform F - Drosophila melanogaster (Fruit
fly)
Length = 1400
Score = 35.9 bits (79), Expect = 0.82
Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = +3
Query: 141 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 314
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 670 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 728
Query: 315 ARIPRVRGGGTHRSGQGAFGNMCRGGRM 398
+ GG +GQGA G GG M
Sbjct: 729 SSAAGGAGGAAAAAGQGAAGG--AGGLM 754
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 1.1
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +3
Query: 315 ARIPRVRGGGTHRSGQGAFGNMCRGG 392
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 263
Score = 35.5 bits (78), Expect = 1.1
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -3
Query: 399 TYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQP 265
TY+ H Y +HP T+ YHH H + ++ Q+P + H + P
Sbjct: 114 TYLTHR--YHQHPQVTHRYHHQ-HPQVTHRYHQHPQVTHRYHQHP 155
Score = 33.9 bits (74), Expect = 3.3
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -3
Query: 375 YRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQP 265
Y +HP T+ YHH R H Q P I H + P
Sbjct: 75 YHQHPQVTHRYHHQHPQVTYRYHHQQPQITHRYHQHP 111
Score = 33.1 bits (72), Expect = 5.8
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = -3
Query: 399 TYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 262
T + +++HP T+ YHH H + ++ Q+P + H + Q P
Sbjct: 3 TPTSYSQLFQQHPQVTHHYHHQ-HPQVTHRYHQHPQVTHRYQYQHP 47
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 34.7 bits (76), Expect = 1.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 387 HDTCYRRHPDRTYEYHHHGHAEFGRQH 307
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01599.1 - Gibberella zeae PH-1
Length = 1347
Score = 33.9 bits (74), Expect = 3.3
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -3
Query: 396 YVHHD-TCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 283
Y H+D Y +H D + HHHG +G H + +H
Sbjct: 478 YDHNDYNYYHKHHDNKHYDHHHGDKHYGHHHEHHKHYEH 516
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 33.9 bits (74), Expect = 3.3
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +3
Query: 285 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 395
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 33.5 bits (73), Expect = 4.4
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -3
Query: 372 RRHPDRTYEYHHHGHAEFGRQHVQ-YPMIQHWF 277
R PD + +HHHGH G HV+ YP F
Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYPATDSLF 213
>UniRef50_A1FG00 Cluster: Putative uncharacterized protein; n=1;
Pseudomonas putida W619|Rep: Putative uncharacterized
protein - Pseudomonas putida W619
Length = 852
Score = 33.5 bits (73), Expect = 4.4
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 415 PGGVGTVASTSDSGERPWRQPLLLPASQRSFRLEDTLLKRFPSFP 549
P V +V SD G WRQ L + + FRL LK P+ P
Sbjct: 321 PAFVSSVVKVSDRGPYTWRQALAISDAALKFRLNIGKLKASPALP 365
>UniRef50_Q7QNZ3 Cluster: GLP_149_9791_7437; n=2; Giardia lamblia
ATCC 50803|Rep: GLP_149_9791_7437 - Giardia lamblia ATCC
50803
Length = 784
Score = 33.1 bits (72), Expect = 5.8
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 96 SVARPLVSVYSEKS--ETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 269
SVA P VYS+++ T +P P + + P ++ V + + + S+ PY +S+ +
Sbjct: 350 SVASP--PVYSDRAPHSTDFQRLRPAPLLPQTPSSDSNISLVTLPLGQESKDPYSLSRTS 407
Query: 270 GHQTSAESWGTGRAVARIPR 329
Q SA + R A+ PR
Sbjct: 408 LSQNSATTTNEFRVSAKTPR 427
>UniRef50_A4RCN1 Cluster: Putative uncharacterized protein; n=2;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 578
Score = 33.1 bits (72), Expect = 5.8
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -3
Query: 405 GRTYVH-HDTCYRRHPDRTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDQ 268
GR++ H H TC +HP + +HHH H H P H + D+
Sbjct: 455 GRSHNHDHHTC-GQHPSHHHHHHHHHHCSVSHSVHCDDPNHHHEYEDE 501
>UniRef50_P04196 Cluster: Histidine-rich glycoprotein precursor;
n=19; Eutheria|Rep: Histidine-rich glycoprotein
precursor - Homo sapiens (Human)
Length = 525
Score = 33.1 bits (72), Expect = 5.8
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -3
Query: 390 HHDTCYRRHPDRTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDQPPC 259
HH + H T+ H HGH G H +P H G P C
Sbjct: 364 HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC 408
>UniRef50_UPI0000F2E6E2 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 293
Score = 32.7 bits (71), Expect = 7.6
Identities = 18/37 (48%), Positives = 19/37 (51%)
Frame = +2
Query: 401 RPHEALAALAPSRQPPTAESGLGGSRCCYRRPSARSG 511
RP A AA P RQ P E GGS Y P+ RSG
Sbjct: 122 RPGPAQAARPPPRQWPCTECPGGGSGVVYHLPTERSG 158
>UniRef50_A3UKR0 Cluster: Probable C-5 cytosine-specific DNA
methylase; n=1; Oceanicaulis alexandrii HTCC2633|Rep:
Probable C-5 cytosine-specific DNA methylase -
Oceanicaulis alexandrii HTCC2633
Length = 681
Score = 32.7 bits (71), Expect = 7.6
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = +3
Query: 150 GAAKPLPFVFKAPIRPDLVNDVHVS----MSKNSRQPYCVSKEAGHQTSAESWGTGRAVA 317
G + F++K P +PD + HV+ +N+ +P+ + E H +A G A
Sbjct: 427 GEEDNVTFLYKHPAQPDALQVAHVAPHIMTMRNAGKPFTAANEPTHTVTAGGAGLSLVAA 486
Query: 318 RIPRVRGGGTHRSGQG 365
+ + GG S G
Sbjct: 487 FMAQHNGGANMESHAG 502
>UniRef50_A1HES9 Cluster: Putative uncharacterized protein; n=1;
Ralstonia pickettii 12J|Rep: Putative uncharacterized
protein - Ralstonia pickettii 12J
Length = 453
Score = 32.7 bits (71), Expect = 7.6
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 231 KNSRQPYCVSKEAGH-QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC-RGGRM 398
+N+ P V+KEAGH Q +A G V R+ + GTH G+G GN RGG +
Sbjct: 49 ENAHGPQHVAKEAGHLQAAAFGNGLDHQVGRVADI-SVGTHEHGRG--GNRAQRGGAL 103
>UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phytofirmans PsJN|Rep: Putative
uncharacterized protein - Burkholderia phytofirmans PsJN
Length = 753
Score = 32.7 bits (71), Expect = 7.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 402 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQ 310
R + HHD C R R ++HHHGH GR+
Sbjct: 478 RDHHHHDRCLRDR--RRRDHHHHGHRLRGRR 506
>UniRef50_Q2H7T6 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 455
Score = 32.7 bits (71), Expect = 7.6
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = -1
Query: 614 APQEDDSLFGLVDLLDFVGYNQGKLGNLFNNVSSSLNERWDAGSSNGCRQGRSPLSEVDA 435
A Q D S+F L ++ + L N + +SSL RWD+G +N CR+ P+ E DA
Sbjct: 25 ADQADLSVFALGGKINLSTVTEA-LSNA--SETSSLVIRWDSGDTNHCRKVSLPVVESDA 81
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,733,111
Number of Sequences: 1657284
Number of extensions: 13309943
Number of successful extensions: 46607
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 42962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46094
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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