Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19e04
(574 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060815-1|AAL28363.1| 873|Drosophila melanogaster GH28601p pro... 36 0.039
AE014298-804|AAF46090.2| 873|Drosophila melanogaster CG15765-PA... 36 0.039
AE014297-1476|AAF54775.1| 588|Drosophila melanogaster CG4066-PA... 34 0.16
AE014296-988|AAN12103.1| 460|Drosophila melanogaster CG32414-PA... 32 0.63
AE014296-955|AAF50778.2| 1175|Drosophila melanogaster CG4835-PA ... 32 0.63
AE013599-1792|AAF58320.2| 8805|Drosophila melanogaster CG18076-P... 30 2.6
S63550-1|AAB27433.1| 921|Drosophila melanogaster transcription ... 29 4.5
AY075448-1|AAL68261.2| 218|Drosophila melanogaster RE09269p pro... 29 4.5
AE014298-2797|AAF48914.2| 193|Drosophila melanogaster CG14191-P... 29 4.5
AE014296-2639|AAF49536.1| 921|Drosophila melanogaster CG5444-PB... 29 4.5
AE014296-2638|AAF49535.1| 921|Drosophila melanogaster CG5444-PA... 29 4.5
BT011438-1|AAR99096.1| 474|Drosophila melanogaster RE74613p pro... 29 5.9
AY061346-1|AAL28894.1| 474|Drosophila melanogaster LD27791p pro... 29 5.9
AE014134-2543|ABI31318.1| 363|Drosophila melanogaster CG4482-PE... 29 5.9
AE014134-2542|AAF53424.1| 363|Drosophila melanogaster CG4482-PB... 29 5.9
AE014134-2541|ABI31316.1| 474|Drosophila melanogaster CG4482-PD... 29 5.9
AE014134-2540|ABI31317.1| 474|Drosophila melanogaster CG4482-PC... 29 5.9
AE014134-2539|AAF53425.2| 474|Drosophila melanogaster CG4482-PA... 29 5.9
AE014134-1714|AAS64673.2| 1701|Drosophila melanogaster CG33300-P... 29 5.9
AE014297-426|AAF51896.2| 171|Drosophila melanogaster CG15597-PA... 28 7.8
>AY060815-1|AAL28363.1| 873|Drosophila melanogaster GH28601p
protein.
Length = 873
Score = 35.9 bits (79), Expect = 0.039
Identities = 38/172 (22%), Positives = 55/172 (31%), Gaps = 1/172 (0%)
Frame = +3
Query: 45 LRTPS-LMNLKGLTMILRRLMNLTLRVIVKRKTKNPVKTGQI*SGKLRKRTKKTVTSIEM 221
LRT + + K M L TL T P T + T K V +
Sbjct: 418 LRTMAPIPEAKSPAMTTTTLKTTTLATPATATTTTPATTTTATAATEVVTTPKAVDTTSS 477
Query: 222 TSTGNVKDETNNARTTLMREPPRKANMTSLIIKVLVQTTKALVQIIKVRAQTIRAPVIKA 401
+ T RTT + A T + TTK V +T + I+A
Sbjct: 478 QAPATTTRPTTTVRTTTITTTTTTATTTPKTEETTTTTTKKPEPTTMVAPRTTKTSAIEA 537
Query: 402 LQRTVAALPRTGISTTNHPTMTDTTRVTISPLVKTKTRNILVTINHTNGHAM 557
AA TG +T T TT + + T + + +N + M
Sbjct: 538 AAAAAAAAAATGTTTVATSAETPTTTTSTAAAATATTTSHATPTDKSNSNNM 589
>AE014298-804|AAF46090.2| 873|Drosophila melanogaster CG15765-PA
protein.
Length = 873
Score = 35.9 bits (79), Expect = 0.039
Identities = 38/172 (22%), Positives = 55/172 (31%), Gaps = 1/172 (0%)
Frame = +3
Query: 45 LRTPS-LMNLKGLTMILRRLMNLTLRVIVKRKTKNPVKTGQI*SGKLRKRTKKTVTSIEM 221
LRT + + K M L TL T P T + T K V +
Sbjct: 418 LRTMAPIPEAKSPAMTTTTLKTTTLATPATATTTTPATTTTATAATEVVTTPKAVDTTSS 477
Query: 222 TSTGNVKDETNNARTTLMREPPRKANMTSLIIKVLVQTTKALVQIIKVRAQTIRAPVIKA 401
+ T RTT + A T + TTK V +T + I+A
Sbjct: 478 QAPATTTRPTTTVRTTTITTTTTTATTTPKTEETTTTTTKKPEPTTMVAPRTTKTSAIEA 537
Query: 402 LQRTVAALPRTGISTTNHPTMTDTTRVTISPLVKTKTRNILVTINHTNGHAM 557
AA TG +T T TT + + T + + +N + M
Sbjct: 538 AAAAAAAAAATGTTTVATSAETPTTTTSTAAAATATTTSHATPTDKSNSNNM 589
>AE014297-1476|AAF54775.1| 588|Drosophila melanogaster CG4066-PA
protein.
Length = 588
Score = 33.9 bits (74), Expect = 0.16
Identities = 35/133 (26%), Positives = 52/133 (39%), Gaps = 2/133 (1%)
Frame = +3
Query: 180 LRKRTKKTVTSIEMTSTGNVKDETNNARTTLMREPPRKANMTSLIIKVLVQTT-KALVQI 356
L T T+ SI S+ T+++ + T+ L TT +A +I
Sbjct: 76 LTTTTSTTLASISTHSSTTATTTTDSSTSHSKTNDSTTDESTTTDFATLSSTTAQASTRI 135
Query: 357 IKVRAQTIRAPVIKALQRTVAALPRTGISTTNHPTMTDTTRVTISPLVKTKTR-NILVTI 533
+K T + T P T STTN+ T T+TT V + T +R L T
Sbjct: 136 LKTTVSTTSSTTT-----TSTTSPSTSDSTTNNSTTTETTTVPTTSASTTDSRLTSLSTT 190
Query: 534 NHTNGHAMTAENT 572
+ T + T E T
Sbjct: 191 DSTTSDSTTNEIT 203
>AE014296-988|AAN12103.1| 460|Drosophila melanogaster CG32414-PA
protein.
Length = 460
Score = 31.9 bits (69), Expect = 0.63
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -3
Query: 215 DRSYGLFC--PLPQLPALNLTSLYRILRLPLHYHPKRQIHQTPQNHSQTLQIHQTRR 51
DR+Y +F PL A N S I PL HP + +HQ P +H Q Q Q ++
Sbjct: 361 DRNYVVFSSGPLRSQSAENTFSSQPIYD-PLPRHPPQPLHQPPMHHQQQQQQQQQQQ 416
>AE014296-955|AAF50778.2| 1175|Drosophila melanogaster CG4835-PA
protein.
Length = 1175
Score = 31.9 bits (69), Expect = 0.63
Identities = 29/114 (25%), Positives = 42/114 (36%), Gaps = 7/114 (6%)
Frame = +3
Query: 192 TKKTVTSIEMTSTGNVKDETNNARTTLMREPPRKANMTSLIIKVLVQTTKALVQIIKVRA 371
T +T T+ TS + T + T EP T+ + TT++ +
Sbjct: 975 TPQTTTTESTTSKTTTTESTIISTTPTTTEPTTPKTTTTESTTIPTTTTESTTATTTPQT 1034
Query: 372 QTIRAPVIKALQRT-------VAALPRTGISTTNHPTMTDTTRVTISPLVKTKT 512
T + I +T V+ P T STT T T T T+S KT T
Sbjct: 1035 TTTESTTISTTPKTTTTESTTVSTTPTTTESTTISTTPTTTEPTTVSTTPKTTT 1088
>AE013599-1792|AAF58320.2| 8805|Drosophila melanogaster CG18076-PH,
isoform H protein.
Length = 8805
Score = 29.9 bits (64), Expect = 2.6
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Frame = +3
Query: 192 TKKTVTSIEMTSTGNVKDETNNARTTLMREPPRKANMTS--LIIKVLVQTTKALVQIIKV 365
T T T+I T+T + ++ T ++E P + S K + QTT K
Sbjct: 3305 TTVTTTTITTTTTSSSEETLPQENTATVKETPLNEPVPSSPAETKEIEQTTN---DDQKK 3361
Query: 366 RAQTIRAPVIKALQRTVAALPRTGISTTNHPTMTDTTRVTI 488
+ + Q+ V +P IST+ T+T TT+ TI
Sbjct: 3362 PEEIVDTEKKTTEQKPVETIPTEPISTSETTTVTLTTKTTI 3402
>S63550-1|AAB27433.1| 921|Drosophila melanogaster transcription
initiation factorTFIID 110 kda protein.
Length = 921
Score = 29.1 bits (62), Expect = 4.5
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Frame = +3
Query: 321 VLVQTTKALVQIIKVRAQTIRAPVIKALQRTVAALPRTGISTTNHPTMT----DTTRVTI 488
+LV+T Q+++V T V + + T T STTNHPT T T
Sbjct: 151 LLVKTDNGF-QLLRVGTTTGPPTVTQTITNTSNNSNTT--STTNHPTTTQIRLQTVPAAA 207
Query: 489 SPLVKTKTRNILVTINHTNGHAMTAE 566
S T T NI+V ++G+A +++
Sbjct: 208 SMTNTTATSNIIVNSVASSGYANSSQ 233
>AY075448-1|AAL68261.2| 218|Drosophila melanogaster RE09269p
protein.
Length = 218
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -3
Query: 488 YGHSCGVGHGGMICGAYPGSWKGCYCSLKGFYDWSSYG 375
YG G GHGG G Y G G Y G WSS G
Sbjct: 118 YGGGYGGGHGGGYGGGYGGGSSGGYSGGHG-GGWSSGG 154
>AE014298-2797|AAF48914.2| 193|Drosophila melanogaster CG14191-PA
protein.
Length = 193
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -3
Query: 488 YGHSCGVGHGGMICGAYPGSWKGCYCSLKGFYDWSSYG 375
YG G GHGG G Y G G Y G WSS G
Sbjct: 93 YGGGYGGGHGGGYGGGYGGGSSGGYSGGHG-GGWSSGG 129
>AE014296-2639|AAF49536.1| 921|Drosophila melanogaster CG5444-PB,
isoform B protein.
Length = 921
Score = 29.1 bits (62), Expect = 4.5
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Frame = +3
Query: 321 VLVQTTKALVQIIKVRAQTIRAPVIKALQRTVAALPRTGISTTNHPTMT----DTTRVTI 488
+LV+T Q+++V T V + + T T STTNHPT T T
Sbjct: 151 LLVKTDNGF-QLLRVGTTTGPPTVTQTITNTSNNSNTT--STTNHPTTTQIRLQTVPAAA 207
Query: 489 SPLVKTKTRNILVTINHTNGHAMTAE 566
S T T NI+V ++G+A +++
Sbjct: 208 SMTNTTATSNIIVNSVASSGYANSSQ 233
>AE014296-2638|AAF49535.1| 921|Drosophila melanogaster CG5444-PA,
isoform A protein.
Length = 921
Score = 29.1 bits (62), Expect = 4.5
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Frame = +3
Query: 321 VLVQTTKALVQIIKVRAQTIRAPVIKALQRTVAALPRTGISTTNHPTMT----DTTRVTI 488
+LV+T Q+++V T V + + T T STTNHPT T T
Sbjct: 151 LLVKTDNGF-QLLRVGTTTGPPTVTQTITNTSNNSNTT--STTNHPTTTQIRLQTVPAAA 207
Query: 489 SPLVKTKTRNILVTINHTNGHAMTAE 566
S T T NI+V ++G+A +++
Sbjct: 208 SMTNTTATSNIIVNSVASSGYANSSQ 233
>BT011438-1|AAR99096.1| 474|Drosophila melanogaster RE74613p
protein.
Length = 474
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 134 PLHYHPKRQIHQTPQNHSQ 78
PLH HP +Q HQ Q+H Q
Sbjct: 393 PLHQHPLQQHHQHHQHHHQ 411
>AY061346-1|AAL28894.1| 474|Drosophila melanogaster LD27791p
protein.
Length = 474
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 134 PLHYHPKRQIHQTPQNHSQ 78
PLH HP +Q HQ Q+H Q
Sbjct: 393 PLHQHPLQQHHQHHQHHHQ 411
>AE014134-2543|ABI31318.1| 363|Drosophila melanogaster CG4482-PE,
isoform E protein.
Length = 363
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 134 PLHYHPKRQIHQTPQNHSQ 78
PLH HP +Q HQ Q+H Q
Sbjct: 282 PLHQHPLQQHHQHHQHHHQ 300
>AE014134-2542|AAF53424.1| 363|Drosophila melanogaster CG4482-PB,
isoform B protein.
Length = 363
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 134 PLHYHPKRQIHQTPQNHSQ 78
PLH HP +Q HQ Q+H Q
Sbjct: 282 PLHQHPLQQHHQHHQHHHQ 300
>AE014134-2541|ABI31316.1| 474|Drosophila melanogaster CG4482-PD,
isoform D protein.
Length = 474
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 134 PLHYHPKRQIHQTPQNHSQ 78
PLH HP +Q HQ Q+H Q
Sbjct: 393 PLHQHPLQQHHQHHQHHHQ 411
>AE014134-2540|ABI31317.1| 474|Drosophila melanogaster CG4482-PC,
isoform C protein.
Length = 474
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 134 PLHYHPKRQIHQTPQNHSQ 78
PLH HP +Q HQ Q+H Q
Sbjct: 393 PLHQHPLQQHHQHHQHHHQ 411
>AE014134-2539|AAF53425.2| 474|Drosophila melanogaster CG4482-PA,
isoform A protein.
Length = 474
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 134 PLHYHPKRQIHQTPQNHSQ 78
PLH HP +Q HQ Q+H Q
Sbjct: 393 PLHQHPLQQHHQHHQHHHQ 411
>AE014134-1714|AAS64673.2| 1701|Drosophila melanogaster CG33300-PA
protein.
Length = 1701
Score = 28.7 bits (61), Expect = 5.9
Identities = 37/159 (23%), Positives = 52/159 (32%), Gaps = 5/159 (3%)
Frame = +3
Query: 111 TLRVIVKRKTKNPVKTGQI*SGKLRKRTKKTVTSIEMTSTGNVKDETNNART---TLMRE 281
T RV +R T+ P + T K T+ + T K T T T +
Sbjct: 1125 TKRVTTERTTREPTTRKTTTHKTTEEPTTKKTTTKKTTHEPTTKKSTTLKPTEEPTTRKT 1184
Query: 282 PPRKANMTSLIIKVLVQ-TTKALVQIIKVRAQTIRAPVIK-ALQRTVAALPRTGISTTNH 455
K +V + TT+ +T P K + P T STT
Sbjct: 1185 STTKTTREPTTKRVTTERTTREPTTRKTTTHKTTEEPTTKKTTTKKTTHEPTTKKSTTLK 1244
Query: 456 PTMTDTTRVTISPLVKTKTRNILVTINHTNGHAMTAENT 572
PT TTR T++ + VT T T + T
Sbjct: 1245 PTEEPTTRKTLTTKTTREPTTKRVTTERTTREPTTRKTT 1283
Score = 28.3 bits (60), Expect = 7.8
Identities = 34/128 (26%), Positives = 47/128 (36%), Gaps = 1/128 (0%)
Frame = +3
Query: 192 TKKTVTSIEMTSTGNVKDETNNARTTLMREPPRKANMTSLIIKVLVQTTKALVQIIKVRA 371
T K T+++ T + +T+ +TT REP K T +TTK
Sbjct: 956 TTKKSTTLKPTEEPTTR-KTSTTKTT--REPTTKRKTTE-------RTTKEPTTRKTTTH 1005
Query: 372 QTIRAPVI-KALQRTVAALPRTGISTTNHPTMTDTTRVTISPLVKTKTRNILVTINHTNG 548
+T P K + P T STT PT TTR T + + VT T
Sbjct: 1006 KTTEEPTTNKTTTKKTTHEPTTKKSTTLKPTEEPTTRKTSTTKTTREPTTKRVTTERTTR 1065
Query: 549 HAMTAENT 572
T + T
Sbjct: 1066 EPTTRKTT 1073
>AE014297-426|AAF51896.2| 171|Drosophila melanogaster CG15597-PA
protein.
Length = 171
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 485 GHSCGVGHGGMICGAYPGSWKGCYCSLKGFY 393
G+ G G GG G+Y GS+ G Y G++
Sbjct: 138 GYGGGYGGGGWTSGSYGGSYAGGYGGQSGWW 168
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,525,773
Number of Sequences: 53049
Number of extensions: 254144
Number of successful extensions: 1423
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1401
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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