Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19e03
(250 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0572 - 4044610-4044658,4044754-4044857,4044942-4044944 95 9e-21
02_05_1078 + 33946902-33946904,33947006-33947109,33947206-33947254 95 9e-21
02_05_1076 + 33932543-33932545,33932643-33932746,33932859-33932907 95 9e-21
04_04_1353 - 32836301-32836340,32836514-32836657,32836948-328370... 31 0.17
11_06_0478 + 24073295-24074172,24074790-24075090 29 0.69
09_02_0565 + 10710770-10711003,10711368-10711527,10712277-107124... 29 0.69
12_01_0282 - 2088302-2089081 27 2.1
11_01_0273 - 2048527-2049297 27 2.1
07_03_0054 + 12848425-12848593,12850106-12850278 27 2.8
02_05_0366 - 28313190-28313601,28313759-28314225,28315044-283157... 27 2.8
07_01_0921 + 7753744-7753821,7753921-7754856,7755285-7755377,775... 26 3.7
01_03_0025 + 11739930-11740493,11740820-11741020,11741143-117412... 26 3.7
08_02_0946 + 22880399-22880600,22881588-22881650,22881786-228817... 26 4.8
06_03_0375 + 20052687-20053214,20053943-20054110,20054272-200543... 26 4.8
12_02_0825 + 23476943-23476952,23477263-23477328,23477737-234778... 25 6.4
04_03_0998 - 21555696-21556080,21556177-21556254,21556333-215564... 25 6.4
01_05_0120 - 18349131-18349880,18349972-18350259,18350383-18350568 25 6.4
10_01_0133 + 1621574-1625779 25 8.5
04_04_0930 - 29480700-29480853,29481007-29483036 25 8.5
02_05_0046 - 25398412-25398594,25399022-25399060,25399896-254003... 25 8.5
>06_01_0572 - 4044610-4044658,4044754-4044857,4044942-4044944
Length = 51
Score = 94.7 bits (225), Expect = 9e-21
Identities = 40/49 (81%), Positives = 45/49 (91%)
Frame = +3
Query: 39 MSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKL 185
M +HKTF IK+KLAKK++QNRPIP W+RMRT NTIRYNAKRRHWRRTKL
Sbjct: 1 MPSHKTFQIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 49
>02_05_1078 + 33946902-33946904,33947006-33947109,33947206-33947254
Length = 51
Score = 94.7 bits (225), Expect = 9e-21
Identities = 40/49 (81%), Positives = 45/49 (91%)
Frame = +3
Query: 39 MSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKL 185
M +HKTF IK+KLAKK++QNRPIP W+RMRT NTIRYNAKRRHWRRTKL
Sbjct: 1 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 49
>02_05_1076 + 33932543-33932545,33932643-33932746,33932859-33932907
Length = 51
Score = 94.7 bits (225), Expect = 9e-21
Identities = 40/49 (81%), Positives = 45/49 (91%)
Frame = +3
Query: 39 MSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKL 185
M +HKTF IK+KLAKK++QNRPIP W+RMRT NTIRYNAKRRHWRRTKL
Sbjct: 1 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 49
>04_04_1353 -
32836301-32836340,32836514-32836657,32836948-32837023,
32838281-32838351,32838552-32838623,32839347-32839474,
32839561-32839637,32839712-32839805,32840239-32840324,
32840836-32840911,32841004-32841318
Length = 392
Score = 30.7 bits (66), Expect = 0.17
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = -3
Query: 248 FFLTLQGFY*ITFNTFTSLQLELCPSPVTPLSVISNSVSCAHPYPLRNGSVLFQLFGQFA 69
FFL +QGF ++ +L+ S V ++++++ ++ + P P + LFG+F
Sbjct: 211 FFLVVQGFLVGSYGLTWALKNS---SKVLKVAILNSPLTVSSPVPGLFNQLRLPLFGEFT 267
Query: 68 LNNKRLMGRHFEQSS 24
N L R E S
Sbjct: 268 CQNAVLAERFIEAGS 282
>11_06_0478 + 24073295-24074172,24074790-24075090
Length = 392
Score = 28.7 bits (61), Expect = 0.69
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +1
Query: 22 QLDCSKCRPIRRLLLSANWPKS*NKTDPFLSG*GCAQETLF 144
QL C C + LSA WP K D F S G +E +F
Sbjct: 207 QLFCLMCWQVEYQYLSAEWPPPSYKIDAFSSRTGRWEERVF 247
>09_02_0565 +
10710770-10711003,10711368-10711527,10712277-10712477,
10712564-10712628,10712740-10712767,10712847-10712923,
10713023-10713109,10713572-10713622,10713857-10713937,
10714125-10714346,10714424-10714517,10714608-10714748,
10716383-10716444,10716519-10717106
Length = 696
Score = 28.7 bits (61), Expect = 0.69
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 51 KTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKR 161
K IIKR+ AK+L+Q P++ + TG +AKR
Sbjct: 214 KETIIKREAAKRLEQTSEEPEYAPLPTGPGAVADAKR 250
>12_01_0282 - 2088302-2089081
Length = 259
Score = 27.1 bits (57), Expect = 2.1
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -3
Query: 182 LCPS-PVTPLSVISNSVSCAHPYPLRNGSVLFQLFGQFALNNKRLM-GRHFEQSS 24
LCP P TPL + V HP+ LR + +L+N RL+ GR SS
Sbjct: 37 LCPYLPATPLPTSTTVVILHHPHALRRNPLSTLPLLARSLSNLRLIPGRRLLPSS 91
>11_01_0273 - 2048527-2049297
Length = 256
Score = 27.1 bits (57), Expect = 2.1
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -3
Query: 182 LCPS-PVTPLSVISNSVSCAHPYPLRNGSVLFQLFGQFALNNKRLM-GRHFEQSS 24
LCP P TPL + V HP+ LR + +L+N RL+ GR SS
Sbjct: 37 LCPYLPATPLPTSTTVVVLHHPHALRRNPLSTLPLLARSLSNLRLIPGRRLLPSS 91
>07_03_0054 + 12848425-12848593,12850106-12850278
Length = 113
Score = 26.6 bits (56), Expect = 2.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -3
Query: 212 FNTFTSLQLELCPSPVTPLSVISNSVSCA 126
F T+ S+ +L PSP + L V S+SC+
Sbjct: 8 FTTYVSIVPDLRPSPRSHLCVNHGSISCS 36
>02_05_0366 -
28313190-28313601,28313759-28314225,28315044-28315782,
28316548-28316615,28316693-28316757,28316922-28320162,
28320239-28320301,28320756-28320824,28321020-28321055,
28322035-28322280,28322531-28322569,28322695-28322816,
28322921-28323004,28323100-28323235,28323486-28323535,
28323620-28323756,28323863-28323951,28324847-28324954,
28325080-28325163,28325841-28325888,28326036-28326153,
28328262-28328347
Length = 2168
Score = 26.6 bits (56), Expect = 2.8
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 3 FFHFVLTT*LFKMSAHKTFIIKRKLAKKL--KQNRPIPQWVRMRTGNTIRYNAKRR 164
+FH +TT +++ + + KRK K L + I W R + +N+KRR
Sbjct: 767 YFHVCITT--YRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRR 820
>07_01_0921 +
7753744-7753821,7753921-7754856,7755285-7755377,
7755462-7755815
Length = 486
Score = 26.2 bits (55), Expect = 3.7
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = -3
Query: 170 PVTPLSVISNSVSCAHPYPLRNGSVLFQLFGQFALNNKRLMGRHFEQSSCQNKVKK 3
PV +++ VSC P+ + Q G + +RL+G E+ + K +K
Sbjct: 88 PVGEMTITLQDVSCLWGLPIHGRPITGQADGSWVDMIERLLGIPMEEQHMKQKKRK 143
>01_03_0025 +
11739930-11740493,11740820-11741020,11741143-11741235,
11741355-11742125
Length = 542
Score = 26.2 bits (55), Expect = 3.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 117 VRMRTGNTIRYNAKRRHWRRTKLKL 191
++ R +R + RRHWRR L L
Sbjct: 75 IKARNSPLLRVSPFRRHWRRLSLSL 99
>08_02_0946 +
22880399-22880600,22881588-22881650,22881786-22881790,
22882143-22882253,22882339-22882443,22882529-22882609,
22883236-22883247,22883680-22883733,22884476-22884586,
22884789-22884935
Length = 296
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -3
Query: 191 QLELCPSPVTPLSVISNSVSCAHPYPLRNGSVL 93
Q LCP P+T +I N C YP + VL
Sbjct: 219 QSHLCPLPLTVQPIIWNYDHCLRLYPTPHTIVL 251
>06_03_0375 +
20052687-20053214,20053943-20054110,20054272-20054354,
20054541-20054610,20054973-20055077
Length = 317
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 176 PSPVTPLSVISNSVSCAHPYPLRNGSVLFQLFGQF 72
PSP P + ++ + A LR G V F FGQF
Sbjct: 53 PSPSEPTTAAASPATAAAAGALRVGIVGFGNFGQF 87
>12_02_0825 +
23476943-23476952,23477263-23477328,23477737-23477885,
23478148-23478212,23479247-23479710,23479724-23480208
Length = 412
Score = 25.4 bits (53), Expect = 6.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 71 ALNNKRLMGRHFEQSSCQNKVK 6
A N KRL+GR F +S Q+ +K
Sbjct: 24 AENAKRLIGRRFTDASVQSDIK 45
>04_03_0998 - 21555696-21556080,21556177-21556254,21556333-21556424,
21556524-21556620,21557113-21557141,21557620-21557781,
21557981-21558061,21558156-21558314,21558394-21558510,
21558598-21558666,21558753-21558831,21560884-21561050,
21561109-21561229,21561522-21561649,21562293-21562361,
21562408-21562539,21562619-21562991,21563274-21563398,
21563500-21563655,21563785-21564198,21564634-21564691,
21566522-21566648,21568047-21568305,21569005-21569104,
21569231-21569317,21569454-21569692,21569914-21569999,
21570409-21570532,21571111-21574332
Length = 2444
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 62 Y*AQIGQKAETKQTHSSVGKDAHRKHYSI*R*EASLEKD 178
Y A++ Q E +Q+HS AH+ H+ +S KD
Sbjct: 1679 YTARLTQDEERQQSHSMASTTAHQGHHPTSILSSSFVKD 1717
>01_05_0120 - 18349131-18349880,18349972-18350259,18350383-18350568
Length = 407
Score = 25.4 bits (53), Expect = 6.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 115 G*GCAQETLFDITLRGVTGEGQSSSCKLV 201
G A T+FDIT G +G++ S K V
Sbjct: 36 GLAAAVNTVFDITELGAVADGKTDSTKAV 64
>10_01_0133 + 1621574-1625779
Length = 1401
Score = 25.0 bits (52), Expect = 8.5
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 48 HKTFI-IKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRR 176
HK + + R++ KKLK + P+ G ++ N RRHW R
Sbjct: 392 HKELLDLGREIVKKLKFS-PL---AAKTVGRLLKKNLTRRHWSR 431
>04_04_0930 - 29480700-29480853,29481007-29483036
Length = 727
Score = 25.0 bits (52), Expect = 8.5
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 97 FCFSFLANLRLII 59
FCFSF+A+L LII
Sbjct: 9 FCFSFVASLALII 21
>02_05_0046 -
25398412-25398594,25399022-25399060,25399896-25400360,
25400758-25400816,25400920-25401748,25402554-25402898,
25402973-25403435,25403537-25403640,25403692-25403901,
25404933-25405088,25405774-25406052,25406237-25406986,
25407141-25407232,25407977-25408361,25408672-25408752,
25409196-25409354,25409399-25409506,25409604-25409666,
25409764-25409835,25409932-25410366
Length = 1758
Score = 25.0 bits (52), Expect = 8.5
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -1
Query: 100 LFCFSFLANLRLIINVLWADILNNQV 23
++ F F N I++V+W +IL ++
Sbjct: 286 VYLFEFHGNAHAIVSVIWTNILGKRL 311
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,910,266
Number of Sequences: 37544
Number of extensions: 99009
Number of successful extensions: 296
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 296
length of database: 14,793,348
effective HSP length: 61
effective length of database: 12,503,164
effective search space used: 262566444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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