Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19e02
(619 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 27 0.17
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 23 2.7
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 2.7
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 2.7
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 22 4.7
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 4.7
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 4.7
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 22 4.7
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 22 4.7
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 4.7
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 22 4.7
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 4.7
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 6.3
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 6.3
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 6.3
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 6.3
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 26.6 bits (56), Expect = 0.17
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +1
Query: 214 SVEFYGNDTPEFKGIKEGRMYLTTHRMIYN----SKKNTDAMRSFSFPFIALQDVTVEQP 381
S E ND + GIK+ ++Y M Y + D ++ F P + +QDVT++
Sbjct: 615 STEGVCNDAGSYCGIKD-KLYPDRRSMGYPFDRMPRNGVDTLQQFLTPNMRVQDVTIK-- 671
Query: 382 MFSANCIKGKVR 417
FS ++ K R
Sbjct: 672 -FSDRTVRPKQR 682
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.6 bits (46), Expect = 2.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 553 AKHQLPYDEKQDEQLLTWLV 494
AKH + YD+ +D L T L+
Sbjct: 569 AKHYVQYDQGEDRWLCTLLL 588
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.6 bits (46), Expect = 2.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 553 AKHQLPYDEKQDEQLLTWLV 494
AKH + YD+ +D L T L+
Sbjct: 802 AKHYVQYDQGEDRWLCTLLL 821
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.6 bits (46), Expect = 2.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 553 AKHQLPYDEKQDEQLLTWLV 494
AKH + YD+ +D L T L+
Sbjct: 802 AKHYVQYDQGEDRWLCTLLL 821
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 4.7
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = -2
Query: 426 RLGTNFTFYTVGREHRLFHSYILQCNKRKTE*SHGICI 313
R T++T Y + FH +R+ E +H +C+
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 4.7
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = -2
Query: 426 RLGTNFTFYTVGREHRLFHSYILQCNKRKTE*SHGICI 313
R T++T Y + FH +R+ E +H +C+
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 4.7
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = -2
Query: 426 RLGTNFTFYTVGREHRLFHSYILQCNKRKTE*SHGICI 313
R T++T Y + FH +R+ E +H +C+
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.8 bits (44), Expect = 4.7
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = -2
Query: 426 RLGTNFTFYTVGREHRLFHSYILQCNKRKTE*SHGICI 313
R T++T Y + FH +R+ E +H +C+
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.8 bits (44), Expect = 4.7
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = -2
Query: 426 RLGTNFTFYTVGREHRLFHSYILQCNKRKTE*SHGICI 313
R T++T Y + FH +R+ E +H +C+
Sbjct: 178 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 215
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 4.7
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = -2
Query: 426 RLGTNFTFYTVGREHRLFHSYILQCNKRKTE*SHGICI 313
R T++T Y + FH +R+ E +H +C+
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 21.8 bits (44), Expect = 4.7
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = -2
Query: 426 RLGTNFTFYTVGREHRLFHSYILQCNKRKTE*SHGICI 313
R T++T Y + FH +R+ E +H +C+
Sbjct: 10 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 47
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 4.7
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = -2
Query: 426 RLGTNFTFYTVGREHRLFHSYILQCNKRKTE*SHGICI 313
R T++T Y + FH +R+ E +H +C+
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 6.3
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 553 AKHQLPYDEKQDEQLLTWLV 494
A+H + YD+ +D L T L+
Sbjct: 829 ARHYVQYDQGEDRWLCTLLL 848
Score = 21.4 bits (43), Expect = 6.3
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -2
Query: 261 LDPLKLWCIIP 229
L P + WCI+P
Sbjct: 1021 LHPQEFWCIVP 1031
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 6.3
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 553 AKHQLPYDEKQDEQLLTWLV 494
A+H + YD+ +D L T L+
Sbjct: 829 ARHYVQYDQGEDRWLCTLLL 848
Score = 21.4 bits (43), Expect = 6.3
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -2
Query: 261 LDPLKLWCIIP 229
L P + WCI+P
Sbjct: 1021 LHPQEFWCIVP 1031
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.4 bits (43), Expect = 6.3
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 553 AKHQLPYDEKQDEQLLTWLV 494
A+H + YD+ +D L T L+
Sbjct: 829 ARHYVQYDQGEDRWLCTLLL 848
Score = 21.4 bits (43), Expect = 6.3
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -2
Query: 261 LDPLKLWCIIP 229
L P + WCI+P
Sbjct: 1021 LHPQEFWCIVP 1031
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.4 bits (43), Expect = 6.3
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 553 AKHQLPYDEKQDEQLLTWLV 494
A+H + YD+ +D L T L+
Sbjct: 829 ARHYVQYDQGEDRWLCTLLL 848
Score = 21.4 bits (43), Expect = 6.3
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -2
Query: 261 LDPLKLWCIIP 229
L P + WCI+P
Sbjct: 1021 LHPQEFWCIVP 1031
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,058
Number of Sequences: 336
Number of extensions: 2799
Number of successful extensions: 21
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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