Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19e01
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...   146   1e-37
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    24   1.3  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   5.1  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   5.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.1  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   6.7  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   6.7  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   8.9  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score =  146 bits (355), Expect = 1e-37
 Identities = 76/216 (35%), Positives = 123/216 (56%)
 Frame = +3

Query: 6   PIAVPPYRLNPSKKETMKNEIEKMLADDIIEECESAWCSPALMIPKSNGNVRFCVDYRRL 185
           P    PY +  + +  +   I++ML   +I+   S + SP  +  K +G VR C+D R +
Sbjct: 305 PFLKRPYPVPFALRPAVDATIQEMLDLGVIKREASPYASPMTVGKKKDGTVRICLDARMI 364

Query: 186 NEVTKSDTYPLPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPLGTYRF 365
           N    +D    P  D+LL+   +  YM+TIDLRSSYWQ+ +    R  TAF+    +Y +
Sbjct: 365 NSKMIADCESPPAADELLRRFHEIRYMSTIDLRSSYWQIPLSPESRQYTAFLYNGRSYTY 424

Query: 366 KRMPFGLKNAPATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLEAVFRRL 545
           + +PFGLK A  +F R +D +      +   V+ Y+DDLL+ SE   +HL+ L  VF +L
Sbjct: 425 QVLPFGLKTAVGSFSRAMDVVLGTEVRE--FVVNYIDDLLVASETLNEHLEHLRQVFEKL 482

Query: 546 SEFKLHVNREKCTFAKERVRYLGHVITPDGVSPDPE 653
            + ++ +N EK  F ++ V++LGH++T +G+  DPE
Sbjct: 483 KQARMTINLEKSNFIQKEVKFLGHILTINGIKADPE 518


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/20 (40%), Positives = 16/20 (80%)
 Frame = +3

Query: 372 MPFGLKNAPATFQRLIDRLR 431
           M FG+++AP+T + L++ L+
Sbjct: 101 MDFGVRSAPSTHEELLEVLK 120



 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 144 SNGNVRFCVDYRRLNEVTKSDTYPLPRI 227
           +NG    C  YR + ++ K   + LPR+
Sbjct: 202 ANGYAISCARYRFMPDIKKKGLHSLPRL 229


>EF468474-1|ABR25244.1|  516|Tribolium castaneum
          methoprene-tolerant protein.
          Length = 516

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3

Query: 18 PPYRLNPSKKETMKNEIEKMLADDI 92
          P   L PS    M+N  EKM  D +
Sbjct: 20 PEGSLLPSNSREMRNRAEKMRRDKL 44


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 6   PIAVPPYRLNPSKKETMKNEIEKM 77
           P+A+PP R  PS K +     EK+
Sbjct: 68  PVALPPKREIPSPKRSSPILAEKV 91


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +2

Query: 272 NRPSFFILASYGPRSRQRQNSFCLPPRHL 358
           N  ++F   +Y   +   +N F + P+HL
Sbjct: 566 NSSNYFANKTYDFHNMSFENDFIIQPKHL 594


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 582 TFAKERVRYLGHVITPDGV 638
           +F +ER   L H   PDGV
Sbjct: 87  SFLRERTITLTHCYDPDGV 105


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 470 SRRFVNYFRRIPATPTRPG 526
           S  F + F ++P TP +PG
Sbjct: 191 SLSFNDCFVKVPRTPDKPG 209


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 114 WCSPALMIPKSNGNVRFCVDYR 179
           W    L+IP  +  +R C D+R
Sbjct: 234 WSKSKLLIPVGHIPIRQCDDHR 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,624
Number of Sequences: 336
Number of extensions: 3037
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)