Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19e01
(653 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated po... 193 2e-49
AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein ... 189 2e-48
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 186 3e-47
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 178 6e-45
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 178 6e-45
AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein ... 176 2e-44
AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed... 176 2e-44
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 173 1e-43
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 170 1e-42
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 166 3e-41
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 159 2e-39
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 154 1e-37
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 151 8e-37
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 151 8e-37
X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 150 2e-36
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 150 2e-36
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 150 2e-36
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 150 2e-36
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ... 149 2e-36
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ... 149 2e-36
AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed... 147 1e-35
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 146 2e-35
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 146 2e-35
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc... 144 1e-34
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 143 2e-34
AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprot... 142 3e-34
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 139 3e-33
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 138 5e-33
AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p pro... 138 6e-33
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 131 9e-31
AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein ... 87 3e-17
AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed... 87 3e-17
AY094634-1|AAM10987.1| 484|Drosophila melanogaster AT04926p pro... 38 0.009
AE014296-519|AAF47695.2| 484|Drosophila melanogaster CG9970-PA ... 38 0.009
AE014298-652|AAF45966.2| 252|Drosophila melanogaster CG3062-PA ... 29 7.3
>AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated pol
protein protein.
Length = 407
Score = 193 bits (470), Expect = 2e-49
Identities = 91/220 (41%), Positives = 132/220 (60%), Gaps = 5/220 (2%)
Frame = +3
Query: 6 PIAVPPYRLNPSKKETMKNEIEKMLADDIIEECESAWCSPALMIPKSNGNV-----RFCV 170
PI YR K+ ++ +I KML +II+ S W +P ++PK + N+ R +
Sbjct: 184 PIHTKSYRYPFVHKDEVRKQISKMLEQNIIKNSHSPWSAPVWVVPKKSDNIGEKKWRLVI 243
Query: 171 DYRRLNEVTKSDTYPLPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPL 350
D+R+LNE T SD YP+P I D+L S K Y TTIDL S + Q+ + D KTAF
Sbjct: 244 DFRKLNEKTVSDRYPIPNIADILDSIGKTMYFTTIDLASGFHQIQMNPRDASKTAFTVEN 303
Query: 351 GTYRFKRMPFGLKNAPATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLEA 530
G Y F RMPFGLKNAPATFQR++D + L L YLDD+++ S Q+H+ D+++
Sbjct: 304 GHYEFTRMPFGLKNAPATFQRVMDNV--LGDLVGNVCLVYLDDIIVFSPSLQKHIADIKS 361
Query: 531 VFRRLSEFKLHVNREKCTFAKERVRYLGHVITPDGVSPDP 650
VF +L L + KC+F ++ + +LGH++T +GV P+P
Sbjct: 362 VFTKLQNANLKIQPSKCSFLRKEIDFLGHIVTQEGVKPNP 401
>AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein
protein.
Length = 849
Score = 189 bits (461), Expect = 2e-48
Identities = 92/221 (41%), Positives = 136/221 (61%), Gaps = 5/221 (2%)
Frame = +3
Query: 6 PIAVPPYRLNPSKKETMKNEIEKMLADDIIEECESAWCSPALMIPK---SNGN--VRFCV 170
P+ Y S ++ ++ +I++ML II E S +CSP ++PK ++G +R +
Sbjct: 169 PVYSKMYSFQQSYEQEVERQIQEMLEQGIIRESSSPYCSPIWVVPKKLDASGQQKLRIVI 228
Query: 171 DYRRLNEVTKSDTYPLPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPL 350
DYR+LNE+T +D YP+P ID++L ++ Y TTIDL + Q+ + KTAF
Sbjct: 229 DYRKLNEITINDRYPMPNIDEILGKLGRSNYFTTIDLAKGFHQIEMDSESIAKTAFSTKY 288
Query: 351 GTYRFKRMPFGLKNAPATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLEA 530
G Y + RMPFGLKNAPATFQR ++ L L + L YLDD+++ S ++HLQ LEA
Sbjct: 289 GHYEYTRMPFGLKNAPATFQRCMNNL--LRPLLNKNCLVYLDDIIVFSTSLEEHLQSLEA 346
Query: 531 VFRRLSEFKLHVNREKCTFAKERVRYLGHVITPDGVSPDPE 653
VF +LS+ L + +KC F ++ +LGHVIT DG+ P+PE
Sbjct: 347 VFEKLSQANLKLQLDKCEFLRQETTFLGHVITKDGIKPNPE 387
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 186 bits (452), Expect = 3e-47
Identities = 80/214 (37%), Positives = 138/214 (64%)
Frame = +3
Query: 6 PIAVPPYRLNPSKKETMKNEIEKMLADDIIEECESAWCSPALMIPKSNGNVRFCVDYRRL 185
P + P RL+ ++K+ ++ +++ L + I +S + SP +++ K G++R CVD+R+L
Sbjct: 716 PFSCSPRRLSYTEKDRLQKLLDEYLENGFIRPSDSEYASPIVLVKKKTGDLRMCVDFRKL 775
Query: 186 NEVTKSDTYPLPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPLGTYRF 365
N++T D YPLP IDDLL + T +DL++ ++ V V++ T+FV PLG Y +
Sbjct: 776 NKMTMKDNYPLPLIDDLLDRMNEKTVFTKLDLKNGFFHVHVKKESIKYTSFVTPLGQYEW 835
Query: 366 KRMPFGLKNAPATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLEAVFRRL 545
RMPFGLKNAP+ FQR ++++ +++ V+ Y+DD+L+ +E +HL+ L+ +F+RL
Sbjct: 836 LRMPFGLKNAPSVFQRFVNKI-FADMIRENKVVVYMDDILLATENINEHLETLKEIFKRL 894
Query: 546 SEFKLHVNREKCTFAKERVRYLGHVITPDGVSPD 647
E KL + +KC F + ++YLG +I DG+ P+
Sbjct: 895 VENKLELRIDKCEFMQSSIKYLGFIINKDGIMPN 928
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 178 bits (433), Expect = 6e-45
Identities = 91/220 (41%), Positives = 124/220 (56%), Gaps = 5/220 (2%)
Frame = +3
Query: 6 PIAVPPYRLNPSKKETMKNEIEKMLADDIIEECESAWCSPALMIPKS-----NGNVRFCV 170
PI YR K +K +IE ML II S W +P ++PK N R +
Sbjct: 316 PIHTKSYRYPFVHKTEVKKQIESMLDQQIIRSSHSPWSAPVWVVPKKLDGTGNRKWRLVI 375
Query: 171 DYRRLNEVTKSDTYPLPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPL 350
DYR+LN+ T SD YP+P I+D+L S K Y +T+DL S + Q+ + D KTAF
Sbjct: 376 DYRKLNDKTISDRYPIPNINDILDSIGKAKYFSTLDLTSGFHQIEMNPKDIAKTAFTVEG 435
Query: 351 GTYRFKRMPFGLKNAPATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLEA 530
G Y F RMPFGLKNAPATFQR++D + L L YLDD++I S Q+HL D++
Sbjct: 436 GHYEFTRMPFGLKNAPATFQRVMDSV--LGDLNGTICLFYLDDIIIFSPSLQKHLLDIKM 493
Query: 531 VFRRLSEFKLHVNREKCTFAKERVRYLGHVITPDGVSPDP 650
VF +L + K F ++ + +LGH++T DGV P+P
Sbjct: 494 VFEKLRAANFKLQPSKSEFLRKEIEFLGHIVTQDGVKPNP 533
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 178 bits (433), Expect = 6e-45
Identities = 90/222 (40%), Positives = 129/222 (58%), Gaps = 6/222 (2%)
Frame = +3
Query: 6 PIAVPPYRLNPSKKETMKNEIEKMLADDIIEECESAWCSPALMIPKS-----NGNVRFCV 170
P+ PY P ++N+I++ML II E S +CSP +++PK R +
Sbjct: 154 PVYRKPYGYAPGLDTEVENQIKEMLDQGIIRESNSPYCSPIVVVPKKPDISGQKKYRIAI 213
Query: 171 DYRRLNEVTKSDTYPLPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPL 350
DYR LNE+T +D YP+P +D++L Y TTIDL + Q+ + KTAF
Sbjct: 214 DYRYLNEITIADKYPIPNMDEILSKLGGCNYFTTIDLIKGFHQIEMDPESIPKTAFTTKT 273
Query: 351 GTYRFKRMPFGLKNAPATFQRLI-DRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLE 527
G Y + RMPFGLKNAPATFQR + D LR L + + YLDD+++ S ++HLQ L
Sbjct: 274 GHYEYTRMPFGLKNAPATFQRCMNDVLR---PLLNKICMVYLDDIIVFSASLEEHLQSLR 330
Query: 528 AVFRRLSEFKLHVNREKCTFAKERVRYLGHVITPDGVSPDPE 653
AVF+ LS L + +KC F K +LGH+++P+G+ P+PE
Sbjct: 331 AVFQALSNANLKLQLDKCEFLKHDTYFLGHMVSPEGIRPNPE 372
>AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein
protein.
Length = 1150
Score = 176 bits (429), Expect = 2e-44
Identities = 84/220 (38%), Positives = 133/220 (60%), Gaps = 5/220 (2%)
Frame = +3
Query: 6 PIAVPPYRLNPSKKETMKNEIEKMLADDIIEECESAWCSPALMIPK---SNGNVRF--CV 170
P+ PY+ S + + +I++M+ I+ + +S +CSP ++PK ++G +F V
Sbjct: 280 PVYRKPYKYPQSVDQEVNKQIKEMIEQGIVRKSKSPYCSPIWVVPKKADASGKQKFRLVV 339
Query: 171 DYRRLNEVTKSDTYPLPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPL 350
DYR LNE+T +D +P+PR+D++L + Y TTIDL + Q+ + E KTAF
Sbjct: 340 DYRNLNEITVNDKFPIPRMDEILDKLGRCQYFTTIDLAKGFHQIQMDENSIAKTAFSTKH 399
Query: 351 GTYRFKRMPFGLKNAPATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLEA 530
G Y + RMPFGLKNAPATFQR ++ L KD L YLDD+++ S ++H+ L+
Sbjct: 400 GHYEYTRMPFGLKNAPATFQRCMNNLLEDLIYKD--CLVYLDDIIVYSTPLEEHILSLKK 457
Query: 531 VFRRLSEFKLHVNREKCTFAKERVRYLGHVITPDGVSPDP 650
VF +L + L + +KC F K+ +LGH++T +G+ P+P
Sbjct: 458 VFEKLRDANLKLQLDKCEFMKKETEFLGHIVTTNGIKPNP 497
>AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1065
Score = 176 bits (428), Expect = 2e-44
Identities = 87/220 (39%), Positives = 130/220 (59%), Gaps = 5/220 (2%)
Frame = +3
Query: 6 PIAVPPYRLNPSKKETMKNEIEKMLADDIIEECESAWCSPALMIPK---SNGNVRF--CV 170
PI PY+ S E ++N+++ M+ II + S +CSP ++PK ++G +F +
Sbjct: 195 PIYRRPYKYPQSFDEEVENQMKDMIRQGIIRKSNSPYCSPVWVVPKKPDASGKSKFRIVI 254
Query: 171 DYRRLNEVTKSDTYPLPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPL 350
DYR LNE+T D YP+P +D++L Y TTIDL + Q+ + E KTAF
Sbjct: 255 DYRNLNEITVDDKYPIPVMDEILDKLGNCQYFTTIDLAKGFHQIQMDENSIAKTAFSTKN 314
Query: 351 GTYRFKRMPFGLKNAPATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLEA 530
G + + RMPFGLKNAPATFQR ++ L + K+ L YLDD+++ S ++H+ L
Sbjct: 315 GHFEYTRMPFGLKNAPATFQRCMNNLLADLIYKN--CLVYLDDIIVYSTSLEEHIMSLRK 372
Query: 531 VFRRLSEFKLHVNREKCTFAKERVRYLGHVITPDGVSPDP 650
VF +L E L + +KC F K+ +LGH+IT DG+ P+P
Sbjct: 373 VFLKLREANLKLQLDKCEFLKKETEFLGHIITTDGIKPNP 412
>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
Drosophila melanogastertransposable element 297. ).
Length = 1059
Score = 173 bits (422), Expect = 1e-43
Identities = 86/220 (39%), Positives = 130/220 (59%), Gaps = 5/220 (2%)
Frame = +3
Query: 6 PIAVPPYRLNPSKKETMKNEIEKMLADDIIEECESAWCSPALMIPK----SNGN-VRFCV 170
PI Y L + + ++N++++ML +I E S + SP ++PK S N R +
Sbjct: 206 PIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVI 265
Query: 171 DYRRLNEVTKSDTYPLPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPL 350
DYR+LNE+T D YP+P +D++L K Y TTIDL + Q+ + E KTAF
Sbjct: 266 DYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKS 325
Query: 351 GTYRFKRMPFGLKNAPATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLEA 530
G Y + RMPFGL+NAPATFQR ++ + L + L YLDD++I S +HL ++
Sbjct: 326 GHYEYLRMPFGLRNAPATFQRCMNNI--LRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQL 383
Query: 531 VFRRLSEFKLHVNREKCTFAKERVRYLGHVITPDGVSPDP 650
VF +L++ L + +KC F K+ +LGH++TPDG+ P+P
Sbjct: 384 VFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNP 423
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 170 bits (414), Expect = 1e-42
Identities = 90/220 (40%), Positives = 120/220 (54%), Gaps = 5/220 (2%)
Frame = +3
Query: 6 PIAVPPYRLNPSKKETMKNEIEKMLADDIIEECESAWCSPALMIPKS-----NGNVRFCV 170
PI YR KE +K +IE ML DII+ S W +P ++PK R +
Sbjct: 202 PIHTKSYRYPYIHKEEVKKQIEAMLNQDIIKSSYSPWSAPVWVVPKKITPTGEQKWRLVI 261
Query: 171 DYRRLNEVTKSDTYPLPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPL 350
DYR+LNE T SD YP+P I D+L K Y +T+DL S + Q+ + D KTAF
Sbjct: 262 DYRKLNEKTISDRYPIPNIADILDRLGKAKYFSTLDLASGFHQIEMNPDDTPKTAFTVEG 321
Query: 351 GTYRFKRMPFGLKNAPATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLEA 530
G Y F RMPFGLKNAPATFQR++D + L L YLDD++I S Q+H L+
Sbjct: 322 GHYEFIRMPFGLKNAPATFQRVMDNI--FGDLIGTICLVYLDDIIIFSTSLQEHFIHLKT 379
Query: 531 VFRRLSEFKLHVNREKCTFAKERVRYLGHVITPDGVSPDP 650
+F RL V K F + +LGH+++ +GV P+P
Sbjct: 380 IFGRLRSANFKVQLTKSYFLRRETEFLGHIVSQEGVRPNP 419
>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 1058
Score = 166 bits (403), Expect = 3e-41
Identities = 83/215 (38%), Positives = 128/215 (59%), Gaps = 5/215 (2%)
Frame = +3
Query: 24 YRLNPSKKETMKNEIEKMLADDIIEECESAWCSPALMIPK---SNGNVRF--CVDYRRLN 188
Y + ++ ++++I+ ML II S + SP ++PK ++G +F +DYR+LN
Sbjct: 213 YSYPQAYEQEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLN 272
Query: 189 EVTKSDTYPLPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPLGTYRFK 368
E+T D +P+P +D++L + Y TTIDL + Q+ + KTAF G Y +
Sbjct: 273 EITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYL 332
Query: 369 RMPFGLKNAPATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLEAVFRRLS 548
RMPFGLKNAPATFQR ++ + L + L YLDD+++ S +HLQ L VF +L+
Sbjct: 333 RMPFGLKNAPATFQRCMNDI--LRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLA 390
Query: 549 EFKLHVNREKCTFAKERVRYLGHVITPDGVSPDPE 653
+ L + +KC F K+ +LGHV+TPDG+ P+PE
Sbjct: 391 KANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPE 425
>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
Length = 1003
Score = 159 bits (387), Expect = 2e-39
Identities = 87/221 (39%), Positives = 126/221 (57%), Gaps = 5/221 (2%)
Frame = +3
Query: 6 PIAVPPYRLNPSKKETMKNEIEKMLADDIIEECESAWCSPALMIPKS---NGN--VRFCV 170
PI Y + + ++ +I+++L D II S + SP ++PK NG R V
Sbjct: 123 PIYAKSYPYPVNMRGEVERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVV 182
Query: 171 DYRRLNEVTKSDTYPLPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPL 350
D++RLN VT DTYP+P I+ L S Y TT+DL S + Q+ ++E+D KTAF
Sbjct: 183 DFKRLNTVTIPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLN 242
Query: 351 GTYRFKRMPFGLKNAPATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLEA 530
G Y F R+PFGLKNAPA FQR+ID + K Y+DD+++ SE + H ++L
Sbjct: 243 GKYEFLRLPFGLKNAPAIFQRMIDDILREHIGK--VCYVYIDDIIVFSEDYDTHWKNLRL 300
Query: 531 VFRRLSEFKLHVNREKCTFAKERVRYLGHVITPDGVSPDPE 653
V LS+ L VN EK F +V +LG+++T DG+ DP+
Sbjct: 301 VLASLSKANLQVNLEKSHFLDTQVEFLGYIVTADGIKADPK 341
>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
transcriptase-like polymeraseprotein.
Length = 1059
Score = 154 bits (373), Expect = 1e-37
Identities = 79/220 (35%), Positives = 128/220 (58%), Gaps = 5/220 (2%)
Frame = +3
Query: 6 PIAVPPYRLNPSKKETMKNEIEKMLADDIIEECESAWCSPALMIPK---SNGNVRF--CV 170
PI Y+ S K+ + +I ++L D II S + SP ++PK S+G ++ +
Sbjct: 195 PIYSKFYQYPMSLKDEVHKQISELLHDGIIRPSRSPYNSPVWIVPKKLDSSGKKKYRVVI 254
Query: 171 DYRRLNEVTKSDTYPLPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPL 350
DYR+LN VT +D YP+P I+++L N + +DL+S + Q++++E+D +KTAF
Sbjct: 255 DYRKLNMVTVADRYPIPDINEVLAQLGDNKIFSVLDLKSGFHQILLKESDIEKTAFSINN 314
Query: 351 GTYRFKRMPFGLKNAPATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLEA 530
G Y F R+PFGLKNAP+ FQR +D + K Y+DD++I S+ + H Q+L+
Sbjct: 315 GKYEFTRLPFGLKNAPSIFQRALDDILHEHIGK--ICFIYIDDIIIFSKDDETHYQNLDT 372
Query: 531 VFRRLSEFKLHVNREKCTFAKERVRYLGHVITPDGVSPDP 650
+FR L + + +KC F K +V +LG V++ G+ P
Sbjct: 373 IFRTLQQANMKCQLDKCEFMKRKVEFLGFVVSDKGIETSP 412
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 151 bits (366), Expect = 8e-37
Identities = 77/220 (35%), Positives = 127/220 (57%), Gaps = 6/220 (2%)
Frame = +3
Query: 6 PIAVPPYRLNPSKKETMKNEIEKMLADDIIEECESAWCSPALMIPKSNG------NVRFC 167
P+ YR S+ E ++ +++K++ D I+E S + SP L++PK + R
Sbjct: 314 PVYTKNYRSPHSQVEEIQAQVQKLIKDKIVEPSVSQYNSPLLLVPKKSSPNSDKKKWRLV 373
Query: 168 VDYRRLNEVTKSDTYPLPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCP 347
+DYR++N+ +D +PLPRIDD+L + Y + +DL S + Q+ + E RD T+F
Sbjct: 374 IDYRQINKKLLADKFPLPRIDDILDQLGRAKYFSCLDLMSGFHQIELDEGSRDITSFSTS 433
Query: 348 LGTYRFKRMPFGLKNAPATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLE 527
G+YRF R+PFGLK AP +FQR++ + + ++ Y+DDL++I + L++L
Sbjct: 434 NGSYRFTRLPFGLKIAPNSFQRMM--TIAFSGIEPSQAFLYMDDLIVIGCSEKHMLKNLT 491
Query: 528 AVFRRLSEFKLHVNREKCTFAKERVRYLGHVITPDGVSPD 647
VF + E+ L ++ EKC+F V +LGH T G+ PD
Sbjct: 492 EVFGKCREYNLKLHPEKCSFFMHEVTFLGHKCTDKGILPD 531
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
DNA polymerase protein.
Length = 1000
Score = 151 bits (366), Expect = 8e-37
Identities = 77/220 (35%), Positives = 127/220 (57%), Gaps = 6/220 (2%)
Frame = +3
Query: 6 PIAVPPYRLNPSKKETMKNEIEKMLADDIIEECESAWCSPALMIPKSNG------NVRFC 167
P+ YR S+ E ++ +++K++ D I+E S + SP L++PK + R
Sbjct: 77 PVYTKNYRSPHSQVEEIQAQVQKLIKDKIVEPSVSQYNSPLLLVPKKSSPNSDKKKWRLV 136
Query: 168 VDYRRLNEVTKSDTYPLPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCP 347
+DYR++N+ +D +PLPRIDD+L + Y + +DL S + Q+ + E RD T+F
Sbjct: 137 IDYRQINKKLLADKFPLPRIDDILDQLGRAKYFSCLDLMSGFHQIELDEGSRDITSFSTS 196
Query: 348 LGTYRFKRMPFGLKNAPATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLE 527
G+YRF R+PFGLK AP +FQR++ + + ++ Y+DDL++I + L++L
Sbjct: 197 NGSYRFTRLPFGLKIAPNSFQRMM--TIAFSGIEPSQAFLYMDDLIVIGCSEKHMLKNLT 254
Query: 528 AVFRRLSEFKLHVNREKCTFAKERVRYLGHVITPDGVSPD 647
VF + E+ L ++ EKC+F V +LGH T G+ PD
Sbjct: 255 EVFGKCREYNLKLHPEKCSFFMHEVTFLGHKCTDKGILPD 294
>X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D.
melanogaster retrotransposongypsy gene fragment for
reverse transcriptase-like enzyme.).
Length = 930
Score = 150 bits (363), Expect = 2e-36
Identities = 79/206 (38%), Positives = 120/206 (58%), Gaps = 6/206 (2%)
Frame = +3
Query: 54 MKNEIEKMLADDIIEECESAWCSPALMIPKS------NGNVRFCVDYRRLNEVTKSDTYP 215
+ NE++++L D II S + SP ++ K N N R +D+R+LNE T D YP
Sbjct: 177 VNNEVKQLLKDGIIRPSRSPYNSPTWVVDKKGTDASGNPNKRLVIDFRKLNEKTIPDRYP 236
Query: 216 LPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPLGTYRFKRMPFGLKNA 395
+P I +L + K + TT+DL+S Y Q+ + E DR+KT+F G Y F R+PFGL+NA
Sbjct: 237 MPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNA 296
Query: 396 PATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLEAVFRRLSEFKLHVNRE 575
+ FQR +D + K V Y+DD++I SE H++ ++ V + L + + V++E
Sbjct: 297 SSIFQRALDDVLREQIGKICYV--YVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQE 354
Query: 576 KCTFAKERVRYLGHVITPDGVSPDPE 653
K F KE V YLG +++ DG DPE
Sbjct: 355 KTRFFKESVEYLGFIVSKDGTKSDPE 380
>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
protein.
Length = 1010
Score = 150 bits (363), Expect = 2e-36
Identities = 79/206 (38%), Positives = 120/206 (58%), Gaps = 6/206 (2%)
Frame = +3
Query: 54 MKNEIEKMLADDIIEECESAWCSPALMIPKS------NGNVRFCVDYRRLNEVTKSDTYP 215
+ NE++++L D II S + SP ++ K N N R +D+R+LNE T D YP
Sbjct: 172 VNNEVKQLLKDGIIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLVIDFRKLNEKTIPDRYP 231
Query: 216 LPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPLGTYRFKRMPFGLKNA 395
+P I +L + K + TT+DL+S Y Q+ + E DR+KT+F G Y F R+PFGL+NA
Sbjct: 232 MPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNA 291
Query: 396 PATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLEAVFRRLSEFKLHVNRE 575
+ FQR +D + K V Y+DD++I SE H++ ++ V + L + + V++E
Sbjct: 292 SSIFQRALDDVLREQIGKICYV--YVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQE 349
Query: 576 KCTFAKERVRYLGHVITPDGVSPDPE 653
K F KE V YLG +++ DG DPE
Sbjct: 350 KTRFFKESVEYLGFIVSKDGTKSDPE 375
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 150 bits (363), Expect = 2e-36
Identities = 79/206 (38%), Positives = 120/206 (58%), Gaps = 6/206 (2%)
Frame = +3
Query: 54 MKNEIEKMLADDIIEECESAWCSPALMIPKS------NGNVRFCVDYRRLNEVTKSDTYP 215
+ NE++++L D II S + SP ++ K N N R +D+R+LNE T D YP
Sbjct: 207 VNNEVKQLLKDGIIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLVIDFRKLNEKTIPDRYP 266
Query: 216 LPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPLGTYRFKRMPFGLKNA 395
+P I +L + K + TT+DL+S Y Q+ + E DR+KT+F G Y F R+PFGL+NA
Sbjct: 267 MPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNA 326
Query: 396 PATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLEAVFRRLSEFKLHVNRE 575
+ FQR +D + K V Y+DD++I SE H++ ++ V + L + + V++E
Sbjct: 327 SSIFQRALDDVLREQIGKICYV--YVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQE 384
Query: 576 KCTFAKERVRYLGHVITPDGVSPDPE 653
K F KE V YLG +++ DG DPE
Sbjct: 385 KTRFFKESVEYLGFIVSKDGTKSDPE 410
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 150 bits (363), Expect = 2e-36
Identities = 79/206 (38%), Positives = 120/206 (58%), Gaps = 6/206 (2%)
Frame = +3
Query: 54 MKNEIEKMLADDIIEECESAWCSPALMIPKS------NGNVRFCVDYRRLNEVTKSDTYP 215
+ NE++++L D II S + SP ++ K N N R +D+R+LNE T D YP
Sbjct: 625 VNNEVKQLLKDGIIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLVIDFRKLNEKTIPDRYP 684
Query: 216 LPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPLGTYRFKRMPFGLKNA 395
+P I +L + K + TT+DL+S Y Q+ + E DR+KT+F G Y F R+PFGL+NA
Sbjct: 685 MPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNA 744
Query: 396 PATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLEAVFRRLSEFKLHVNRE 575
+ FQR +D + K V Y+DD++I SE H++ ++ V + L + + V++E
Sbjct: 745 SSIFQRALDDVLREQIGKICYV--YVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQE 802
Query: 576 KCTFAKERVRYLGHVITPDGVSPDPE 653
K F KE V YLG +++ DG DPE
Sbjct: 803 KTRFFKESVEYLGFIVSKDGTKSDPE 828
>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 149 bits (362), Expect = 2e-36
Identities = 79/206 (38%), Positives = 120/206 (58%), Gaps = 6/206 (2%)
Frame = +3
Query: 54 MKNEIEKMLADDIIEECESAWCSPALMIPKS------NGNVRFCVDYRRLNEVTKSDTYP 215
+ NE++++L D II S + SP ++ K N N R +D+R+LNE T D YP
Sbjct: 172 VNNEVKQLLKDGIIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLVIDFRKLNERTIPDRYP 231
Query: 216 LPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPLGTYRFKRMPFGLKNA 395
+P I +L + K + TT+DL+S Y Q+ + E DR+KT+F G Y F R+PFGL+NA
Sbjct: 232 MPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNA 291
Query: 396 PATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLEAVFRRLSEFKLHVNRE 575
+ FQR +D + K V Y+DD++I SE H++ ++ V + L + + V++E
Sbjct: 292 SSIFQRALDDVLREQIGKICYV--YVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQE 349
Query: 576 KCTFAKERVRYLGHVITPDGVSPDPE 653
K F KE V YLG +++ DG DPE
Sbjct: 350 KTRFFKESVEYLGFIVSKDGTKSDPE 375
>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 149 bits (362), Expect = 2e-36
Identities = 79/206 (38%), Positives = 120/206 (58%), Gaps = 6/206 (2%)
Frame = +3
Query: 54 MKNEIEKMLADDIIEECESAWCSPALMIPKS------NGNVRFCVDYRRLNEVTKSDTYP 215
+ NE++++L D II S + SP ++ K N N R +D+R+LNE T D YP
Sbjct: 172 VNNEVKQLLKDGIIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLVIDFRKLNERTIPDRYP 231
Query: 216 LPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPLGTYRFKRMPFGLKNA 395
+P I +L + K + TT+DL+S Y Q+ + E DR+KT+F G Y F R+PFGL+NA
Sbjct: 232 MPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNA 291
Query: 396 PATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLEAVFRRLSEFKLHVNRE 575
+ FQR +D + K V Y+DD++I SE H++ ++ V + L + + V++E
Sbjct: 292 SSIFQRALDDVLREQIGKICYV--YVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQE 349
Query: 576 KCTFAKERVRYLGHVITPDGVSPDPE 653
K F KE V YLG +++ DG DPE
Sbjct: 350 KTRFFKESVEYLGFIVSKDGTKSDPE 375
>AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1013
Score = 147 bits (356), Expect = 1e-35
Identities = 79/222 (35%), Positives = 127/222 (57%), Gaps = 6/222 (2%)
Frame = +3
Query: 6 PIAVPPYRLNPSKKETMKNEIEKMLADDIIEECESAWCSPALMIPKS------NGNVRFC 167
PI Y + + EI+++L + II++ +S + +P ++ K N +R
Sbjct: 158 PIYAKLYPYPMGAADFVNGEIQELLKNGIIQKSKSPYNNPIWVVDKKGTDDAGNKKMRLV 217
Query: 168 VDYRRLNEVTKSDTYPLPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCP 347
+D+R+LNE T D YP+P I +L + K Y TT+DL+S Y Q+ + E DR+KTAF
Sbjct: 218 LDFRKLNERTVPDRYPMPNISMILGNLGKAKYFTTLDLKSGYHQITLAERDREKTAFAVN 277
Query: 348 LGTYRFKRMPFGLKNAPATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLE 527
G Y F+R+PFGL+NA + FQR ID + K V Y+DD++I SE H++ ++
Sbjct: 278 GGKYEFRRLPFGLRNAASIFQRTIDDILREQIGKFCYV--YVDDVIIFSEDENDHVKHVD 335
Query: 528 AVFRRLSEFKLHVNREKCTFAKERVRYLGHVITPDGVSPDPE 653
V + L + + ++ EK F K+ V +LG ++T +G + DPE
Sbjct: 336 WVLKSLYDANMRISAEKSRFFKKSVSFLGFIVTNNGAATDPE 377
>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 146 bits (355), Expect = 2e-35
Identities = 78/206 (37%), Positives = 119/206 (57%), Gaps = 6/206 (2%)
Frame = +3
Query: 54 MKNEIEKMLADDIIEECESAWCSPALMIPKS------NGNVRFCVDYRRLNEVTKSDTYP 215
+ NE++++L D II S + SP ++ K N N R +D+R+LNE T D YP
Sbjct: 207 VNNEVKQLLKDGIIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLVIDFRKLNEKTIPDRYP 266
Query: 216 LPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPLGTYRFKRMPFGLKNA 395
+P I +L + K + TT+DL+S Y Q+ + E DR+KT+F G Y F R+PFGL+NA
Sbjct: 267 MPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNA 326
Query: 396 PATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLEAVFRRLSEFKLHVNRE 575
+ FQR +D + K V Y+DD++I SE H++ ++ V + L + + V++E
Sbjct: 327 SSIFQRALDDVLREQIGKICYV--YVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQE 384
Query: 576 KCTFAKERVRYLGHVITPDGVSPDPE 653
K F E V YLG +++ DG DPE
Sbjct: 385 KTRFFTESVEYLGFIVSKDGTISDPE 410
>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
protein.
Length = 1037
Score = 146 bits (355), Expect = 2e-35
Identities = 78/218 (35%), Positives = 119/218 (54%), Gaps = 5/218 (2%)
Frame = +3
Query: 6 PIAVPPYRLNPSKKETMKNEIEKMLADDIIEECESAWCSPALMIPK----SNGNV-RFCV 170
PI Y+ K+ + +I +ML II +S + SP ++ K SN R V
Sbjct: 132 PIYSKTYKYPEIHKDEVNRQIAEMLDQGIIRHSKSPYNSPLWVVQKKMDQSNKQKWRLVV 191
Query: 171 DYRRLNEVTKSDTYPLPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPL 350
DYR+LN+ T D +P+P ID++ +T+DL ++Q+ + D KTAF
Sbjct: 192 DYRKLNKETIEDRFPIPNIDEIFDKLGDCKIFSTLDLAKGFYQIEMDNKDVHKTAFSTTS 251
Query: 351 GTYRFKRMPFGLKNAPATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLEA 530
G Y F RMPFGL+NAP+TFQRL++ + S + Y+DD+LI S+ +H+ L
Sbjct: 252 GHYEFLRMPFGLRNAPSTFQRLMNNILS--PYTGQFCIVYMDDILIFSKNIGEHVNHLSC 309
Query: 531 VFRRLSEFKLHVNREKCTFAKERVRYLGHVITPDGVSP 644
+F LS+ L + +KC FA+E + +LGH I +G+ P
Sbjct: 310 IFSCLSKANLKLQSDKCEFAREEIEFLGHTINSEGLKP 347
>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
transcriptase polyprotein protein.
Length = 1041
Score = 144 bits (348), Expect = 1e-34
Identities = 81/216 (37%), Positives = 121/216 (56%), Gaps = 6/216 (2%)
Frame = +3
Query: 21 PYRLNPSKKETMKNEIEKMLADDIIEECESAWCSPALMIPKSN----GNV--RFCVDYRR 182
PY + S + + E +L D II S + +P ++ K GN R +D+R+
Sbjct: 194 PYPMGVS--DFVNKETHALLKDGIIRPSSSPYNNPVWVVDKKGTDEEGNTKKRLVIDFRK 251
Query: 183 LNEVTKSDTYPLPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPLGTYR 362
LN T D YP+P + +L + K + TT+DL+S++ Q+++ E DR KTAF G Y
Sbjct: 252 LNLKTIDDKYPIPNVVWILSNLGKARFFTTLDLKSAFHQILLAEKDRAKTAFSVGNGKYE 311
Query: 363 FKRMPFGLKNAPATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLEAVFRR 542
F R+PFGLKNAP+ FQR ID + K V Y+DD++I S G + H+ D+ V R
Sbjct: 312 FCRLPFGLKNAPSIFQRAIDDVVRDRIGKSCYV--YVDDVIIFSNGIEDHVNDVAWVLDR 369
Query: 543 LSEFKLHVNREKCTFAKERVRYLGHVITPDGVSPDP 650
LS + V++EK F KE V YLG +++ G++ P
Sbjct: 370 LSGANMRVSKEKSFFFKESVEYLGFMVSSGGITTSP 405
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 143 bits (347), Expect = 2e-34
Identities = 76/220 (34%), Positives = 124/220 (56%), Gaps = 6/220 (2%)
Frame = +3
Query: 6 PIAVPPYRLNPSKKETMKNEIEKMLADDIIEECESAWCSPALMIPK------SNGNVRFC 167
P+ + YR+ S+K + +++K++ D I+E S + SP L++PK + R
Sbjct: 69 PVYIKNYRMADSQKPEIARQVKKLIDDGIVEPSMSEYNSPLLLVPKKPLPNSTEKRWRLA 128
Query: 168 VDYRRLNEVTKSDTYPLPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCP 347
VDYR++N+ SD +PLPRI+D+L + Y + +DL S + Q+ + + RD T+F
Sbjct: 129 VDYRQINKKLLSDKFPLPRIEDILDQLGRAKYFSCLDLMSGFHQIELEKRYRDITSFSTA 188
Query: 348 LGTYRFKRMPFGLKNAPATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLE 527
G+YRF R+P+GLK AP +FQR + + + L+ Y+DDL++I + L++L
Sbjct: 189 NGSYRFTRLPYGLKVAPNSFQRRM--TLAFSGLEPSQAFLYMDDLVVIGCSEKHMLKNLT 246
Query: 528 AVFRRLSEFKLHVNREKCTFAKERVRYLGHVITPDGVSPD 647
VF L ++ KC+F + V YLGH T G+ PD
Sbjct: 247 NVFELCRRHNLKLHPGKCSFFMKEVTYLGHKCTDKGILPD 286
>AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprotein
protein.
Length = 437
Score = 142 bits (345), Expect = 3e-34
Identities = 77/220 (35%), Positives = 123/220 (55%), Gaps = 5/220 (2%)
Frame = +3
Query: 6 PIAVPPYRLNPSKKETMKNEIEKMLADDIIEECESAWCSPALMIPK---SNGNVRF--CV 170
PI Y+ S K+ + +I ++L D II S + SP ++PK S+G ++ +
Sbjct: 38 PIYSKFYQYPMSLKDEVHKQISELLHDGIIRPSRSPYNSPVWIVPKKLDSSGKKKYRVVI 97
Query: 171 DYRRLNEVTKSDTYPLPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPL 350
DYR+LN VT +D YP+P I+++L N + +DL+S + Q++++E+D +KTAF
Sbjct: 98 DYRKLNMVTVADRYPIPDINEVLAQLGDNKIFSVLDLKSGFHQILLKESDIEKTAFSINN 157
Query: 351 GTYRFKRMPFGLKNAPATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLEA 530
G Y F R+PFGLKNAP+ FQR +D S + V L S+ + H Q+L+
Sbjct: 158 GKYEFTRLPFGLKNAPSIFQRALDGY-SSRTYRVRYVSFILTTSSSFSKDDETHYQNLDT 216
Query: 531 VFRRLSEFKLHVNREKCTFAKERVRYLGHVITPDGVSPDP 650
+FR L + + +KC F K +V +LG V++ G+ P
Sbjct: 217 IFRTLQQANMKCQLDKCEFMKRKVEFLGFVVSDKGIETSP 256
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p
protein.
Length = 1026
Score = 139 bits (336), Expect = 3e-33
Identities = 64/209 (30%), Positives = 120/209 (57%)
Frame = +3
Query: 27 RLNPSKKETMKNEIEKMLADDIIEECESAWCSPALMIPKSNGNVRFCVDYRRLNEVTKSD 206
RL+ + +K ++E+ + I+ + S S +++ K +G +R CVDYR+LN + D
Sbjct: 189 RLSEEEAIAVKKQVEEWVEQSIVRKSTSNVASRIVVVKKKDGTLRVCVDYRKLNTMVLMD 248
Query: 207 TYPLPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPLGTYRFKRMPFGL 386
+P+P ++++L+ + + TT+DL++ ++ V V EA + TAFV G + F + PFG
Sbjct: 249 CFPVPIMEEVLEKLQSAKWFTTMDLQNGFFHVAVEEASKPYTAFVTREGLFEFNKAPFGF 308
Query: 387 KNAPATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLEAVFRRLSEFKLHV 566
KN+PA F R + + ++ L Y+DD+++ + ++ ++ E V +R +EF L +
Sbjct: 309 KNSPAAFIRFVQFIFQELINSNIMQL-YMDDIIVYAATPEECMEKTEMVLKRAAEFGLKI 367
Query: 567 NREKCTFAKERVRYLGHVITPDGVSPDPE 653
+KC F + R+ +LGH+I + P E
Sbjct: 368 KWKKCNFMQRRIHFLGHIIEGGQICPGKE 396
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 138 bits (335), Expect = 5e-33
Identities = 64/209 (30%), Positives = 120/209 (57%)
Frame = +3
Query: 27 RLNPSKKETMKNEIEKMLADDIIEECESAWCSPALMIPKSNGNVRFCVDYRRLNEVTKSD 206
RL+ + +K ++E+ + I+ + S S +++ K +G +R CVDYR+LN + D
Sbjct: 495 RLSEEEAIAVKKQVEEWVEQSIVRKSTSNVASRIVVVRKKDGTLRVCVDYRKLNTMVLMD 554
Query: 207 TYPLPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPLGTYRFKRMPFGL 386
+P+P ++++L+ + + TT+DL++ ++ V V EA + TAFV G + F + PFG
Sbjct: 555 CFPVPIMEEVLEKLQSAKWFTTMDLQNGFFHVAVEEASKPYTAFVTREGLFEFNKAPFGF 614
Query: 387 KNAPATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLEAVFRRLSEFKLHV 566
KN+PA F R + + ++ L Y+DD+++ + ++ ++ E V +R +EF L +
Sbjct: 615 KNSPAAFIRFVQFIFQELINSNIMQL-YMDDIIVYAATPEECMEKTEMVLKRAAEFGLKI 673
Query: 567 NREKCTFAKERVRYLGHVITPDGVSPDPE 653
+KC F + R+ +LGH+I + P E
Sbjct: 674 KWKKCNFMQRRIHFLGHIIEGGQICPGKE 702
>AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p
protein.
Length = 825
Score = 138 bits (334), Expect = 6e-33
Identities = 72/220 (32%), Positives = 121/220 (55%), Gaps = 6/220 (2%)
Frame = +3
Query: 6 PIAVPPYRLNPSKKETMKNEIEKMLADDIIEECESAWCSPALMIPKSN------GNVRFC 167
P + YR S++ + ++ K++ D I+E S + SP L++PK + R
Sbjct: 208 PSYIKNYRTPHSQQAEISRQVTKLIEDKIVEPAVSEYNSPLLLVPKKSLPDSKEKKWRLV 267
Query: 168 VDYRRLNEVTKSDTYPLPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCP 347
+DYR++N+ +D +PLPRIDD+L + Y + +DL S + Q+ + E R+ T+F
Sbjct: 268 IDYRQINKKLLADKFPLPRIDDILDQLGRAKYFSCLDLMSGFHQIELEEDSRNITSFSTS 327
Query: 348 LGTYRFKRMPFGLKNAPATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLE 527
G+YRF R+P+GLK AP +FQR++ + L+ Y+DDL++I + ++L
Sbjct: 328 SGSYRFTRLPYGLKIAPNSFQRMM--TMAFTGLEPSQAFLYMDDLIVIGCSEKHMTKNLT 385
Query: 528 AVFRRLSEFKLHVNREKCTFAKERVRYLGHVITPDGVSPD 647
VF + L ++ +KC+F V +LGH T G+ PD
Sbjct: 386 NVFELCRKNNLKLHPDKCSFFMSEVTFLGHKCTDKGILPD 425
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 131 bits (316), Expect = 9e-31
Identities = 69/209 (33%), Positives = 115/209 (55%)
Frame = +3
Query: 21 PYRLNPSKKETMKNEIEKMLADDIIEECESAWCSPALMIPKSNGNVRFCVDYRRLNEVTK 200
PYRL+P ++E ++ ++ +++ +I+ S + SP L++ K NG R CVD+R LN T
Sbjct: 462 PYRLSPEEREVVRMQVSELIRCNIVRPSCSPFASPMLLVKKKNGTDRLCVDFRELNSNTI 521
Query: 201 SDTYPLPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPLGTYRFKRMPF 380
SD YPLP I D + + Y T +D+ S + Q+ + + TAFV P
Sbjct: 522 SDKYPLPLISDQIARLRGANYFTCLDMASGFHQIPIHPESVEYTAFV-----------PD 570
Query: 381 GLKNAPATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLEAVFRRLSEFKL 560
GLKNAP+ FQR + + + L + V+ Y+DD++++S + L+ L+ V L++
Sbjct: 571 GLKNAPSVFQRTV--INALGDLANSFVIVYMDDIMVVSPTKELALERLKTVLNVLTKAGF 628
Query: 561 HVNREKCTFAKERVRYLGHVITPDGVSPD 647
N KC+F K V+YLG+ + + P+
Sbjct: 629 TFNLAKCSFLKTTVQYLGYEVRAGEIRPN 657
>AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein
protein.
Length = 826
Score = 86.6 bits (205), Expect = 3e-17
Identities = 45/121 (37%), Positives = 70/121 (57%)
Frame = +3
Query: 285 SSYWQVMVREADRDKTAFVCPLGTYRFKRMPFGLKNAPATFQRLIDRLRSCAALKDVTVL 464
S + Q+ + E R+ T+F G+YRF R+PFGLK AP +FQR++ S + L+
Sbjct: 2 SGFHQIELEENSRNITSFSTSNGSYRFTRLPFGLKIAPNSFQRMMTI--SFSGLEPSQAF 59
Query: 465 AYLDDLLIISEGFQQHLQDLEAVFRRLSEFKLHVNREKCTFAKERVRYLGHVITPDGVSP 644
Y+DDL++I + +++L VF ++ L ++ EKC+F V +LGH T GV P
Sbjct: 60 LYMDDLMVIGCSEKHMIKNLTDVFNVCRKYNLKLHPEKCSFFMHEVTFLGHKCTDKGVLP 119
Query: 645 D 647
D
Sbjct: 120 D 120
>AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 826
Score = 86.6 bits (205), Expect = 3e-17
Identities = 45/121 (37%), Positives = 70/121 (57%)
Frame = +3
Query: 285 SSYWQVMVREADRDKTAFVCPLGTYRFKRMPFGLKNAPATFQRLIDRLRSCAALKDVTVL 464
S + Q+ + E R+ T+F G+YRF R+PFGLK AP +FQR++ S + L+
Sbjct: 2 SGFHQIELEENSRNITSFSTSNGSYRFTRLPFGLKIAPNSFQRMMTI--SFSGLEPSQAF 59
Query: 465 AYLDDLLIISEGFQQHLQDLEAVFRRLSEFKLHVNREKCTFAKERVRYLGHVITPDGVSP 644
Y+DDL++I + +++L VF ++ L ++ EKC+F V +LGH T GV P
Sbjct: 60 LYMDDLMVIGCSEKHMIKNLTDVFNVCRKYNLKLHPEKCSFFMHEVTFLGHKCTDKGVLP 119
Query: 645 D 647
D
Sbjct: 120 D 120
>AY094634-1|AAM10987.1| 484|Drosophila melanogaster AT04926p
protein.
Length = 484
Score = 38.3 bits (85), Expect = 0.009
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +3
Query: 207 TYPLPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPLGTYRFKRMP 377
T LP D+L+ + + C++ L WQ++ E+ R+K AF+ LG +RMP
Sbjct: 203 TNKLPEFDELVPALQVACHLKVTLLEKEIWQILSDESVREKVAFLVYLGA---RRMP 256
>AE014296-519|AAF47695.2| 484|Drosophila melanogaster CG9970-PA
protein.
Length = 484
Score = 38.3 bits (85), Expect = 0.009
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +3
Query: 207 TYPLPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPLGTYRFKRMP 377
T LP D+L+ + + C++ L WQ++ E+ R+K AF+ LG +RMP
Sbjct: 203 TNKLPEFDELVPALQVACHLKVTLLEKEIWQILSDESVREKVAFLVYLGA---RRMP 256
>AE014298-652|AAF45966.2| 252|Drosophila melanogaster CG3062-PA
protein.
Length = 252
Score = 28.7 bits (61), Expect = 7.3
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Frame = +3
Query: 342 CPLGTYRFKRMPFGLKNAPATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQD 521
C G Y+F P L N QR + R+ A + +T L + DD + E Q +
Sbjct: 84 CLSGRYKFVDFPRDLCNC----QR--ENRRALACDQRLT-LGHKDDPYWMRERCQTKCEG 136
Query: 522 LEAVFRRLSEFKLHVNREKCTFAKER-VRYLGHVITPDGVSPD 647
L+ + R LSE NR KC E+ V+ I GV+ +
Sbjct: 137 LQKL-RALSERSARCNRAKCDVVSEKTVKMTPKAIKTTGVATE 178
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,743,704
Number of Sequences: 53049
Number of extensions: 607863
Number of successful extensions: 1565
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1520
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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