Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19d23
(416 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|R... 176 2e-43
UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110... 159 3e-38
UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4; Eukar... 155 3e-37
UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68; Euka... 147 9e-35
UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4; ... 144 6e-34
UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia ob... 127 1e-28
UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S riboso... 124 1e-27
UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n... 118 6e-26
UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=... 116 2e-25
UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkie... 116 3e-25
UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing prote... 112 2e-24
UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S riboso... 108 4e-23
UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6; T... 106 2e-22
UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2; ... 103 2e-21
UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillar... 101 8e-21
UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2; Apanspo... 95 4e-19
UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiell... 78 8e-14
UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin re... 65 6e-10
UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2; Thermoprot... 58 7e-08
UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n... 53 3e-06
UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5; Crenar... 53 3e-06
UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10; Thermoprot... 52 4e-06
UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 47 1e-04
UniRef50_Q74N49 Cluster: NEQ043; n=1; Nanoarchaeum equitans|Rep:... 34 1.4
UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1; Meth... 33 2.4
UniRef50_Q9Y5B8 Cluster: Nucleoside diphosphate kinase 7; n=13; ... 33 2.4
UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011; ... 33 3.1
UniRef50_A2S1H0 Cluster: Putative uncharacterized protein; n=5; ... 32 4.1
UniRef50_Q9BHL4 Cluster: Putative uncharacterized protein; n=3; ... 32 5.5
UniRef50_Q4N3J4 Cluster: Putative uncharacterized protein; n=1; ... 32 5.5
UniRef50_Q7RHF5 Cluster: Putative uncharacterized protein PY0403... 31 7.2
UniRef50_P36891 Cluster: Replication initiator protein; n=7; Str... 31 7.2
UniRef50_Q9ADC1 Cluster: Replication initiation protein; n=2; St... 31 9.6
UniRef50_A5GMY9 Cluster: Aldo/keto reductase family protein; n=2... 31 9.6
>UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|Rep:
Ribosomal protein S26 - Pectinaria gouldii (Trumpet
worm) (Ice-cream cone worm)
Length = 109
Score = 176 bits (428), Expect = 2e-43
Identities = 82/109 (75%), Positives = 92/109 (84%)
Frame = +1
Query: 31 MTRKRRNGGRAKHGCGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 210
MT+KRRN GR+K G GH + VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASVY
Sbjct: 1 MTKKRRNNGRSKKGRGHTRPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVYE 60
Query: 211 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRP 357
+ LPKLYAKLHYCVSCAIHSKVVRNRS++ R+ RTPP P M +P
Sbjct: 61 GYPLPKLYAKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFKPGAMRKP 109
>UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110;
Fungi/Metazoa group|Rep: 40S ribosomal protein S26-like
1 - Homo sapiens (Human)
Length = 115
Score = 159 bits (385), Expect = 3e-38
Identities = 72/98 (73%), Positives = 82/98 (83%)
Frame = +1
Query: 31 MTRKRRNGGRAKHGCGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 210
MT+KRRN AK G GHV+ +RCTNC RCVP DKAIKKFVIRNIVEAAAVRDI++ SV+
Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFD 60
Query: 211 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 324
+ LPKLY KLHYCVSCAIHSKVVRNRS++ + RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREACKDRTPP 98
>UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4;
Eukaryota|Rep: 40S ribosomal protein S26-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 155 bits (376), Expect = 3e-37
Identities = 70/113 (61%), Positives = 84/113 (74%)
Frame = +1
Query: 31 MTRKRRNGGRAKHGCGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 210
MT KRRNGGR KH GHV +RC+NC +C PKDKAIK+F++RNIVE AA+RD+ +ASVY
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 211 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQ 369
+ LPKLYAK YCVSCAIHS VVR RS+ +RR+RTPP R P+ Q
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKEDTPKPGQ 113
>UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68;
Eukaryota|Rep: 40S ribosomal protein S26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 119
Score = 147 bits (356), Expect = 9e-35
Identities = 64/99 (64%), Positives = 81/99 (81%)
Frame = +1
Query: 31 MTRKRRNGGRAKHGCGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 210
M +KR + GR K G GHVK VRC NC++ +PKDKAIK+ IRNIVEAAAVRD+++ASVYP
Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYP 60
Query: 211 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPK 327
+ LPK Y KLHYCVSCAIH+++VR RS++DR+ R PP+
Sbjct: 61 EYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQ 99
>UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S26 - Entamoeba histolytica HM-1:IMSS
Length = 147
Score = 144 bits (349), Expect = 6e-34
Identities = 68/113 (60%), Positives = 84/113 (74%)
Frame = +1
Query: 31 MTRKRRNGGRAKHGCGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 210
MT KRRN GR+K G GH + VRC++C RCVPKDKAIK++ I+NIVEAAAVRDI+D S
Sbjct: 1 MTSKRRNNGRSKKGRGHTQNVRCSHCGRCVPKDKAIKRYQIKNIVEAAAVRDISDNSALT 60
Query: 211 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQ 369
++LPK Y KL YCVSC IH +VVR RS+ DRR R PPK + ++ QAV+
Sbjct: 61 KYKLPKTYMKLEYCVSCGIHGRVVRVRSRTDRRNRLPPK-RVVKKTNKQQAVK 112
>UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia
obliqua|Rep: Ribosomal protein S26e - Lonomia obliqua
(Moth)
Length = 82
Score = 127 bits (306), Expect = 1e-28
Identities = 57/71 (80%), Positives = 64/71 (90%)
Frame = +1
Query: 160 IVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFP 339
+++ +RDIN+ASVY FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPK+ FP
Sbjct: 11 LLKLLPLRDINEASVYTSFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKNTFP 70
Query: 340 RDMSRPQAVQR 372
RDM+RPQ VQR
Sbjct: 71 RDMARPQNVQR 81
>UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S ribosomal
protein S26-2, partial; n=4; Pan troglodytes|Rep:
PREDICTED: similar to 40S ribosomal protein S26-2,
partial - Pan troglodytes
Length = 196
Score = 124 bits (298), Expect = 1e-27
Identities = 62/107 (57%), Positives = 76/107 (71%), Gaps = 2/107 (1%)
Frame = +1
Query: 46 RNGGRAKHGCGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLP 225
RN RAK G H++ +RCTN A+ VPKDKAIKKF+IRN+VEAAAVRDI++ASV+ + LP
Sbjct: 1 RNNNRAKKGHSHMQRIRCTNYAQRVPKDKAIKKFIIRNVVEAAAVRDISEASVFNAYVLP 60
Query: 226 K--LYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQ 360
K LY KL+YCV CAIH KVVRN K + +T P P + PQ
Sbjct: 61 KLYLYVKLNYCVRCAIHGKVVRNPPCKAHKDQTHPPRFRPSRSAAPQ 107
>UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n=2;
Rattus norvegicus|Rep: UPI00001CB188 UniRef100 entry -
Rattus norvegicus
Length = 107
Score = 118 bits (283), Expect = 6e-26
Identities = 56/87 (64%), Positives = 67/87 (77%)
Frame = +1
Query: 61 AKHGCGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 240
AK GCGHV+ V C + A C+PKDKAIK F+I+NI+EAAAVRDI+ A+V+ + LP LY K
Sbjct: 12 AKKGCGHVQPVPCRSSAWCLPKDKAIK-FIIQNILEAAAVRDIDKANVFKAYMLPMLYVK 70
Query: 241 LHYCVSCAIHSKVVRNRSKKDRRIRTP 321
LHYCVSCAIHS+VVRN K RR P
Sbjct: 71 LHYCVSCAIHSEVVRNHLLKLRRTEHP 97
>UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=1;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S26,
putative - Trichomonas vaginalis G3
Length = 118
Score = 116 bits (279), Expect = 2e-25
Identities = 51/97 (52%), Positives = 68/97 (70%)
Frame = +1
Query: 31 MTRKRRNGGRAKHGCGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 210
M KRRN GR+K GH + V C NC R VPKDKAI +F I+N+V+A++ +D++DA +Y
Sbjct: 1 MPVKRRNHGRSKMNRGHTRTVNCMNCGRQVPKDKAITRFAIKNMVDASSAKDVSDACIYQ 60
Query: 211 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 321
++LPK Y K +YCVSCA+H VVR R+ RR R P
Sbjct: 61 GYELPKTYQKQYYCVSCAVHRHVVRPRNVNVRRNRVP 97
>UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkiella
nova|Rep: 40S ribosomal protein S26 - Oxytricha nova
Length = 125
Score = 116 bits (278), Expect = 3e-25
Identities = 60/113 (53%), Positives = 73/113 (64%), Gaps = 2/113 (1%)
Frame = +1
Query: 31 MTRKRRNGGRAKHGCGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 210
M KRRN GR K GH VRCTNC R V KDKAIK+F RN+V+A++ RDI + Y
Sbjct: 1 MPSKRRNNGRNKKNKGHADTVRCTNCGRVVSKDKAIKRFQQRNMVDASSKRDIQENYAYA 60
Query: 211 M--FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQA 363
F +PK+Y KL YCVSCAIH+++VR RS +DRR R K R RP+A
Sbjct: 61 QSDFTMPKIYVKLSYCVSCAIHARIVRVRSVEDRRHRYTTKL---RQHVRPEA 110
>UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing protein;
n=12; Alveolata|Rep: Ribosomal protein S26e containing
protein - Tetrahymena thermophila SB210
Length = 197
Score = 112 bits (270), Expect = 2e-24
Identities = 52/103 (50%), Positives = 70/103 (67%), Gaps = 2/103 (1%)
Frame = +1
Query: 31 MTRKRRNGGRAKHGCGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 210
M KRRN GR++ GH + V CTNC R V KDKA+K++ +R++V+ ++ RDI +
Sbjct: 79 MPVKRRNAGRSQKNRGHTRTVPCTNCGRQVAKDKAVKRYTVRDMVDPSSKRDIQQKLAFE 138
Query: 211 MFQ--LPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSN 333
+ +PKLY KL YC+SCAIHS+VVR R +DRRIR PP N
Sbjct: 139 NEKQGIPKLYVKLQYCISCAIHSRVVRVRCAEDRRIRRPPIRN 181
>UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S ribosomal
protein S26 isoform 3; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 40S ribosomal protein S26 isoform
3 - Canis familiaris
Length = 118
Score = 108 bits (260), Expect = 4e-23
Identities = 49/59 (83%), Positives = 55/59 (93%)
Frame = +1
Query: 31 MTRKRRNGGRAKHGCGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVY 207
MT+KRRN GRAK G GHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVF 59
>UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein s26, putative -
Leishmania major
Length = 112
Score = 106 bits (255), Expect = 2e-22
Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 4/106 (3%)
Frame = +1
Query: 31 MTRKRRNGGRAK--HGCGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDAS- 201
MT KRRN GR+K H G VK + C NC R PKDKA+ +FV+R +++AA+ RD+ +AS
Sbjct: 1 MTTKRRNHGRSKPAHSRGRVKPIHCFNCGRLTPKDKAVGRFVVRRMLDAASARDVAEASP 60
Query: 202 VY-PMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNF 336
VY F +PKLY K +C++CAIHS+ VR R +R+IR K F
Sbjct: 61 VYGANFPMPKLYMKQRFCIACAIHSRTVRARPVGNRKIRYTKKVPF 106
>UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2;
Ostreococcus|Rep: Ribosomal protein S26, cytosolic -
Ostreococcus tauri
Length = 221
Score = 103 bits (246), Expect = 2e-21
Identities = 45/82 (54%), Positives = 63/82 (76%)
Frame = +1
Query: 82 VKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSC 261
VK V C + VPKDKA+++F++RNIVE+AA+RD+ ++ + + LPKLY K++Y +S
Sbjct: 127 VKRVFCESSGALVPKDKAVRRFMVRNIVESAAIRDLQESCAFESYTLPKLYRKVYYSISA 186
Query: 262 AIHSKVVRNRSKKDRRIRTPPK 327
AIHSKVVR RS++ RRIR PPK
Sbjct: 187 AIHSKVVRVRSREARRIRDPPK 208
>UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillardia
theta|Rep: 40S ribosomal protein S26 - Guillardia theta
(Cryptomonas phi)
Length = 98
Score = 101 bits (241), Expect = 8e-21
Identities = 44/95 (46%), Positives = 67/95 (70%)
Frame = +1
Query: 31 MTRKRRNGGRAKHGCGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 210
MT+KRRN GR+K G V+ + C + VPKDKAI ++VI+NIV+ +++RD+ D+ +Y
Sbjct: 1 MTKKRRNNGRSKKNRGLVRRIHCNLTGKLVPKDKAIVRYVIKNIVDLSSLRDLQDSCIYE 60
Query: 211 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIR 315
+ +PKLY K + + AIH+++VR RSK DR+ R
Sbjct: 61 YYTMPKLYYKNTFSIESAIHNRIVRVRSKADRKKR 95
>UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2;
Apansporoblastina|Rep: 40S RIBOSOMAL PROTEIN S26 -
Encephalitozoon cuniculi
Length = 105
Score = 95.5 bits (227), Expect = 4e-19
Identities = 40/91 (43%), Positives = 62/91 (68%)
Frame = +1
Query: 43 RRNGGRAKHGCGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQL 222
RRN GR K G +++C C PKDKAIK+F I++++E A+ D+ A++Y +F++
Sbjct: 2 RRNHGRGKKNRGSAGSIQCDKCGSVTPKDKAIKRFRIQSLIEQASFDDLKQATIYDVFEV 61
Query: 223 PKLYAKLHYCVSCAIHSKVVRNRSKKDRRIR 315
P++ K +CVSCA H+K+VR RS + R+IR
Sbjct: 62 PRMGYKSQFCVSCACHAKIVRVRSSQARKIR 92
>UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiella
natans|Rep: Ribosomal protein S26 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 98
Score = 77.8 bits (183), Expect = 8e-14
Identities = 36/94 (38%), Positives = 56/94 (59%)
Frame = +1
Query: 31 MTRKRRNGGRAKHGCGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 210
M +KRRN GR+K+ GHV + C + VP+DKAIKK ++++ ++D + V P
Sbjct: 1 MVKKRRNNGRSKNNRGHVNRIHCMSSNALVPRDKAIKKLNVKSLFFPNILKDTPNVFVLP 60
Query: 211 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRI 312
++ PKLY+ + Y +S A K ++ KK RRI
Sbjct: 61 GYKAPKLYSYVFYSISSAFSQKFIKPGRKKYRRI 94
>UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin
repeat domain protein 11 (Ankyrin repeat-containing
cofactor 1); n=1; Rattus norvegicus|Rep: PREDICTED:
similar to Ankyrin repeat domain protein 11 (Ankyrin
repeat-containing cofactor 1) - Rattus norvegicus
Length = 682
Score = 64.9 bits (151), Expect = 6e-10
Identities = 32/55 (58%), Positives = 39/55 (70%)
Frame = +1
Query: 79 HVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKL 243
+V+ + NC + +PKDKA KKFV RNIVEAAAVRDI +A+V LPK Y KL
Sbjct: 36 YVRPIGYMNCVQYMPKDKASKKFVTRNIVEAAAVRDIAEANVLDANVLPKFYIKL 90
>UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2;
Thermoprotei|Rep: Ribosomal protein S26E - Caldivirga
maquilingensis IC-167
Length = 152
Score = 58.0 bits (134), Expect = 7e-08
Identities = 31/108 (28%), Positives = 54/108 (50%)
Frame = +1
Query: 37 RKRRNGGRAKHGCGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 216
+KR+N GR K G V C NC + +P+ KA++ V + + +++
Sbjct: 7 KKRKNRGRHKGDKGKESIVYCDNCGKMIPRSKAVRVTVPYSPIPTDLAKELEKQGAI--- 63
Query: 217 QLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQ 360
+P+ Y YCV+CAI+ +++ RS+ +R+ + P R RPQ
Sbjct: 64 -VPRYYITKTYCVNCAIYLGIIKVRSEDERKSKKP----ILRGQQRPQ 106
>UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC1C52 UniRef100 entry -
Rattus norvegicus
Length = 70
Score = 52.8 bits (121), Expect = 3e-06
Identities = 39/84 (46%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Frame = +1
Query: 37 RKRRNGGRAKHGC--GHVKAVRCT-NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVY 207
R RR+ G+ K G G + V+ N C+ KDKA KFVI+NIVEAAA+R
Sbjct: 3 RMRRDEGKGKKGRSQGLLWPVKAAANFTGCMTKDKA-NKFVIQNIVEAAAIR-------- 53
Query: 208 PMFQLPKLYAKLHYCVSCAIHSKV 279
Y KLH CVSCAIH KV
Sbjct: 54 -------FYVKLHCCVSCAIHIKV 70
>UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5;
Crenarchaeota|Rep: 30S ribosomal protein S26e -
Aeropyrum pernix
Length = 95
Score = 52.8 bits (121), Expect = 3e-06
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +1
Query: 31 MTRKRRNGGRAKHGCGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI-NDASVY 207
M +KR + GR K G V+C NC R VP DKAI + + V+ ++ ++
Sbjct: 1 MPKKRESRGRRKGAKGKAGTVQCDNCGRVVPADKAICVTRMYSPVDPQLAEELEKKGAII 60
Query: 208 PMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRR 309
+ + K YCVSCA+H +V+ R ++ R+
Sbjct: 61 MRYPVTKC-----YCVSCAVHYGIVKIRPEEQRK 89
>UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10;
Thermoprotei|Rep: Ribosomal protein S26 - Pyrobaculum
aerophilum
Length = 98
Score = 52.4 bits (120), Expect = 4e-06
Identities = 25/97 (25%), Positives = 49/97 (50%)
Frame = +1
Query: 31 MTRKRRNGGRAKHGCGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 210
M +KR+N GR K G + C NC + +P+ KA++ V + V R++
Sbjct: 1 MPKKRKNRGRKKGDKGREPYLHCDNCGKIMPRSKAVRVTVPYSPVPPDLARELEKQGAI- 59
Query: 211 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 321
+ + YC++CA+ +++ RS+++R+ + P
Sbjct: 60 ---ISRYLVTKTYCINCAVFFGIIKVRSREERKKKIP 93
>UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 157
Score = 47.2 bits (107), Expect = 1e-04
Identities = 33/100 (33%), Positives = 48/100 (48%)
Frame = -3
Query: 330 TLGRSTDSSVFLRSVPDNFAVDGA*HAXXXXXXXXXXXEHWVYRGIVNISDRRRFYDVPN 151
+L RS+DSSV S +N +VD A + V RG ISD F DV +
Sbjct: 30 SLWRSSDSSVSSGSDSNNSSVDSARNTVVQLVVGLWKSIFSVDRGFRQISDSSSFNDVSD 89
Query: 150 HELFDSLVLWHAPRAVCASHSFNVTTSMLGASSITALTSH 31
D LVLW+ V S +VT+++L ++ ++L H
Sbjct: 90 SHSLDGLVLWNRSGTVDTSDRLDVTSTLLVSTVGSSLLWH 129
>UniRef50_Q74N49 Cluster: NEQ043; n=1; Nanoarchaeum equitans|Rep:
NEQ043 - Nanoarchaeum equitans
Length = 84
Score = 33.9 bits (74), Expect = 1.4
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +1
Query: 85 KAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCA 264
K VRC C R +PK+KA + N+ ++++ V +F + K++ C SCA
Sbjct: 11 KTVRCYYCGRILPKEKAYVIYTKPNV-----AGELSENEVIAVFSQKR---KIYVCPSCA 62
Query: 265 IHSKVVRNRSK 297
H + +R +
Sbjct: 63 RHRGIKDHRKE 73
>UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1;
Methanopyrus kandleri|Rep: Zn-ribbon containing protein
- Methanopyrus kandleri
Length = 87
Score = 33.1 bits (72), Expect = 2.4
Identities = 23/80 (28%), Positives = 34/80 (42%)
Frame = +1
Query: 25 RNMTRKRRNGGRAKHGCGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASV 204
RN RK R+G + G V C C VP+ KAI I + + ++D V
Sbjct: 3 RNPRRKGRDGWKQSKSRGKPSFVTCECCGGKVPRHKAIPWTQGFRITDPVVRQAVDDRYV 62
Query: 205 YPMFQLPKLYAKLHYCVSCA 264
+ + K++YC CA
Sbjct: 63 HTFSR------KVYYCPKCA 76
>UniRef50_Q9Y5B8 Cluster: Nucleoside diphosphate kinase 7; n=13;
Eutheria|Rep: Nucleoside diphosphate kinase 7 - Homo
sapiens (Human)
Length = 376
Score = 33.1 bits (72), Expect = 2.4
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 70 GCGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDIN-DASVYPMFQLPKLYAKLH 246
GCG + TNC C+ K A+ + ++ I+ A+RD + S MF + ++ +
Sbjct: 227 GCGPANTAKFTNCTCCIVKPHAVSEGLLGKIL--MAIRDAGFEISAMQMFNMDRVNVEEF 284
Query: 247 Y 249
Y
Sbjct: 285 Y 285
>UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 53.t00011 - Entamoeba histolytica HM-1:IMSS
Length = 586
Score = 32.7 bits (71), Expect = 3.1
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +1
Query: 94 RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 240
R N ++C+PKDK++ ++V N ++ +RDI +VY + + KL K
Sbjct: 170 RGINESKCIPKDKSLNEYVENNPIK-FTIRDI--VTVYSISDIKKLMMK 215
>UniRef50_A2S1H0 Cluster: Putative uncharacterized protein; n=5;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia mallei (strain NCTC 10229)
Length = 99
Score = 32.3 bits (70), Expect = 4.1
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +1
Query: 37 RKRRNGGRAKH--GCGHVKAVRCTNCARCVPKDK 132
R+ R G RA+H GCGHV +R T+ PK K
Sbjct: 45 RRHRIGERARHAAGCGHVTRLRRTHAVPTQPKPK 78
>UniRef50_Q9BHL4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 430
Score = 31.9 bits (69), Expect = 5.5
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +1
Query: 67 HGCGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQL-PKLYAKL 243
H H+K ++C NC+ +K+++ +IR+ E A ++ A +L P K
Sbjct: 194 HMALHLKEIQCDNCSLVFQSEKSLQSHIIRHHQEDADELEVWKAPCSICKELFPSTSVKT 253
Query: 244 HYCVSCAIHSKVV-RNRSKKDRRIRTPPKS 330
H C K++ + R K ++++ P S
Sbjct: 254 HEWY-CKNREKIIEKQRVSKILKVQSLPSS 282
>UniRef50_Q4N3J4 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 3588
Score = 31.9 bits (69), Expect = 5.5
Identities = 22/78 (28%), Positives = 35/78 (44%)
Frame = +1
Query: 67 HGCGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLH 246
+G + VR TN RC+ K +K NI+ + + S M+ LP+
Sbjct: 2245 NGSEGLSEVRVTN--RCIMCGKLVK-----NIISTENKEEQDGTSEVVMYSLPQTTGVWA 2297
Query: 247 YCVSCAIHSKVVRNRSKK 300
CV+C +SK + N K+
Sbjct: 2298 LCVACEAYSKYLENLCKE 2315
>UniRef50_Q7RHF5 Cluster: Putative uncharacterized protein PY04032;
n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY04032 - Plasmodium yoelii yoelii
Length = 1508
Score = 31.5 bits (68), Expect = 7.2
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Frame = +1
Query: 118 VPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAI-HSKVVRNRS 294
V K + +K I+ I+ A+ +IND + MF + + CV+ I H+ + RN +
Sbjct: 589 VEKKRCEQKLDIKKIINNDALTNINDLEIRKMFDSSEYNTEKINCVTGDICHTTMFRNNN 648
Query: 295 -----KKDRRIRT 318
KKD++I++
Sbjct: 649 SNHEEKKDKKIKS 661
>UniRef50_P36891 Cluster: Replication initiator protein; n=7;
Streptomyces|Rep: Replication initiator protein -
Streptomyces ambofaciens
Length = 459
Score = 31.5 bits (68), Expect = 7.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 10 TGSEVRNMTRKRRNGGRAKHGCGHVKAVRCTNCA 111
TG + + T GGR + CG+ +A RC +CA
Sbjct: 53 TGETLHHYTTAVEPGGRLRLACGNRRASRCPSCA 86
>UniRef50_Q9ADC1 Cluster: Replication initiation protein; n=2;
Streptomyces|Rep: Replication initiation protein -
Streptomyces coelicolor
Length = 454
Score = 31.1 bits (67), Expect = 9.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 10 TGSEVRNMTRKRRNGGRAKHGCGHVKAVRCTNCA 111
TG+ + + T GGR + CG+ +A RC CA
Sbjct: 53 TGATLHHYTTADEPGGRLRLACGNRRASRCPACA 86
>UniRef50_A5GMY9 Cluster: Aldo/keto reductase family protein; n=21;
Cyanobacteria|Rep: Aldo/keto reductase family protein -
Synechococcus sp. (strain WH7803)
Length = 385
Score = 31.1 bits (67), Expect = 9.6
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 4 LFTGSEVRNMTRKRRNG-GRAKHGCGHVKAVRCTNCARCVPK 126
L G ++R +R N GRA H VKA C +C C+P+
Sbjct: 316 LTLGHDLREFAEERYNLIGRAGHWWETVKADACAHCGDCLPR 357
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 373,821,186
Number of Sequences: 1657284
Number of extensions: 6506213
Number of successful extensions: 17397
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 16922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17384
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19465676618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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