Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19d17
(736 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC065295-1|AAH65295.1| 208|Homo sapiens CCDC25 protein protein. 221 2e-57
BC049197-1|AAH49197.2| 208|Homo sapiens coiled-coil domain cont... 221 2e-57
AK027900-1|BAB55442.1| 208|Homo sapiens protein ( Homo sapiens ... 221 2e-57
BC054039-1|AAH54039.1| 177|Homo sapiens CCDC25 protein protein. 196 5e-50
BC032588-1|AAH32588.1| 140|Homo sapiens CCDC25 protein protein. 123 6e-28
AK001715-1|BAA91857.1| 140|Homo sapiens protein ( Homo sapiens ... 123 6e-28
BC006239-1|AAH06239.1| 105|Homo sapiens CCDC25 protein protein. 99 1e-20
BC110391-1|AAI10392.1| 42|Homo sapiens CCDC25 protein protein. 60 8e-09
>BC065295-1|AAH65295.1| 208|Homo sapiens CCDC25 protein protein.
Length = 208
Score = 221 bits (540), Expect = 2e-57
Identities = 111/208 (53%), Positives = 132/208 (63%), Gaps = 1/208 (0%)
Frame = +1
Query: 55 MVFYFTSSVV-CPPVTLFMGADKNENEDLIKWGWPEDVWFHVDKVSSAHVYLRLTPGQTI 231
MVFYFTSS V T++MG DK ENEDLIK GWPED+WFHVDK+SSAHVYLRL G+ I
Sbjct: 1 MVFYFTSSSVNSSAYTIYMGKDKYENEDLIKHGWPEDIWFHVDKLSSAHVYLRLHKGENI 60
Query: 232 DDIPNLVLDDACQLVKANSILGNKMNDIDIVYTMWSNLKKTAGMEVGQVAFHKDREVRKA 411
+DIP VL D LVKANSI G KMN++++VYT WSNLKKTA M+VGQ+ FH+ ++V+
Sbjct: 61 EDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIV 120
Query: 412 KVAKRNNEIVNRLNKTKTESFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 591
V K+ NEI+NRL KTK E FP
Sbjct: 121 TVEKKVNEILNRLEKTKVERFPDLAAEKECRDREERNEKKAQIQEMKKREKEEMKKKREM 180
Query: 592 XXXXSYSTLMKAENMSTNYDGNDSDDFM 675
SYS+LMK ENMS+N DGNDSD+FM
Sbjct: 181 DELRSYSSLMKVENMSSNQDGNDSDEFM 208
>BC049197-1|AAH49197.2| 208|Homo sapiens coiled-coil domain
containing 25 protein.
Length = 208
Score = 221 bits (540), Expect = 2e-57
Identities = 111/208 (53%), Positives = 132/208 (63%), Gaps = 1/208 (0%)
Frame = +1
Query: 55 MVFYFTSSVV-CPPVTLFMGADKNENEDLIKWGWPEDVWFHVDKVSSAHVYLRLTPGQTI 231
MVFYFTSS V T++MG DK ENEDLIK GWPED+WFHVDK+SSAHVYLRL G+ I
Sbjct: 1 MVFYFTSSSVNSSAYTIYMGKDKYENEDLIKHGWPEDIWFHVDKLSSAHVYLRLHKGENI 60
Query: 232 DDIPNLVLDDACQLVKANSILGNKMNDIDIVYTMWSNLKKTAGMEVGQVAFHKDREVRKA 411
+DIP VL D LVKANSI G KMN++++VYT WSNLKKTA M+VGQ+ FH+ ++V+
Sbjct: 61 EDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIV 120
Query: 412 KVAKRNNEIVNRLNKTKTESFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 591
V K+ NEI+NRL KTK E FP
Sbjct: 121 TVEKKVNEILNRLEKTKVERFPDLAAEKECRDREERNEKKAQIQEMKKREKEEMKKKREM 180
Query: 592 XXXXSYSTLMKAENMSTNYDGNDSDDFM 675
SYS+LMK ENMS+N DGNDSD+FM
Sbjct: 181 DELRSYSSLMKVENMSSNQDGNDSDEFM 208
>AK027900-1|BAB55442.1| 208|Homo sapiens protein ( Homo sapiens
cDNA FLJ14994 fis, clone Y79AA1002125. ).
Length = 208
Score = 221 bits (540), Expect = 2e-57
Identities = 111/208 (53%), Positives = 132/208 (63%), Gaps = 1/208 (0%)
Frame = +1
Query: 55 MVFYFTSSVV-CPPVTLFMGADKNENEDLIKWGWPEDVWFHVDKVSSAHVYLRLTPGQTI 231
MVFYFTSS V T++MG DK ENEDLIK GWPED+WFHVDK+SSAHVYLRL G+ I
Sbjct: 1 MVFYFTSSSVNSSAYTIYMGKDKYENEDLIKHGWPEDIWFHVDKLSSAHVYLRLHKGENI 60
Query: 232 DDIPNLVLDDACQLVKANSILGNKMNDIDIVYTMWSNLKKTAGMEVGQVAFHKDREVRKA 411
+DIP VL D LVKANSI G KMN++++VYT WSNLKKTA M+VGQ+ FH+ ++V+
Sbjct: 61 EDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIV 120
Query: 412 KVAKRNNEIVNRLNKTKTESFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 591
V K+ NEI+NRL KTK E FP
Sbjct: 121 TVEKKVNEILNRLEKTKVERFPDLAAEKECRDREERNEKKAQIQEMKKREKEEMKKKREM 180
Query: 592 XXXXSYSTLMKAENMSTNYDGNDSDDFM 675
SYS+LMK ENMS+N DGNDSD+FM
Sbjct: 181 DELRSYSSLMKVENMSSNQDGNDSDEFM 208
>BC054039-1|AAH54039.1| 177|Homo sapiens CCDC25 protein protein.
Length = 177
Score = 196 bits (479), Expect = 5e-50
Identities = 92/142 (64%), Positives = 110/142 (77%), Gaps = 1/142 (0%)
Frame = +1
Query: 55 MVFYFTSSVV-CPPVTLFMGADKNENEDLIKWGWPEDVWFHVDKVSSAHVYLRLTPGQTI 231
MVFYFTSS V T++MG DK ENEDLIK GWPED+WFHVDK+SSAHVYLRL G+ I
Sbjct: 1 MVFYFTSSSVNSSAYTIYMGKDKYENEDLIKHGWPEDIWFHVDKLSSAHVYLRLHKGENI 60
Query: 232 DDIPNLVLDDACQLVKANSILGNKMNDIDIVYTMWSNLKKTAGMEVGQVAFHKDREVRKA 411
+DIP VL D LVKANSI G KMN++++VYT WSNLKKTA M+VGQ+ FH+ ++V+
Sbjct: 61 EDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIV 120
Query: 412 KVAKRNNEIVNRLNKTKTESFP 477
V K+ NEI+NRL KTK E FP
Sbjct: 121 TVEKKVNEILNRLEKTKVERFP 142
>BC032588-1|AAH32588.1| 140|Homo sapiens CCDC25 protein protein.
Length = 140
Score = 123 bits (297), Expect = 6e-28
Identities = 63/139 (45%), Positives = 78/139 (56%)
Frame = +1
Query: 259 DACQLVKANSILGNKMNDIDIVYTMWSNLKKTAGMEVGQVAFHKDREVRKAKVAKRNNEI 438
D LVKANSI G KMN++++VYT WSNLKKTA M+VGQ+ FH+ ++V+ V K+ NEI
Sbjct: 2 DCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEI 61
Query: 439 VNRLNKTKTESFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYSTL 618
+NRL KTK E FP SYS+L
Sbjct: 62 LNRLEKTKVERFPDLAAEKECRDREERNEKKAQIQEMKKREKEEMKKKREMDELRSYSSL 121
Query: 619 MKAENMSTNYDGNDSDDFM 675
MK ENMS+N DGNDSD+FM
Sbjct: 122 MKVENMSSNQDGNDSDEFM 140
>AK001715-1|BAA91857.1| 140|Homo sapiens protein ( Homo sapiens
cDNA FLJ10853 fis, clone NT2RP4001502. ).
Length = 140
Score = 123 bits (297), Expect = 6e-28
Identities = 63/139 (45%), Positives = 78/139 (56%)
Frame = +1
Query: 259 DACQLVKANSILGNKMNDIDIVYTMWSNLKKTAGMEVGQVAFHKDREVRKAKVAKRNNEI 438
D LVKANSI G KMN++++VYT WSNLKKTA M+VGQ+ FH+ ++V+ V K+ NEI
Sbjct: 2 DCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEI 61
Query: 439 VNRLNKTKTESFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYSTL 618
+NRL KTK E FP SYS+L
Sbjct: 62 LNRLEKTKVERFPDLAAEKECRDREERNEKKAQIQEMKKREKEEMKKKREMDELRSYSSL 121
Query: 619 MKAENMSTNYDGNDSDDFM 675
MK ENMS+N DGNDSD+FM
Sbjct: 122 MKVENMSSNQDGNDSDEFM 140
>BC006239-1|AAH06239.1| 105|Homo sapiens CCDC25 protein protein.
Length = 105
Score = 99.1 bits (236), Expect = 1e-20
Identities = 44/73 (60%), Positives = 56/73 (76%)
Frame = +1
Query: 259 DACQLVKANSILGNKMNDIDIVYTMWSNLKKTAGMEVGQVAFHKDREVRKAKVAKRNNEI 438
D LVKANSI G KMN++++VYT WSNLKKTA M+VGQ+ FH+ ++V+ V K+ NEI
Sbjct: 2 DCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEI 61
Query: 439 VNRLNKTKTESFP 477
+NRL KTK E FP
Sbjct: 62 LNRLEKTKVERFP 74
>BC110391-1|AAI10392.1| 42|Homo sapiens CCDC25 protein protein.
Length = 42
Score = 60.1 bits (139), Expect = 8e-09
Identities = 27/39 (69%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Frame = +1
Query: 55 MVFYFTSSVV-CPPVTLFMGADKNENEDLIKWGWPEDVW 168
MVFYFTSS V T++MG DK ENEDLIK GWPED+W
Sbjct: 1 MVFYFTSSSVNSSAYTIYMGKDKYENEDLIKHGWPEDIW 39
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,435,550
Number of Sequences: 237096
Number of extensions: 1734944
Number of successful extensions: 6978
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6972
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -