Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19d17
         (736 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-993|AAF46235.1|  209|Drosophila melanogaster CG4593-PA ...   231   1e-60
AY071614-1|AAL49236.1|  209|Drosophila melanogaster RE66240p pro...   229   3e-60
AY061461-1|AAL29009.1| 1430|Drosophila melanogaster LD41803p pro...    29   5.0  
AE014297-3525|AAF56280.2| 1430|Drosophila melanogaster CG5728-PA...    29   5.0  

>AE014298-993|AAF46235.1|  209|Drosophila melanogaster CG4593-PA
           protein.
          Length = 209

 Score =  231 bits (564), Expect = 1e-60
 Identities = 115/209 (55%), Positives = 137/209 (65%), Gaps = 2/209 (0%)
 Frame = +1

Query: 55  MVFYFTSSVVCPPVTLFMGADKNENEDLIKWGWPEDVWFHVDKVSSAHVYLRLTPGQTID 234
           MVFYF S+VV PP  L+MG DK+ENE+LI+WGWPEDVWFHV  +SSAHVYLRL  GQTID
Sbjct: 1   MVFYFKSNVVQPPAMLYMGRDKHENEELIRWGWPEDVWFHVHDLSSAHVYLRLRKGQTID 60

Query: 235 DIPNLVLDDACQLVKANSILGNKMNDIDIVYTMWSNLKKTAGMEVGQVAFHKDREVRKAK 414
           DIP  VL DA QL KANSI GNK+N++++VYTMW NLKKT  ME GQVA+H ++ VR+ +
Sbjct: 61  DIPTDVLVDAAQLCKANSIQGNKVNNLEVVYTMWENLKKTPDMEPGQVAYHNEKAVRRIR 120

Query: 415 VAKRNNEIVNRLNKTKT-ESFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 591
           + KR NEIVNRLN+TKT E  P                                      
Sbjct: 121 LEKRINEIVNRLNRTKTEEEHPDFRGLREARDAAERQDQKKIQRERREQEKEAAKQRELE 180

Query: 592 XXXXSYSTLMKAENMSTNYD-GNDSDDFM 675
               SY++L K+ENM TNYD GN+SDDFM
Sbjct: 181 AELRSYASLQKSENMRTNYDAGNESDDFM 209


>AY071614-1|AAL49236.1|  209|Drosophila melanogaster RE66240p
           protein.
          Length = 209

 Score =  229 bits (560), Expect = 3e-60
 Identities = 114/209 (54%), Positives = 136/209 (65%), Gaps = 2/209 (0%)
 Frame = +1

Query: 55  MVFYFTSSVVCPPVTLFMGADKNENEDLIKWGWPEDVWFHVDKVSSAHVYLRLTPGQTID 234
           MVFYF  +VV PP  L+MG DK+ENE+LI+WGWPEDVWFHV  +SSAHVYLRL  GQTID
Sbjct: 1   MVFYFKGNVVQPPAMLYMGRDKHENEELIRWGWPEDVWFHVHDLSSAHVYLRLRKGQTID 60

Query: 235 DIPNLVLDDACQLVKANSILGNKMNDIDIVYTMWSNLKKTAGMEVGQVAFHKDREVRKAK 414
           DIP  VL DA QL KANSI GNK+N++++VYTMW NLKKT  ME GQVA+H ++ VR+ +
Sbjct: 61  DIPTDVLVDAAQLCKANSIQGNKVNNLEVVYTMWENLKKTPDMEPGQVAYHNEKAVRRIR 120

Query: 415 VAKRNNEIVNRLNKTKT-ESFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 591
           + KR NEIVNRLN+TKT E  P                                      
Sbjct: 121 LEKRINEIVNRLNRTKTEEEHPDFRGLREARDAAERQDQKKIQRERREQEKEAAKQRELE 180

Query: 592 XXXXSYSTLMKAENMSTNYD-GNDSDDFM 675
               SY++L K+ENM TNYD GN+SDDFM
Sbjct: 181 AELRSYASLQKSENMRTNYDAGNESDDFM 209


>AY061461-1|AAL29009.1| 1430|Drosophila melanogaster LD41803p protein.
          Length = 1430

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = +1

Query: 316  DIVYTMWSNLKKTAGMEVGQVAFHKDREVRKAKVAKRNNEIVNRLNKTKTES 471
            + V+ +W  +K+TAG EV  V   K +     K  K   E  +   K K ++
Sbjct: 968  ETVWRLWRGVKRTAGTEVAPVKAKKAKVEESPKQKKTTIEETSAQKKVKAKA 1019


>AE014297-3525|AAF56280.2| 1430|Drosophila melanogaster CG5728-PA
            protein.
          Length = 1430

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = +1

Query: 316  DIVYTMWSNLKKTAGMEVGQVAFHKDREVRKAKVAKRNNEIVNRLNKTKTES 471
            + V+ +W  +K+TAG EV  V   K +     K  K   E  +   K K ++
Sbjct: 968  ETVWRLWRGVKRTAGTEVAPVKAKKAKVEESPKQKKTTIEETSAQKKVKAKA 1019


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,509,447
Number of Sequences: 53049
Number of extensions: 496885
Number of successful extensions: 1019
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)