Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19d16
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   4.1  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   5.4  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.2  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.2  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   9.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.5  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = -1

Query: 275 RLLMESPASIILTASSKVQLPIFKRRIAVTSRSMHDISFTYDSDRYS*T 129
           R L ESP  I L    +V+L   +R +     S    S   D DR+S T
Sbjct: 2   RFLGESPNGIYLYHDGRVKLLEGRRVVDCDDVSSVSQSEAGDEDRFSFT 50


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 488 PFLMKCSKRPKIICKQPN 435
           PF + C+ RPK+   QP+
Sbjct: 87  PFNIDCTSRPKLQEPQPS 104


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 356 TTASICSNTLRTLSSMPVVSPVLNQWERLLMESP 255
           T+ SIC   +   +   V   +L + E +L E P
Sbjct: 303 TSVSICYTLMLLANHREVQEEILKEMEAVLDEEP 336


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 356 TTASICSNTLRTLSSMPVVSPVLNQWERLLMESP 255
           T+ SIC   +   +   V   +L + E +L E P
Sbjct: 303 TSVSICYTLMLLANHREVQEEILKEMEAVLDEEP 336


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 616 PRLSEAVKKFIRLSKSDYDDRL 681
           P+L+  VK+ I    S+ D+RL
Sbjct: 56  PKLNAEVKRAITQQHSERDERL 77


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +1

Query: 238 VKMIDAGDSIKSLSHWFSTGETTGIDDN 321
           +K +  G ++  +S    TG+ T +D N
Sbjct: 346 IKPVLGGTALPDISEIIPTGDDTTMDSN 373


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +1

Query: 238 VKMIDAGDSIKSLSHWFSTGETTGIDDN 321
           +K +  G ++  +S    TG+ T +D N
Sbjct: 346 IKPVLGGTALPDISEIIPTGDDTTMDSN 373


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +1

Query: 238 VKMIDAGDSIKSLSHWFSTGETTGIDDN 321
           +K +  G ++  +S    TG+ T +D N
Sbjct: 346 IKPVLGGTALPDISEIIPTGDDTTMDSN 373


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +1

Query: 238 VKMIDAGDSIKSLSHWFSTGETTGIDDN 321
           +K +  G ++  +S    TG+ T +D N
Sbjct: 346 IKPVLGGTALPDISEIIPTGDDTTMDSN 373


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,096
Number of Sequences: 336
Number of extensions: 3396
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)