Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19d15
(299 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 124 9e-30
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 124 9e-30
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 124 9e-30
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 124 9e-30
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 124 9e-30
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 91 1e-19
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 71 2e-13
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 60 3e-10
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 60 3e-10
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 55 8e-09
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 54 2e-08
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 45 1e-05
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 45 1e-05
Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical pr... 42 8e-05
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 39 6e-04
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 37 0.002
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 35 0.009
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 34 0.016
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 34 0.022
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 33 0.038
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 27 1.9
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 27 3.3
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 27 3.3
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 27 3.3
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 26 4.4
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 26 4.4
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 26 4.4
Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z70306-3|CAA94325.1| 318|Caenorhabditis elegans Hypothetical pr... 26 5.8
AL161712-22|CAO82055.1| 158|Caenorhabditis elegans Hypothetical... 25 7.6
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 124 bits (300), Expect = 9e-30
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 124 bits (300), Expect = 9e-30
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 124 bits (300), Expect = 9e-30
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 124 bits (300), Expect = 9e-30
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 124 bits (300), Expect = 9e-30
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 124 bits (300), Expect = 9e-30
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 122 bits (294), Expect = 5e-29
Identities = 56/76 (73%), Positives = 66/76 (86%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTL GKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
Score = 72.5 bits (170), Expect = 5e-14
Identities = 33/47 (70%), Positives = 39/47 (82%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAG 158
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAG
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 124 bits (300), Expect = 9e-30
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 124 bits (300), Expect = 9e-30
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 124 bits (300), Expect = 9e-30
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 124 bits (300), Expect = 9e-30
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 124 bits (300), Expect = 9e-30
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 124 bits (300), Expect = 9e-30
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532
Score = 124 bits (300), Expect = 9e-30
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608
Score = 124 bits (300), Expect = 9e-30
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 669 IQKESTLHLVLRLRGG 684
Score = 124 bits (300), Expect = 9e-30
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 745 IQKESTLHLVLRLRGG 760
Score = 124 bits (300), Expect = 9e-30
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 821 IQKESTLHLVLRLRGG 836
Score = 122 bits (294), Expect = 5e-29
Identities = 56/76 (73%), Positives = 66/76 (86%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTL GKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 124 bits (300), Expect = 9e-30
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 124 bits (300), Expect = 9e-30
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 124 bits (300), Expect = 9e-30
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 124 bits (300), Expect = 9e-30
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 124 bits (300), Expect = 9e-30
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 124 bits (300), Expect = 9e-30
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
Score = 124 bits (300), Expect = 9e-30
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532
Score = 124 bits (300), Expect = 9e-30
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608
Score = 124 bits (300), Expect = 9e-30
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 669 IQKESTLHLVLRLRGG 684
Score = 124 bits (300), Expect = 9e-30
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 745 IQKESTLHLVLRLRGG 760
Score = 123 bits (297), Expect = 2e-29
Identities = 56/76 (73%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 198 IQKESTLHMVLRLRGG 245
IQK+STLH+VLRLRGG
Sbjct: 821 IQKQSTLHLVLRLRGG 836
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 124 bits (300), Expect = 9e-30
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 91.5 bits (217), Expect = 1e-19
Identities = 43/77 (55%), Positives = 54/77 (70%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
M I KTLTGK I + EP + V +K+K+ +KEG+P QQRLIFAGKQ+ D KT ADY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 198 IQKESTLHMVLRLRGGY 248
+ S LH+VL LRGG+
Sbjct: 61 VLGGSVLHLVLALRGGF 77
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 70.9 bits (166), Expect = 2e-13
Identities = 35/75 (46%), Positives = 47/75 (62%)
Frame = +3
Query: 15 KMQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADY 194
K+ + KTL GKTI + +TV LK K+ +K GVP DQQRLIF QLE+ + + Y
Sbjct: 160 KLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAY 219
Query: 195 NIQKESTLHMVLRLR 239
NI+ E +H+V R R
Sbjct: 220 NIRDEDIIHLVSRHR 234
Score = 35.5 bits (78), Expect = 0.007
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +3
Query: 39 LTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 218
+TG IT E A + DL K+A+ + P ++ +D +T++DYNI+ STL
Sbjct: 98 VTGDPITVEASDA--IKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151
Query: 219 HM 224
+
Sbjct: 152 RL 153
Score = 27.5 bits (58), Expect = 1.9
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 6 NSVKMQIFXKTLTGKTITAETEPAETVADLKQKIADKEGV 125
+S M + KT TGKTIT E ++K ++ DK+GV
Sbjct: 55 DSKTMLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 60.1 bits (139), Expect = 3e-10
Identities = 33/74 (44%), Positives = 46/74 (62%)
Frame = +3
Query: 24 IFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQ 203
+F KTL +T+ E E V +KQKI EG+P ++QRL +AG+QLEDS D I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLEDS----DCGID 56
Query: 204 KESTLHMVLRLRGG 245
E+T+++ L L GG
Sbjct: 57 SEATIYVNLELLGG 70
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 60.1 bits (139), Expect = 3e-10
Identities = 33/74 (44%), Positives = 46/74 (62%)
Frame = +3
Query: 24 IFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQ 203
+F KTL +T+ E E V +KQKI EG+P ++QRL +AG+QLEDS D I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLEDS----DCGID 56
Query: 204 KESTLHMVLRLRGG 245
E+T+++ L L GG
Sbjct: 57 SEATIYVNLELLGG 70
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 55.2 bits (127), Expect = 8e-09
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVP 128
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 54.0 bits (124), Expect = 2e-08
Identities = 29/73 (39%), Positives = 41/73 (56%)
Frame = +3
Query: 15 KMQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADY 194
+ QIF K L G + + +TV D+K I + +P L F+GK+LED ++ DY
Sbjct: 153 EFQIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDY 211
Query: 195 NIQKESTLHMVLR 233
NIQK ST+ M R
Sbjct: 212 NIQKSSTITMYFR 224
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 44.8 bits (101), Expect = 1e-05
Identities = 19/69 (27%), Positives = 42/69 (60%)
Frame = +3
Query: 39 LTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 218
+ G + + +++LKQ+I D+ G+PV +Q+L+ G ++D+ + A YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 219 HMVLRLRGG 245
++ ++ RGG
Sbjct: 644 YLQVKERGG 652
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 44.8 bits (101), Expect = 1e-05
Identities = 19/69 (27%), Positives = 42/69 (60%)
Frame = +3
Query: 39 LTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 218
+ G + + +++LKQ+I D+ G+PV +Q+L+ G ++D+ + A YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 219 HMVLRLRGG 245
++ ++ RGG
Sbjct: 644 YLQVKERGG 652
>Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical
protein F56F3.4 protein.
Length = 341
Score = 41.9 bits (94), Expect = 8e-05
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +3
Query: 48 KTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLED-SKTMADYNIQKESTLHM 224
K I E + ETV+ LK +I + V ++Q L+F G +L+D +KTM D I ++ + M
Sbjct: 32 KQIVVEMKDKETVSILKNRIEQETEVLTNRQVLLFKGMELKDNNKTMTDCGINSDAKITM 91
Query: 225 VLRLRGG 245
+++ G
Sbjct: 92 NVKMSTG 98
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 39.1 bits (87), Expect = 6e-04
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +3
Query: 24 IFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGK 161
+F KTL +T+ E E V +KQKI EG+P ++QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 37.1 bits (82), Expect = 0.002
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +3
Query: 75 AETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 218
++T+ +K I V + R++ K LED T+A YNIQ+ STL
Sbjct: 192 SDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTL 239
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 35.1 bits (77), Expect = 0.009
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +3
Query: 75 AETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLR 239
++T+ +K +I V + R++ GK LED ++A YNIQ+ + + + L+
Sbjct: 215 SDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 34.3 bits (75), Expect = 0.016
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 36 TLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADY 194
++ G+ + E+V LK KI + G+P + L GK L D K +ADY
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY 201
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 33.9 bits (74), Expect = 0.022
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEG--VPVDQQRLIFAGKQLEDSKTMAD 191
+ + +TLT E +T+A++K +A ++G + Q+LI+ GK L+DS + +
Sbjct: 52 LSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDDSVKVGE 111
Query: 192 YNIQKESTLHMVLRLR 239
+ ++L R
Sbjct: 112 VGFDSSKFVVVMLSKR 127
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 33.1 bits (72), Expect = 0.038
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 75 AETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 218
++T+ +K +I G+ R K LED T+A YNI++ ST+
Sbjct: 181 SDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 27.5 bits (58), Expect = 1.9
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 36 TLTGKTITAETEPAETVADLKQKIADKEGVPV 131
TL G+TI P E +A K+ EG+P+
Sbjct: 281 TLDGRTIFYRVLPGEVIAHADVKVIHNEGMPM 312
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 33 KTLTGKTITAETEPAETVADLKQKIADKEGVP 128
+ L G + A T+P + V D +++ KEGVP
Sbjct: 812 QVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVP 843
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 26.6 bits (56), Expect = 3.3
Identities = 8/32 (25%), Positives = 21/32 (65%)
Frame = +3
Query: 129 VDQQRLIFAGKQLEDSKTMADYNIQKESTLHM 224
V+ L + G++L+D++++ YNI + +++
Sbjct: 124 VESFNLYYGGQKLQDNRSIGSYNIDQSREIYL 155
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 33 KTLTGKTITAETEPAETVADLKQKIADKEGVP 128
+ L G + A T+P + V D +++ KEGVP
Sbjct: 812 QVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVP 843
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein
363, isoform b protein.
Length = 2692
Score = 26.2 bits (55), Expect = 4.4
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 33 KTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFA 155
+TLTG I ++EP A K + E P + QR++ A
Sbjct: 544 QTLTGSLIPPKSEPIGRPASPKAILQKAETDPKELQRIVLA 584
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein
363, isoform a protein.
Length = 2695
Score = 26.2 bits (55), Expect = 4.4
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 33 KTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFA 155
+TLTG I ++EP A K + E P + QR++ A
Sbjct: 544 QTLTGSLIPPKSEPIGRPASPKAILQKAETDPKELQRIVLA 584
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 26.2 bits (55), Expect = 4.4
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQ-LEDSKTMADY 194
M + KT TGKTIT E + +K ++ K+GV AG Q +E T+ D
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDV 55
Query: 195 NIQK 206
IQ+
Sbjct: 56 KIQE 59
>Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical
protein C35A5.4 protein.
Length = 427
Score = 25.8 bits (54), Expect = 5.8
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +1
Query: 22 KYSSKH*RAKPLPPKRNPQRRWPISSKKLPIKKVCP*INKD 144
K SK P PK+N Q + S KLP K P KD
Sbjct: 348 KTVSKALSHSPKSPKKNSQEKSAPPSPKLPPKTTAPTPTKD 388
>Z70306-3|CAA94325.1| 318|Caenorhabditis elegans Hypothetical
protein C06G8.4 protein.
Length = 318
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -1
Query: 110 GNFLLEIGHRLCGFRFGGNGFARQCFXEYLHFYT 9
G +L + + C G GF F YLHF+T
Sbjct: 70 GKSMLYVSYGYCSLL--GEGFCFNIFAAYLHFHT 101
>AL161712-22|CAO82055.1| 158|Caenorhabditis elegans Hypothetical
protein Y66D12A.16a protein.
Length = 158
Score = 25.4 bits (53), Expect = 7.6
Identities = 15/55 (27%), Positives = 23/55 (41%)
Frame = +2
Query: 47 QNHYRRNGTRRDGGRSQAKNXXXXXXXXXSTKTYLCGQTIGRFQNYGRLQYSKGI 211
+ H+RRN TRRD A S +T C + F+ +Q+ K +
Sbjct: 90 KEHHRRNETRRDYRSISAVETVHETIKIESRRTVACEGNV-YFEETNVIQFPKNL 143
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,176,374
Number of Sequences: 27780
Number of extensions: 113637
Number of successful extensions: 369
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 369
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 313072342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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