Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19d15
(299 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 126 2e-30
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 126 2e-30
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 126 2e-30
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 126 2e-30
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 126 2e-30
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 125 5e-30
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 125 5e-30
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 125 5e-30
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 125 5e-30
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 125 5e-30
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 125 5e-30
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 125 5e-30
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 125 5e-30
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 125 5e-30
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 125 5e-30
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 125 5e-30
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 125 5e-30
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 125 5e-30
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 125 5e-30
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 125 5e-30
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 125 5e-30
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 124 8e-30
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 114 1e-26
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 99 5e-22
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 79 5e-16
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 67 2e-12
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 64 2e-11
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 59 5e-10
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 54 2e-08
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 54 2e-08
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 51 1e-07
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 51 1e-07
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 49 7e-07
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 48 9e-07
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 48 1e-06
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 46 4e-06
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 46 6e-06
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 46 6e-06
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 46 6e-06
At5g57860.3 68418.m07237 ubiquitin family protein contains Pfam ... 45 8e-06
At5g57860.2 68418.m07236 ubiquitin family protein contains Pfam ... 45 8e-06
At5g57860.1 68418.m07235 ubiquitin family protein contains Pfam ... 45 8e-06
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 45 8e-06
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 45 8e-06
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 44 1e-05
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 44 3e-05
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 42 8e-05
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 42 1e-04
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 42 1e-04
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 42 1e-04
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 40 4e-04
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 38 0.001
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 38 0.002
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 37 0.002
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 33 0.027
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 33 0.035
At3g01050.1 68416.m00006 expressed protein 33 0.035
At5g12280.1 68418.m01444 hypothetical protein 32 0.062
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 32 0.082
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 32 0.082
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 30 0.25
At2g35360.1 68415.m04335 ubiquitin family protein contains INTER... 30 0.33
At2g32360.1 68415.m03955 ubiquitin family protein contains INTER... 29 0.76
At4g05240.1 68417.m00791 ubiquitin family protein contains INTER... 28 1.0
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 27 1.8
At5g63420.1 68418.m07962 metallo-beta-lactamase family protein 27 2.3
At2g31960.1 68415.m03905 glycosyl transferase family 48 protein ... 27 2.3
At3g17080.1 68416.m02179 self-incompatibility protein-related si... 26 5.4
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 26 5.4
At1g80260.1 68414.m09396 tubulin family protein 25 7.1
At5g54060.1 68418.m06723 glycosyltransferase family protein cont... 25 9.4
At3g57890.1 68416.m06453 tubulin-specific chaperone C-related co... 25 9.4
At3g44110.1 68416.m04727 DNAJ heat shock protein, putative (J3) ... 25 9.4
At2g25480.1 68415.m03051 expressed protein 25 9.4
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 126 bits (305), Expect = 2e-30
Identities = 58/77 (75%), Positives = 68/77 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 198 IQKESTLHMVLRLRGGY 248
IQKESTLH+VLRLRGG+
Sbjct: 213 IQKESTLHLVLRLRGGF 229
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 126 bits (305), Expect = 2e-30
Identities = 58/77 (75%), Positives = 68/77 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 198 IQKESTLHMVLRLRGGY 248
IQKESTLH+VLRLRGG+
Sbjct: 289 IQKESTLHLVLRLRGGF 305
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 126 bits (305), Expect = 2e-30
Identities = 58/77 (75%), Positives = 68/77 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 198 IQKESTLHMVLRLRGGY 248
IQKESTLH+VLRLRGG+
Sbjct: 213 IQKESTLHLVLRLRGGF 229
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 126 bits (305), Expect = 2e-30
Identities = 58/77 (75%), Positives = 68/77 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 198 IQKESTLHMVLRLRGGY 248
IQKESTLH+VLRLRGG+
Sbjct: 289 IQKESTLHLVLRLRGGF 305
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 126 bits (305), Expect = 2e-30
Identities = 59/76 (77%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ +LK KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 119 bits (287), Expect = 3e-28
Identities = 56/76 (73%), Positives = 65/76 (85%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+ DQQRLIFAGKQ ED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYN 212
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 109 bits (262), Expect = 3e-25
Identities = 49/76 (64%), Positives = 62/76 (81%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKT E E ++T+ ++K KI D EG+P DQ RLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 198 IQKESTLHMVLRLRGG 245
+Q++STLH++LR RGG
Sbjct: 61 VQEDSTLHLLLRFRGG 76
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 48.4 bits (110), Expect = 9e-07
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKE 119
MQIF KTLTGKTIT E E ++T+ ++K KI DKE
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
Score = 28.7 bits (61), Expect = 0.76
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 181 LWPITIFKRNLLFTW 225
LWP T +R+LLFTW
Sbjct: 283 LWPTTTSRRSLLFTW 297
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 48.4 bits (110), Expect = 9e-07
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKE 119
MQIF KTLTGKTIT E E ++T+ ++K KI DKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 28.7 bits (61), Expect = 0.76
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 181 LWPITIFKRNLLFTW 225
LWP T +R+LLFTW
Sbjct: 435 LWPTTTSRRSLLFTW 449
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 48.4 bits (110), Expect = 9e-07
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKE 119
MQIF KTLTGKTIT E E ++T+ ++K KI DKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 28.7 bits (61), Expect = 0.76
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 181 LWPITIFKRNLLFTW 225
LWP T +R+LLFTW
Sbjct: 359 LWPTTTSRRSLLFTW 373
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 48.4 bits (110), Expect = 9e-07
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKE 119
MQIF KTLTGKTIT E E ++T+ ++K KI DKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 28.7 bits (61), Expect = 0.76
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 181 LWPITIFKRNLLFTW 225
LWP T +R+LLFTW
Sbjct: 435 LWPTTTSRRSLLFTW 449
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 48.4 bits (110), Expect = 9e-07
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKE 119
MQIF KTLTGKTIT E E ++T+ ++K KI DKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 28.7 bits (61), Expect = 0.76
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 181 LWPITIFKRNLLFTW 225
LWP T +R+LLFTW
Sbjct: 359 LWPTTTSRRSLLFTW 373
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 87.8 bits (208), Expect = 1e-18
Identities = 40/71 (56%), Positives = 52/71 (73%)
Frame = +3
Query: 33 KTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKES 212
KTLTGK I + EP +T+ +K+++ +KEG+P QQRLI+AGKQL D KT DY I+ S
Sbjct: 82 KTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGS 141
Query: 213 TLHMVLRLRGG 245
LH+VL LRGG
Sbjct: 142 VLHLVLALRGG 152
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 122 bits (294), Expect = 4e-29
Identities = 57/76 (75%), Positives = 66/76 (86%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKE +P DQQRLIFAGKQLED +T+ADYN
Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 211
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 212 IQKESTLHLVLRLRGG 227
Score = 118 bits (284), Expect = 7e-28
Identities = 57/76 (75%), Positives = 66/76 (86%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+AD N
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-N 135
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 136 IQKESTLHLVLRLRGG 151
Score = 78.2 bits (184), Expect = 1e-15
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLE 170
MQIF KTLTGKTIT E E + T+ ++K KI DKEG+P DQQRLIFAGKQLE
Sbjct: 228 MQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 278
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 92.3 bits (219), Expect = 5e-20
Identities = 41/72 (56%), Positives = 54/72 (75%)
Frame = +3
Query: 33 KTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKES 212
KTLTGK I + EP +T+ +K+++ +KEG+P QQRLI+AGKQL D KT DYNI+ S
Sbjct: 82 KTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGS 141
Query: 213 TLHMVLRLRGGY 248
LH+VL LRGG+
Sbjct: 142 VLHLVLALRGGF 153
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 125 bits (302), Expect = 5e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 124 bits (300), Expect = 8e-30
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTIT E E ++T+ ++K KI DKEGVP DQQRLIFAGKQL+D +T+ADYN
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 139 IQKESTLHLVLRLRGG 154
Score = 114 bits (275), Expect = 9e-27
Identities = 54/76 (71%), Positives = 63/76 (82%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF +TLT KTI E E ++T ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 155 MQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 214
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRL GG
Sbjct: 215 IQKESTLHLVLRLCGG 230
Score = 109 bits (262), Expect = 3e-25
Identities = 54/77 (70%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDS-KTMADY 194
MQIF TLTGKTIT E E ++T+ ++K KI DKE + DQQRLIFAG+QLED T+ADY
Sbjct: 231 MQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADY 290
Query: 195 NIQKESTLHMVLRLRGG 245
NIQKESTLH+VLRLRGG
Sbjct: 291 NIQKESTLHLVLRLRGG 307
Score = 101 bits (242), Expect = 9e-23
Identities = 46/78 (58%), Positives = 62/78 (79%)
Frame = +3
Query: 12 VKMQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMAD 191
+ MQI KTLT KTIT + ++T+ ++K KI D EG+P+DQQRLIF+GK L+D +T+AD
Sbjct: 1 MSMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLAD 60
Query: 192 YNIQKESTLHMVLRLRGG 245
Y+IQK+S LH+ LRLRGG
Sbjct: 61 YSIQKDSILHLALRLRGG 78
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 114 bits (274), Expect = 1e-26
Identities = 52/76 (68%), Positives = 66/76 (86%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
+QI+ KTLT KTIT + E ++++ ++K KI +KEG+P+DQQRLIFAGKQLED T+ADYN
Sbjct: 3 IQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYN 62
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRLRGG
Sbjct: 63 IQKESTLHLVLRLRGG 78
Score = 111 bits (268), Expect = 6e-26
Identities = 53/76 (69%), Positives = 64/76 (84%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF +TLTGKTIT E + ++T+ ++K KI DKEG+ QQRLIFAGKQLED +T+ADYN
Sbjct: 79 MQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYN 138
Query: 198 IQKESTLHMVLRLRGG 245
IQKESTLH+VLRL GG
Sbjct: 139 IQKESTLHLVLRLCGG 154
Score = 97.5 bits (232), Expect = 1e-21
Identities = 46/74 (62%), Positives = 59/74 (79%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF KTLTGKTI E E ++T+A++K+KI KEG+ DQQ LIF G+QLED T+ DY+
Sbjct: 552 MQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYD 611
Query: 198 IQKESTLHMVLRLR 239
I K+STL++VLRLR
Sbjct: 612 IHKKSTLYLVLRLR 625
Score = 83.4 bits (197), Expect = 3e-17
Identities = 39/76 (51%), Positives = 50/76 (65%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
MQIF K GK IT E ++T+ +K KI DK G P DQQ L+F G QL+D +T+ DYN
Sbjct: 393 MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYN 452
Query: 198 IQKESTLHMVLRLRGG 245
I+ ESTLH+ +R G
Sbjct: 453 IRNESTLHLFFHIRHG 468
Score = 81.8 bits (193), Expect = 8e-17
Identities = 41/76 (53%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQ--QRLIFAGKQLEDSKTMAD 191
MQIF KTLT K I E E +T+ ++K + DKEG+ QRLIF GK+L+D T+AD
Sbjct: 319 MQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLAD 378
Query: 192 YNIQKESTLHMVLRLR 239
Y+IQKESTLH+VL ++
Sbjct: 379 YSIQKESTLHLVLGMQ 394
Score = 80.6 bits (190), Expect = 2e-16
Identities = 42/83 (50%), Positives = 55/83 (66%), Gaps = 7/83 (8%)
Frame = +3
Query: 18 MQIFXKTL-------TGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDS 176
MQIF KT T KTIT E E ++T+ ++K KI K G+P+D+QRLIF G+ L S
Sbjct: 469 MQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGS 528
Query: 177 KTMADYNIQKESTLHMVLRLRGG 245
+T+ DYNIQK ST+H + RGG
Sbjct: 529 RTLLDYNIQKGSTIHQLFLQRGG 551
Score = 77.8 bits (183), Expect = 1e-15
Identities = 40/81 (49%), Positives = 53/81 (65%), Gaps = 5/81 (6%)
Frame = +3
Query: 18 MQIFXKTL-----TGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKT 182
M IF K L TG+ E E ++T+ ++K K+ DKE +P+D RLIFAGK LE +T
Sbjct: 238 MYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRT 297
Query: 183 MADYNIQKESTLHMVLRLRGG 245
+A YNIQK STL++V R R G
Sbjct: 298 LAHYNIQKGSTLYLVTRFRCG 318
Score = 77.0 bits (181), Expect = 2e-15
Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 7/82 (8%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAET-----EPAETVADLKQKIADKEGVPVDQQRLIFAGKQL--EDS 176
MQIF T +GK T++T E ++T+ ++K KI D+EG+ D QRLIF G++L ED+
Sbjct: 155 MQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDN 214
Query: 177 KTMADYNIQKESTLHMVLRLRG 242
+T+ADY I+ STL + LRLRG
Sbjct: 215 RTLADYGIRNRSTLCLALRLRG 236
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 99.1 bits (236), Expect = 5e-22
Identities = 45/73 (61%), Positives = 56/73 (76%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
M IF KTLTG+ I E E +T+ ++K KI DK+G+PVDQQRLIF GKQLED T+ADYN
Sbjct: 86 MFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYN 145
Query: 198 IQKESTLHMVLRL 236
IQ +S LH++ RL
Sbjct: 146 IQNDSILHLIKRL 158
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 79.0 bits (186), Expect = 5e-16
Identities = 36/76 (47%), Positives = 51/76 (67%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
M+I KTLT K I E E +T+ +K++I +KEG+P QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 198 IQKESTLHMVLRLRGG 245
+++ S LH+VL LRGG
Sbjct: 61 LERGSVLHLVLALRGG 76
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 67.3 bits (157), Expect = 2e-12
Identities = 30/72 (41%), Positives = 48/72 (66%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
+++ KTL +T T + ETV K+KIA + GVPV QQRLIF G+ L+D +++Y+
Sbjct: 24 LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83
Query: 198 IQKESTLHMVLR 233
++ TLH+++R
Sbjct: 84 LENGHTLHLIVR 95
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 63.7 bits (148), Expect = 2e-11
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 13/86 (15%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGK------------ 161
M IF KTLTG+T T E + ++T+ +LK K +KEG+PV+QQRLIF G+
Sbjct: 50 MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSIN 109
Query: 162 -QLEDSKTMADYNIQKESTLHMVLRL 236
++ DS D I E T +VLRL
Sbjct: 110 LEVADSSDTIDLKINGEPTRQLVLRL 135
Score = 58.4 bits (135), Expect = 8e-10
Identities = 28/70 (40%), Positives = 45/70 (64%)
Frame = +3
Query: 9 SVKMQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMA 188
+V M+IF T+ KT E + ++T+ LK I D+ G PVDQQ L G +L+++ T++
Sbjct: 138 AVLMRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATIS 197
Query: 189 DYNIQKESTL 218
DYNI+ ++ L
Sbjct: 198 DYNIKPDANL 207
Score = 26.2 bits (55), Expect = 4.1
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLK 98
M I KTL GK I E E + DLK
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTIDLK 27
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 59.3 bits (137), Expect = 5e-10
Identities = 28/78 (35%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Frame = +3
Query: 9 SVKMQIFXKTLTG-KTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTM 185
S ++QIF + ++G KTI E +TV L Q+I K +P +QR+I+ GKQL+ ++
Sbjct: 92 STRLQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSL 151
Query: 186 ADYNIQKESTLHMVLRLR 239
Y+I+++++L +V R++
Sbjct: 152 TYYSIEQDASLQLVARMQ 169
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 53.6 bits (123), Expect = 2e-08
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = +3
Query: 45 GKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHM 224
G + +T TV K+ +A VP +QQRLI+ G+ L+D +T+ Y +Q + T+HM
Sbjct: 27 GTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQADHTIHM 86
Query: 225 V 227
V
Sbjct: 87 V 87
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 53.6 bits (123), Expect = 2e-08
Identities = 25/75 (33%), Positives = 40/75 (53%)
Frame = +3
Query: 3 SNSVKMQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKT 182
+ V + + + G + T TV K+ IA VP +QQRLI+ G+ L+D +T
Sbjct: 13 AEGVAVAVNVRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQT 72
Query: 183 MADYNIQKESTLHMV 227
+ Y +Q + T+HMV
Sbjct: 73 LLSYGLQADHTVHMV 87
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 51.2 bits (117), Expect = 1e-07
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGV--PVDQQRLIFAGKQLEDSKTMAD 191
M+IF KTL+G E +PA+ V+D+K I +G P +Q LI GK L+D T+ +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 192 YNIQKESTLHMVL 230
N+ + S + ++L
Sbjct: 61 NNVVENSFIVIML 73
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 51.2 bits (117), Expect = 1e-07
Identities = 26/67 (38%), Positives = 37/67 (55%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
M ++ T TG + + + ETV ++K+KI +G+PV +Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 198 IQKESTL 218
I ES L
Sbjct: 61 ILFESRL 67
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 48.8 bits (111), Expect = 7e-07
Identities = 30/79 (37%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGK---QLEDSKTMA 188
MQ+F GK E E T+AD+K KI D G+ Q L GK ++ TM
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 189 DYNIQKESTLHMVLRLRGG 245
DY I+ HM R+RGG
Sbjct: 61 DYKIKACDIFHMSDRMRGG 79
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 48.4 bits (110), Expect = 9e-07
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +3
Query: 6 NSVKMQIFXKTLTGKTITAE-TEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKT 182
+S +Q F + L GK++T + P +KQ+I ++ +P QRLI G Q+ D
Sbjct: 5 SSKPLQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSA 64
Query: 183 MADYNIQKESTLHMVLRLRGG 245
++ Q ++T+++VL LRGG
Sbjct: 65 IS----QPDATVNLVLSLRGG 81
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 48.0 bits (109), Expect = 1e-06
Identities = 26/67 (38%), Positives = 35/67 (52%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
M + T TG + + + ETV +K+KI +G+PV +Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 198 IQKESTL 218
I ES L
Sbjct: 61 ILFESLL 67
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 46.4 bits (105), Expect = 4e-06
Identities = 23/77 (29%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +3
Query: 9 SVKMQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQL-EDSKTM 185
SVK + +++G T+ ++++A++K +I G V +Q+L+F+G++L ++ +
Sbjct: 31 SVKSVLVFLSVSGSTMPMLILESDSIAEVKLRIQTCNGFRVRRQKLVFSGRELARNASRV 90
Query: 186 ADYNIQKESTLHMVLRL 236
DY + S LH+VL+L
Sbjct: 91 KDYGVTGGSVLHLVLKL 107
Score = 33.9 bits (74), Expect = 0.020
Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 36 TLTGKTITAETEPAETVADLKQKIADK-EGVP-VDQQRLIFAGKQLEDSKTMADYNIQKE 209
T GK + V LK++I+ + +G P VD Q ++F G++L+D++ +
Sbjct: 117 TTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGICKDGN 176
Query: 210 STLHMVLR 233
S +H++++
Sbjct: 177 SVIHLLVK 184
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 45.6 bits (103), Expect = 6e-06
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAE-TEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADY 194
+Q F + L GK++T + P +KQ+I ++ +P QRLI G Q+ + ++
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66
Query: 195 NIQKESTLHMVLRLRGG 245
Q ++T+++VL LRGG
Sbjct: 67 --QSDTTMNLVLSLRGG 81
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 45.6 bits (103), Expect = 6e-06
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGV---PVDQQRLIFAGKQLEDSKTMA 188
M+IF KTL G E +P ++V D+K+ I +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 189 DYNIQKESTLHMVL 230
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 45.6 bits (103), Expect = 6e-06
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGV---PVDQQRLIFAGKQLEDSKTMA 188
M+IF KTL G E +P ++V D+K+ I +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 189 DYNIQKESTLHMVL 230
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At5g57860.3 68418.m07237 ubiquitin family protein contains Pfam
profile PF00240: Ubiquitin family
Length = 95
Score = 45.2 bits (102), Expect = 8e-06
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +3
Query: 51 TITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQ--LEDSKTMADYNIQKESTLHM 224
T + +P ETV D+KQK+ PV+ QRL+ + LEDSK++AD ++ ++ + +
Sbjct: 13 TYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLADQKVENDAVVAL 72
Query: 225 VLR 233
L+
Sbjct: 73 TLK 75
>At5g57860.2 68418.m07236 ubiquitin family protein contains Pfam
profile PF00240: Ubiquitin family
Length = 95
Score = 45.2 bits (102), Expect = 8e-06
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +3
Query: 51 TITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQ--LEDSKTMADYNIQKESTLHM 224
T + +P ETV D+KQK+ PV+ QRL+ + LEDSK++AD ++ ++ + +
Sbjct: 13 TYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLADQKVENDAVVAL 72
Query: 225 VLR 233
L+
Sbjct: 73 TLK 75
>At5g57860.1 68418.m07235 ubiquitin family protein contains Pfam
profile PF00240: Ubiquitin family
Length = 95
Score = 45.2 bits (102), Expect = 8e-06
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +3
Query: 51 TITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQ--LEDSKTMADYNIQKESTLHM 224
T + +P ETV D+KQK+ PV+ QRL+ + LEDSK++AD ++ ++ + +
Sbjct: 13 TYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLADQKVENDAVVAL 72
Query: 225 VLR 233
L+
Sbjct: 73 TLK 75
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 45.2 bits (102), Expect = 8e-06
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +3
Query: 36 TLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKT-MADYNIQKES 212
TL G I ++++ +K +I G V Q+L+F G++L S + M DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 213 TLHMVLRL 236
LH+VL+L
Sbjct: 100 ILHLVLKL 107
Score = 41.1 bits (92), Expect = 1e-04
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +3
Query: 33 KTLTGKTITAETEPAETVADLKQKIADKEG--VPVDQQRLIFAGKQLEDSKTMADYNIQK 206
KT GK E + +K++I+ K G V D+Q +++ G++LED + D
Sbjct: 116 KTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRND 175
Query: 207 ESTLHMVLR 233
+S LH+++R
Sbjct: 176 DSVLHLLVR 184
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 45.2 bits (102), Expect = 8e-06
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +3
Query: 36 TLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKT-MADYNIQKES 212
TL G I ++++ +K +I G V Q+L+F G++L S + M DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 213 TLHMVLRL 236
LH+VL+L
Sbjct: 100 ILHLVLKL 107
Score = 41.1 bits (92), Expect = 1e-04
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +3
Query: 33 KTLTGKTITAETEPAETVADLKQKIADKEG--VPVDQQRLIFAGKQLEDSKTMADYNIQK 206
KT GK E + +K++I+ K G V D+Q +++ G++LED + D
Sbjct: 116 KTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRND 175
Query: 207 ESTLHMVLR 233
+S LH+++R
Sbjct: 176 DSVLHLLVR 184
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 44.4 bits (100), Expect = 1e-05
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGV-PVDQQRLIFAGKQLEDSKTMADY 194
++I K L T T E V DLKQ I GV P Q RL+F G+ L++ + ++DY
Sbjct: 11 IRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDY 70
Query: 195 NIQKESTLHMV 227
++++ TL++V
Sbjct: 71 HVEEGHTLYLV 81
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 43.6 bits (98), Expect = 3e-05
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLED 173
M +F +T +G T E +TV ++KQKI + +PV +Q L+F G L+D
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQD 52
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 41.9 bits (94), Expect = 8e-05
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADK-EGVPVDQQRLIFAGKQLEDSKTMADY 194
M+I K+L GK E+V+ L+ K + K + + ++ + GK+L+D K++A
Sbjct: 661 MKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAAQ 720
Query: 195 NIQKESTLHMV 227
N+Q S +H++
Sbjct: 721 NVQPNSLVHLI 731
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 41.5 bits (93), Expect = 1e-04
Identities = 20/69 (28%), Positives = 38/69 (55%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
M++ + +G T + + +TV K+KI + +PV +Q + F GK LED + +++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 198 IQKESTLHM 224
I + LH+
Sbjct: 61 ILQNPLLHL 69
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 41.5 bits (93), Expect = 1e-04
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADK-EGVPVDQQRLIFAGKQLEDSKTMADY 194
M+I L GK E+V+ LK K + K + + ++ + GK+LED K++A+
Sbjct: 500 MKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQ 559
Query: 195 NIQKESTLHMV 227
N+Q S +H++
Sbjct: 560 NVQPNSLVHLL 570
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 41.5 bits (93), Expect = 1e-04
Identities = 21/57 (36%), Positives = 34/57 (59%)
Frame = +3
Query: 75 AETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 245
+E V LK+KIA + +P ++Q+L L+D+ ++A YN+ L + LR RGG
Sbjct: 726 SENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGG 782
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 39.5 bits (88), Expect = 4e-04
Identities = 18/71 (25%), Positives = 40/71 (56%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
M+I T + IT + + ETV ++K + + VP+ QQ+L++ G ++ +S ++
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 198 IQKESTLHMVL 230
++ + L M++
Sbjct: 61 VKDDDLLMMMV 71
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 37.9 bits (84), Expect = 0.001
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLED 173
M +F +T +G E +T+ ++K+KI + +PV +Q LIF G L+D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 37.5 bits (83), Expect = 0.002
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
+++ + +G + T + +TV +K+KI +G PV +Q LIF K L+D M
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61
Query: 198 IQKESTL 218
I+ S +
Sbjct: 62 IRHNSRI 68
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 37.1 bits (82), Expect = 0.002
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 197
+ + + +G + T + +TV +K+KI +G PV +Q LIF K L+D M
Sbjct: 36 ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95
Query: 198 IQKESTL 218
I+ S +
Sbjct: 96 IRHNSRI 102
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 33.5 bits (73), Expect = 0.027
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +3
Query: 45 GKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHM 224
GK+I P TV DLK ++ V Q+LIF GK L ++ T+ ++ + L +
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603
Query: 225 V 227
+
Sbjct: 604 M 604
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 33.1 bits (72), Expect = 0.035
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAG 158
M+ + L G + E E +T+ +KQKI + VPV +Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At3g01050.1 68416.m00006 expressed protein
Length = 117
Score = 33.1 bits (72), Expect = 0.035
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Frame = +3
Query: 15 KMQIFXKTLTGKTITAETEP-AETVADLKQKIA-----DKEGVP--VDQQRLIFAGKQLE 170
+++I + G I + P A TV+ LK+ + +KE P V + +LI AGK LE
Sbjct: 7 QLEIKFRLTDGSDIGPKAFPDATTVSALKETVISEWPREKENGPKTVKEVKLISAGKVLE 66
Query: 171 DSKTMADY 194
+SKT+ DY
Sbjct: 67 NSKTVKDY 74
>At5g12280.1 68418.m01444 hypothetical protein
Length = 419
Score = 32.3 bits (70), Expect = 0.062
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +3
Query: 75 AETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNI 200
+E VA LK+KI+ + P ++Q+L L+D+ ++A YN+
Sbjct: 367 SENVASLKEKISGEIQFPTNKQKLRGKAGFLKDNTSLAHYNV 408
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 31.9 bits (69), Expect = 0.082
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 81 TVADLKQKIADKEGVPVDQQRLIFAGKQLED 173
T +LK IA G+ +QRL+F GK+ ED
Sbjct: 100 TFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 31.9 bits (69), Expect = 0.082
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAG 158
M+ + L G + E + +T+ +KQKI + +PV +Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 30.3 bits (65), Expect = 0.25
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 69 EPAETVADLKQKIADKEGVPVDQQRLIFAGKQLED 173
E T +LK ++ G+ QQRL+F GK+ ED
Sbjct: 86 EATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At2g35360.1 68415.m04335 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 225
Score = 29.9 bits (64), Expect = 0.33
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 84 VADLKQKIADKEGVPVDQQRLIFAGKQLEDSK 179
+ DL+ IA+K PV R+I GK L+D +
Sbjct: 41 IRDLRNAIAEKGKFPVSTLRMILRGKALQDEE 72
>At2g32360.1 68415.m03955 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 175
Score = 28.7 bits (61), Expect = 0.76
Identities = 17/79 (21%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQL-------EDS 176
M++ + +TG I + TV +K+KIA + +PV + L+ ++ ED
Sbjct: 1 MKVSVEIITGTFIDTDVSEDATVKQMKEKIAVEVKLPVTRLILVIGDEETRRLVMEDEDD 60
Query: 177 KTMADYNIQKESTLHMVLR 233
+ D + ++S +++ +
Sbjct: 61 MMLRDLGVGEDSHIYLFFK 79
>At4g05240.1 68417.m00791 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 197
Score = 28.3 bits (60), Expect = 1.0
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 78 ETVADLKQKIADKEGVPVDQQRLIFAGKQLED 173
+TV ++KQKI + + V +Q L F G L+D
Sbjct: 78 DTVLEIKQKIEKYQRILVYRQTLFFQGNVLQD 109
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 81 TVADLKQKIADKEGVPVDQQRLIFAGKQLED 173
T+ L+ ++A + G+ + +LIFAGK L+D
Sbjct: 22 TLNMLRDEVAKRSGLDPESIKLIFAGKILKD 52
>At5g63420.1 68418.m07962 metallo-beta-lactamase family protein
Length = 911
Score = 27.1 bits (57), Expect = 2.3
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +3
Query: 60 AETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLR 239
+ETE VAD + K KE D + + + + S N K + V+R+R
Sbjct: 774 SETENMNKVADTEPKAEGKENSRDDDELADASDSETKSSPKRVRKNKWKPEEIKKVIRMR 833
Query: 240 G 242
G
Sbjct: 834 G 834
>At2g31960.1 68415.m03905 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase;
contains non-consensus splice aite AC at exon 33
Length = 1959
Score = 27.1 bits (57), Expect = 2.3
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Frame = -1
Query: 227 HHVKSRFLLNIVIGHSFGIFQL--------FARKDKSLLIYGHTFFIGNFLLEI 90
H K +L IV+ F IFQ F ++++SL IYG ++F+ F+L I
Sbjct: 1760 HSGKRGIILEIVLALRFFIFQYGLVYQLSTFKQENQSLWIYGASWFVILFILLI 1813
>At3g17080.1 68416.m02179 self-incompatibility protein-related
similar to S1 self-incompatibility protein GB:CAA52380
[Papaver rhoeas] (Proc. Natl. Acad. Sci. U.S.A. 91 (6),
2265-2269 (1994))
Length = 134
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 166 WKIPKLWPITIFKRNLLFTWCYDYE 240
WKI K P +K+ +F CY ++
Sbjct: 110 WKIRKNGPCKFYKKTGMFDHCYSWD 134
>At1g53980.1 68414.m06149 polyubiquitin-related contains
similarity to polyubiquitin GI:166336 from
(Aglaothamnion neglectum)
Length = 91
Score = 25.8 bits (54), Expect = 5.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 18 MQIFXKTLTGKTITAETEPAETVADLK 98
M+I KT GKTI E E + D+K
Sbjct: 1 MKILIKTEKGKTINLELEDSSETIDIK 27
>At1g80260.1 68414.m09396 tubulin family protein
Length = 951
Score = 25.4 bits (53), Expect = 7.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2
Query: 172 SSNCLPAKISLC*STGTPSLSAIFCL 95
S L K+S C ST SLS +FCL
Sbjct: 352 SVGSLLTKMSSCSSTADLSLSEVFCL 377
>At5g54060.1 68418.m06723 glycosyltransferase family protein
contains Pfam profile: PF00201 UDP-glucoronosyl and
UDP-glucosyl transferase
Length = 468
Score = 25.0 bits (52), Expect = 9.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 152 CGQTIGRFQNYGRLQYSKGIY 214
C +T G+F +Y QYSK +Y
Sbjct: 225 CRETEGKFCDYISRQYSKPVY 245
>At3g57890.1 68416.m06453 tubulin-specific chaperone C-related
contains weak similarity to Tubulin-specific chaperone C
(Tubulin-folding cofactor C) (CFC) (Swiss-Prot:Q15814)
[Homo sapiens]
Length = 573
Score = 25.0 bits (52), Expect = 9.4
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +3
Query: 66 TEPAETVADLKQKIAD 113
T+P +T+A +KQK+AD
Sbjct: 51 TDPIQTLAPVKQKLAD 66
>At3g44110.1 68416.m04727 DNAJ heat shock protein, putative (J3)
identical to AtJ3 [Arabidopsis thaliana] GI:2641638,
strong similarity to several plant DnaJ proteins from
PGR; contains Pfam profiles PF00226 DnaJ domain, PF00684
DnaJ central domain (4 repeats), PF01556 DnaJ C terminal
region
Length = 420
Score = 25.0 bits (52), Expect = 9.4
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 39 LTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGK 161
L G+++ ++ P E V K EG+P+ QR GK
Sbjct: 294 LDGRSLLIKSNPGEVVKPDSYKAISDEGMPI-YQRPFMKGK 333
>At2g25480.1 68415.m03051 expressed protein
Length = 404
Score = 25.0 bits (52), Expect = 9.4
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +3
Query: 45 GKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHM 224
GK A+ A T A ++K DK+ + Q + EDS+ A + + HM
Sbjct: 336 GKVAPAKAVTASTKAKSERKKPDKDVDDLSQSSPVDDNADPEDSQEQAPRVNEDRNESHM 395
Query: 225 VLRL 236
V+ +
Sbjct: 396 VVEV 399
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,792,786
Number of Sequences: 28952
Number of extensions: 106362
Number of successful extensions: 424
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 414
length of database: 12,070,560
effective HSP length: 70
effective length of database: 10,043,920
effective search space used: 291273680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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