Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19d13
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   6.7  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   8.8  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 622  STTISSPWWT 593
            S+T +SPWWT
Sbjct: 1044 SSTTTSPWWT 1053


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 541 NETTEFHKQSVANCFLLE 488
           N+T +FH  S  N F+++
Sbjct: 573 NKTYDFHNMSFENDFIIQ 590


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 535 SHFKELVESNDFLLCFN 585
           +H  E  ++ DF++CFN
Sbjct: 301 AHVGEGWQNTDFVVCFN 317


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = -2

Query: 239 LSILTSCSCLYTSTELNFGNCFLSMYNRSSSVGTYTIKFSI 117
           LSI+ +CS + +  E  +   FL+ Y    +   +++  +I
Sbjct: 329 LSIVNTCSQIPSEVEDKYTTYFLNTYPHLFNFFEFSVPLAI 369


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,743
Number of Sequences: 336
Number of extensions: 3581
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)