Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19d08
         (449 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    26   0.19 
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   5.4  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.1  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   7.1  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 25.8 bits (54), Expect = 0.19
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 338 VQGLRKKQFHQTRVHLKIVVM 400
           V  +  K FH+  +H+KIV+M
Sbjct: 48  VVSIYSKSFHRNEIHIKIVLM 68


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = +2

Query: 386 KIVVMLIGRRLEIDHQXEK 442
           K  ++L+G +++ID + E+
Sbjct: 222 KTKILLVGLKIDIDQEEER 240


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 353 KKQFHQTRVHLKIVVMLIGR 412
           K  +H  RVH KI+V  +GR
Sbjct: 398 KVNYH--RVHRKIMVQSLGR 415


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 353 KKQFHQTRVHLKIVVMLIGR 412
           K  +H  RVH KI+V  +GR
Sbjct: 123 KVNYH--RVHRKIMVQSLGR 140


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,832
Number of Sequences: 336
Number of extensions: 1020
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)