Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19d08
(449 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 3.6
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 3.6
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 3.6
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 3.6
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 3.6
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 3.6
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 3.6
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 3.6
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 3.6
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 3.6
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 3.6
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 3.6
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 3.6
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 3.6
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 3.6
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 4.7
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 6.2
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 6.2
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 8.2
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 8.2
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 3.6
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 370 NKSPLKDRRDADREKIRDRSPTGEKK 447
N+ ++ R+ RE+ RDR G +
Sbjct: 52 NEREYREYRETSRERSRDRRERGRSR 77
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 3.6
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 370 NKSPLKDRRDADREKIRDRSPTGEKK 447
N+ ++ R+ RE+ RDR G +
Sbjct: 52 NEREYREYRETSRERSRDRRERGRSR 77
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 3.6
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 370 NKSPLKDRRDADREKIRDRSPTGEKK 447
N+ ++ R+ RE+ RDR G +
Sbjct: 52 NEREYREYRETSRERSRDRRERGRSR 77
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 3.6
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 370 NKSPLKDRRDADREKIRDRSPTGEKK 447
N+ ++ R+ RE+ RDR G +
Sbjct: 52 NEREYREYRETSRERSRDRRERGRSR 77
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 3.6
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 370 NKSPLKDRRDADREKIRDRSPTGEKK 447
N+ ++ R+ RE+ RDR G +
Sbjct: 52 NEREYREYRETSRERSRDRRERGRSR 77
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 3.6
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 370 NKSPLKDRRDADREKIRDRSPTGEKK 447
N+ ++ R+ RE+ RDR G +
Sbjct: 52 NEREYREYRETSRERSRDRRERGRSR 77
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 3.6
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 370 NKSPLKDRRDADREKIRDRSPTGEKK 447
N+ ++ R+ RE+ RDR G +
Sbjct: 52 NEREYREYRETSRERSRDRRERGRSR 77
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 3.6
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 370 NKSPLKDRRDADREKIRDRSPTGEKK 447
N+ ++ R+ RE+ RDR G +
Sbjct: 301 NEREYREYRETSRERSRDRRERGRSR 326
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 3.6
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 370 NKSPLKDRRDADREKIRDRSPTGEKK 447
N+ ++ R+ RE+ RDR G +
Sbjct: 301 NEREYREYRETSRERSRDRRERGRSR 326
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 3.6
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 370 NKSPLKDRRDADREKIRDRSPTGEKK 447
N+ ++ R+ RE+ RDR G +
Sbjct: 301 NEREYREYRETSRERSRDRRERGRSR 326
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 3.6
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 370 NKSPLKDRRDADREKIRDRSPTGEKK 447
N+ ++ R+ RE+ RDR G +
Sbjct: 301 NEREYREYRETSRERSRDRRERGRSR 326
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 3.6
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 370 NKSPLKDRRDADREKIRDRSPTGEKK 447
N+ ++ R+ RE+ RDR G +
Sbjct: 301 NEREYREYRETSRERSRDRRERGRSR 326
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 3.6
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 370 NKSPLKDRRDADREKIRDRSPTGEKK 447
N+ ++ R+ RE+ RDR G +
Sbjct: 301 NEREYREYRETSRERSRDRRERGRSR 326
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 3.6
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 370 NKSPLKDRRDADREKIRDRSPTGEKK 447
N+ ++ R+ RE+ RDR G +
Sbjct: 301 NEREYREYRETSRERSRDRRERGRSR 326
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.8 bits (44), Expect = 3.6
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +1
Query: 364 SPNKSPLKDRRDADREKIRDRSPTGEK 444
SPN SP + A I RSP G +
Sbjct: 740 SPNASPSPAEQCASTTTITARSPQGSQ 766
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 4.7
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 370 NKSPLKDRRDADREKIRDRSPTGEKK 447
N+ ++ R+ RE+ RDR G +
Sbjct: 300 NEREYREYRETSRERSRDRRGRGRSR 325
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.0 bits (42), Expect = 6.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 122 LFLAIFNLLCFYL 84
+F+ IFNL+C L
Sbjct: 275 VFMRIFNLICMML 287
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.0 bits (42), Expect = 6.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 122 LFLAIFNLLCFYL 84
+F+ IFNL+C L
Sbjct: 243 VFMRIFNLICMML 255
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 20.6 bits (41), Expect = 8.2
Identities = 5/6 (83%), Positives = 5/6 (83%)
Frame = -2
Query: 214 YYHCCW 197
YY CCW
Sbjct: 485 YYPCCW 490
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 20.6 bits (41), Expect = 8.2
Identities = 5/6 (83%), Positives = 5/6 (83%)
Frame = -2
Query: 214 YYHCCW 197
YY CCW
Sbjct: 538 YYPCCW 543
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,156
Number of Sequences: 438
Number of extensions: 1226
Number of successful extensions: 24
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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