Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19d07
(648 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 26 0.23
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 26 0.23
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 26 0.31
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 26 0.31
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 26 0.31
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 25 0.54
AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory recept... 22 5.0
EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2 pr... 21 8.7
EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1 pr... 21 8.7
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 26.2 bits (55), Expect = 0.23
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = -3
Query: 523 RTVAIQFFIYLIKYIV 476
R V++QFF+Y+I YI+
Sbjct: 133 RNVSVQFFVYVILYIL 148
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 26.2 bits (55), Expect = 0.23
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = -3
Query: 523 RTVAIQFFIYLIKYIV 476
R V++QFF+Y+I YI+
Sbjct: 133 RNVSVQFFVYVILYIL 148
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 25.8 bits (54), Expect = 0.31
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 102 WLSCTLNLARCLRIKYSXXXXXXAAC*RAVPVFCSTTRTWI 224
WL CTL L R R++YS C F + R W+
Sbjct: 582 WL-CTLLLQRGYRVEYSAASDAFTHCPEGFNEFYNQRRRWM 621
Score = 25.0 bits (52), Expect = 0.54
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 476 NDIFNEIDKELNGNCPFIKFIQRDYIFDAQFPPDLLDLLNEYMTKSSIM 622
ND + KE+ G +I + D F P+ L LL +YM K+ +
Sbjct: 454 NDELSAHSKEIRGENTYILALDGDI----DFQPEALHLLVDYMKKNKTL 498
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 25.8 bits (54), Expect = 0.31
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 102 WLSCTLNLARCLRIKYSXXXXXXAAC*RAVPVFCSTTRTWI 224
WL CTL L R R++YS C F + R W+
Sbjct: 815 WL-CTLLLQRGYRVEYSAASDAFTHCPEGFNEFYNQRRRWM 854
Score = 25.0 bits (52), Expect = 0.54
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 476 NDIFNEIDKELNGNCPFIKFIQRDYIFDAQFPPDLLDLLNEYMTKSSIM 622
ND + KE+ G +I + D F P+ L LL +YM K+ +
Sbjct: 687 NDELSAHSKEIRGENTYILALDGDI----DFQPEALHLLVDYMKKNKTL 731
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 25.8 bits (54), Expect = 0.31
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 102 WLSCTLNLARCLRIKYSXXXXXXAAC*RAVPVFCSTTRTWI 224
WL CTL L R R++YS C F + R W+
Sbjct: 815 WL-CTLLLQRGYRVEYSAASDAFTHCPEGFNEFYNQRRRWM 854
Score = 25.0 bits (52), Expect = 0.54
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 476 NDIFNEIDKELNGNCPFIKFIQRDYIFDAQFPPDLLDLLNEYMTKSSIM 622
ND + KE+ G +I + D F P+ L LL +YM K+ +
Sbjct: 687 NDELSAHSKEIRGENTYILALDGDI----DFQPEALHLLVDYMKKNKTL 731
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 25.0 bits (52), Expect = 0.54
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 476 NDIFNEIDKELNGNCPFIKFIQRDYIFDAQFPPDLLDLLNEYMTKSSIM 622
ND + KE+ G +I + D F P+ L LL +YM K+ +
Sbjct: 140 NDELSAHSKEIRGENTYILALDGDI----DFQPEALHLLVDYMKKNKTL 184
>AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory receptor
candidate 31 protein.
Length = 250
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -1
Query: 399 FFSINIELLILRVFALEGCGGSI 331
++ I+ LLI+R+ ++ CG S+
Sbjct: 196 YYLISFALLIMRLISVCLCGASV 218
>EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2
protein.
Length = 237
Score = 21.0 bits (42), Expect = 8.7
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 290 LLGEDMAKHFVDNNILPPHPSNAKTRKINNSMFMLKNFYKGL 415
+LG++ K D P H S K K +N++ LK GL
Sbjct: 17 VLGQENFKCPDDFGFYPHHTSCDKYWKCDNNVAELKTCGNGL 58
>EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1
protein.
Length = 274
Score = 21.0 bits (42), Expect = 8.7
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 290 LLGEDMAKHFVDNNILPPHPSNAKTRKINNSMFMLKNFYKGL 415
+LG++ K D P H S K K +N++ LK GL
Sbjct: 17 VLGQENFKCPDDFGFYPHHTSCDKYWKCDNNVAELKTCGNGL 58
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,780
Number of Sequences: 336
Number of extensions: 3550
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -