Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19d07
         (648 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118353-1|AAM48382.1|  488|Drosophila melanogaster RE01052p pro...    32   0.77 
AE014297-2293|AAF55378.1|  623|Drosophila melanogaster CG4009-PA...    31   1.8  

>AY118353-1|AAM48382.1|  488|Drosophila melanogaster RE01052p
           protein.
          Length = 488

 Score = 31.9 bits (69), Expect = 0.77
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = -1

Query: 345 CGGSILLSTKCLAMS-SPSRYNRNGCMLLSNRGAAHIRTPFQSTYASSNKK---PALPAN 178
           C  +   S +C +   S +RY+ N CMLL +R    I  PF     S + K   P LP+ 
Sbjct: 420 CSSNSCSSNRCSSNKCSSNRYSSNRCMLLLHRQPLAILVPFPMAMISLSPKMPRPPLPSC 479

Query: 177 T 175
           T
Sbjct: 480 T 480


>AE014297-2293|AAF55378.1|  623|Drosophila melanogaster CG4009-PA
           protein.
          Length = 623

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +2

Query: 359 KTRKINNSMFMLKNFYKGLPLFKLK-YTVVNSTKIVTRKPNDIFNEIDKELN 511
           + RKIN + F    +Y  LPLF  + YT +N   I   +P +  N+ D+ +N
Sbjct: 335 EARKINIAQFQKITYYDWLPLFVGRTYTYLNGL-IYPVEPTEYVNDYDETVN 385


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,753,564
Number of Sequences: 53049
Number of extensions: 631374
Number of successful extensions: 1632
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1632
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)