Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19d06
         (463 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical prote...    23   6.9  
AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosens...    23   6.9  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    22   9.1  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    22   9.1  

>AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical protein
           protein.
          Length = 191

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 370 ALRTFTIFCSSIRKALTMRCLTHLWQRTP 284
           ALRT    CS I+K   ++ +T L+   P
Sbjct: 74  ALRTKCARCSPIQKENALKIITRLYYDYP 102


>AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosensory
           protein CSP5 protein.
          Length = 191

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 370 ALRTFTIFCSSIRKALTMRCLTHLWQRTP 284
           ALRT    CS I+K   ++ +T L+   P
Sbjct: 74  ALRTKCARCSPIQKENALKIITRLYYDYP 102


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 273 RVYGGVLCHKCVKQ 314
           ++Y GVL  KC+K+
Sbjct: 290 QIYMGVLTQKCIKE 303


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 236 FSRSSWLDTTEFALALTTP 180
           FSRS W D+  F   +T P
Sbjct: 293 FSRSIWADSIVFDSIITDP 311


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 433,600
Number of Sequences: 2352
Number of extensions: 8413
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39969834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)