Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19d06
(463 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089676-1|AAL90414.1| 168|Drosophila melanogaster RH48056p pro... 175 2e-44
AE014297-925|AAN13422.1| 168|Drosophila melanogaster CG9354-PB,... 175 2e-44
AE014297-924|AAF54369.1| 168|Drosophila melanogaster CG9354-PA,... 175 2e-44
AE014297-3917|AAN14070.1| 162|Drosophila melanogaster CG6090-PB... 175 3e-44
AE014297-3916|AAF56564.2| 162|Drosophila melanogaster CG6090-PA... 175 3e-44
AY071577-1|AAL49199.1| 162|Drosophila melanogaster RE63456p pro... 171 3e-43
AE014297-3919|AAF56566.1| 201|Drosophila melanogaster CG14551-P... 30 1.3
BT022454-1|AAY54870.1| 135|Drosophila melanogaster IP05788p pro... 29 4.0
BT022433-1|AAY54849.1| 135|Drosophila melanogaster IP05688p pro... 29 4.0
AY113610-1|AAM29615.1| 827|Drosophila melanogaster RH61467p pro... 28 7.0
AE014298-1218|AAF46401.2| 827|Drosophila melanogaster CG12772-P... 28 7.0
AE014134-1389|AAF52597.3| 2898|Drosophila melanogaster CG7466-PA... 28 7.0
>AY089676-1|AAL90414.1| 168|Drosophila melanogaster RH48056p
protein.
Length = 168
Score = 175 bits (427), Expect = 2e-44
Identities = 80/104 (76%), Positives = 90/104 (86%)
Frame = +3
Query: 54 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 233
MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK +PRCGQCK KL+GI P+RP+
Sbjct: 1 MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPS 60
Query: 234 ERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKVL 365
ER R+ R KTV R YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 61 ERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIVKAL 104
>AE014297-925|AAN13422.1| 168|Drosophila melanogaster CG9354-PB,
isoform B protein.
Length = 168
Score = 175 bits (427), Expect = 2e-44
Identities = 80/104 (76%), Positives = 90/104 (86%)
Frame = +3
Query: 54 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 233
MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK +PRCGQCK KL+GI P+RP+
Sbjct: 1 MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPS 60
Query: 234 ERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKVL 365
ER R+ R KTV R YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 61 ERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIVKAL 104
>AE014297-924|AAF54369.1| 168|Drosophila melanogaster CG9354-PA,
isoform A protein.
Length = 168
Score = 175 bits (427), Expect = 2e-44
Identities = 80/104 (76%), Positives = 90/104 (86%)
Frame = +3
Query: 54 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 233
MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK +PRCGQCK KL+GI P+RP+
Sbjct: 1 MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPS 60
Query: 234 ERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKVL 365
ER R+ R KTV R YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 61 ERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIVKAL 104
>AE014297-3917|AAN14070.1| 162|Drosophila melanogaster CG6090-PB,
isoform B protein.
Length = 162
Score = 175 bits (425), Expect = 3e-44
Identities = 80/104 (76%), Positives = 89/104 (85%)
Frame = +3
Query: 54 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 233
MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK +PRCGQCK KL GI P+RP+
Sbjct: 1 MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITPSRPS 60
Query: 234 ERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKVL 365
ER R+ R KTV R YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 61 ERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIVKAL 104
>AE014297-3916|AAF56564.2| 162|Drosophila melanogaster CG6090-PA,
isoform A protein.
Length = 162
Score = 175 bits (425), Expect = 3e-44
Identities = 80/104 (76%), Positives = 89/104 (85%)
Frame = +3
Query: 54 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 233
MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK +PRCGQCK KL GI P+RP+
Sbjct: 1 MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITPSRPS 60
Query: 234 ERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKVL 365
ER R+ R KTV R YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 61 ERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIVKAL 104
>AY071577-1|AAL49199.1| 162|Drosophila melanogaster RE63456p
protein.
Length = 162
Score = 171 bits (417), Expect = 3e-43
Identities = 79/104 (75%), Positives = 88/104 (84%)
Frame = +3
Query: 54 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 233
MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK +PRCGQCK KL GI +RP+
Sbjct: 1 MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITASRPS 60
Query: 234 ERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKVL 365
ER R+ R KTV R YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 61 ERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIVKAL 104
>AE014297-3919|AAF56566.1| 201|Drosophila melanogaster CG14551-PA
protein.
Length = 201
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +3
Query: 123 RTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLC-YRKKTVKRVYGGVLCH 299
+ P G L+Y + KP + RC C + A P +R+ RK ++ V H
Sbjct: 115 KQPPGPLIYGMLPKPAVVGRCPTCSGNPERTEVAIPEQRTPWAPERKSWNRKTQEQVKPH 174
Query: 300 KC 305
+C
Sbjct: 175 RC 176
>BT022454-1|AAY54870.1| 135|Drosophila melanogaster IP05788p
protein.
Length = 135
Score = 28.7 bits (61), Expect = 4.0
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +3
Query: 36 LSKSLKMVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGI 215
LS ++K +LSY TKSN +++ P VK KK+ + +CK + R +
Sbjct: 65 LSNNIKNFNNNEKIMQLSYITKSNVNSVIKFPA-----MSVKDKKKLNKKNKCK-RTRKV 118
Query: 216 QPARPAERSRLCYRKK 263
+ + ++ + +KK
Sbjct: 119 EKKKKKKKKKKKKKKK 134
>BT022433-1|AAY54849.1| 135|Drosophila melanogaster IP05688p
protein.
Length = 135
Score = 28.7 bits (61), Expect = 4.0
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +3
Query: 36 LSKSLKMVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGI 215
LS ++K +LSY TKSN +++ P VK KK+ + +CK + R +
Sbjct: 65 LSNNIKNFNNNEKIMQLSYITKSNVNSVIKFPA-----MSVKDKKKLNKKNKCK-RTRKV 118
Query: 216 QPARPAERSRLCYRKK 263
+ + ++ + +KK
Sbjct: 119 EKKKKKKKKKKKKKKK 134
>AY113610-1|AAM29615.1| 827|Drosophila melanogaster RH61467p
protein.
Length = 827
Score = 27.9 bits (59), Expect = 7.0
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 132 GGRLVYQYVKKPKKIPRCGQC 194
GG L+Y + +K ++ RCG C
Sbjct: 777 GGELIYPWQRKVQRCDRCGAC 797
>AE014298-1218|AAF46401.2| 827|Drosophila melanogaster CG12772-PA
protein.
Length = 827
Score = 27.9 bits (59), Expect = 7.0
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 132 GGRLVYQYVKKPKKIPRCGQC 194
GG L+Y + +K ++ RCG C
Sbjct: 777 GGELIYPWQRKVQRCDRCGAC 797
>AE014134-1389|AAF52597.3| 2898|Drosophila melanogaster CG7466-PA
protein.
Length = 2898
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = -2
Query: 216 GYHG-VCSCTDHTLGSSWAF*HTD 148
GY G +C +DH GSSW + TD
Sbjct: 204 GYSGRLCDLSDHPAGSSWRWLATD 227
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,232,130
Number of Sequences: 53049
Number of extensions: 364610
Number of successful extensions: 888
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1539014778
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -