Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19d04
(641 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48285| Best HMM Match : Torsin (HMM E-Value=0) 33 0.20
SB_48253| Best HMM Match : zf-C3HC4 (HMM E-Value=0.12) 32 0.46
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_25082| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_26290| Best HMM Match : zf-C2H2 (HMM E-Value=5.5e-08) 31 0.80
SB_16819| Best HMM Match : BIR (HMM E-Value=7.5e-30) 31 1.1
SB_47201| Best HMM Match : SAM_1 (HMM E-Value=7.1e-09) 29 2.4
SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_37232| Best HMM Match : EGF (HMM E-Value=1) 29 3.2
SB_59423| Best HMM Match : Insulin (HMM E-Value=7.7) 29 4.2
SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33) 29 4.2
SB_5020| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_51334| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_7289| Best HMM Match : EGF_CA (HMM E-Value=0) 28 7.4
SB_47176| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_44755| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_12329| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_3108| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
>SB_48285| Best HMM Match : Torsin (HMM E-Value=0)
Length = 636
Score = 33.1 bits (72), Expect = 0.20
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 337 VRRYNRRVIDFAGIRNKTLEIIKTDRN-LPLNTECNVKAVDSACMRCRRSFAVYPAVTYL 513
V++Y R DF+ ++ + K + P C+ K+ C+ +FA+ YL
Sbjct: 293 VKKYKRSSADFSEDEDQLQTVPKNPKQQTPQQVVCHKKSNRLLCVFMTVAFAIALGSVYL 352
Query: 514 HCGHSCLCTDCDETVNV 564
H LC D + T N+
Sbjct: 353 HLNPHGLCLDGEFTANL 369
>SB_48253| Best HMM Match : zf-C3HC4 (HMM E-Value=0.12)
Length = 156
Score = 31.9 bits (69), Expect = 0.46
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +1
Query: 463 CMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCK 588
C + R S V +CGHSC C+ C + VN CP+C+
Sbjct: 28 CDQYRTSKMKLVPVVMPNCGHSC-CSTCAKRVN--RKCPECR 66
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 31.1 bits (67), Expect = 0.80
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +2
Query: 113 PTTYGHC*KRYCAVRTLFVETKNYQR--NFDSNLPQ-PPRSTTCTTVALRRKRFEFWLAR 283
P TY VRT+ E NY++ +FD N+P P + +++ F W
Sbjct: 325 PCTYFQGSNSQTKVRTMASEPSNYRKSADFDFNMPDTDPTAADAEWKKIQQNTFTRWCNE 384
Query: 284 YLRC 295
+L+C
Sbjct: 385 HLKC 388
>SB_25082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 585
Score = 31.1 bits (67), Expect = 0.80
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 502 VTYLHCGHSCLCTDCDETVNVDNTCPKCKSGI 597
V L+CGH C C C + + + CP C+ I
Sbjct: 548 VVLLNCGHVCSCRTCAQQI---HQCPVCRGDI 576
>SB_26290| Best HMM Match : zf-C2H2 (HMM E-Value=5.5e-08)
Length = 317
Score = 31.1 bits (67), Expect = 0.80
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 448 AVDSACMRCRRSFAVYPAVTYLHCG-HSCLCTDCDETVNVDN 570
A + C C+ F+ + Y G H C+C +C+ET + +N
Sbjct: 225 ATKNKCASCQTEFSRSKDLKYHEKGCHPCVCNECNETFDHEN 266
>SB_16819| Best HMM Match : BIR (HMM E-Value=7.5e-30)
Length = 514
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 472 CRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGIR 600
C+ + +L CGH C C E + + CP C++ IR
Sbjct: 473 CKICMDAEVGIVFLPCGHLSCCPGCAEGMEL---CPMCRAPIR 512
>SB_47201| Best HMM Match : SAM_1 (HMM E-Value=7.1e-09)
Length = 765
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/87 (25%), Positives = 39/87 (44%)
Frame = +1
Query: 340 RRYNRRVIDFAGIRNKTLEIIKTDRNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHC 519
RR + D N+ E I + P + + ++ C+ C+ + V A+ L C
Sbjct: 650 RRQTEKSYDIKLFVNEEEEPIYSPPETPPSQQ---RSTHGTCIVCQ-NLPVTRAL--LPC 703
Query: 520 GHSCLCTDCDETVNVDNTCPKCKSGIR 600
H+C+C C +++ CP C+ IR
Sbjct: 704 RHACVCGSCFS--RLESKCPLCRQVIR 728
>SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 829
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 455 TVHACVAEEVSQFTPPLPICIADIRVCAPIATKR*TWTIRV 577
+VH C A V++FT L +C+ + CA + R T +R+
Sbjct: 411 SVHTCAALVVARFTLVLRLCL-PVHTCAALVFARFTLALRL 450
>SB_37232| Best HMM Match : EGF (HMM E-Value=1)
Length = 79
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 517 CGHSCLCTDCDETVNVDNTCPKCKSGIRYKLK 612
C + C + + VN TCP C G+R ++K
Sbjct: 3 CANGGTCNNGADNVNNTCTCPVCLKGVRCEMK 34
>SB_59423| Best HMM Match : Insulin (HMM E-Value=7.7)
Length = 123
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/100 (22%), Positives = 41/100 (41%)
Frame = +2
Query: 257 KRFEFWLARYLRCTTRPSIGTAARCSRCGATTDV*LTLRAFATKRWKSLRPTETCRSTQN 436
+R+ +AR + S+ A C GA + + LRA SLR + +
Sbjct: 13 ERYAICIARVKSRPKKSSLHLAQTCGISGANVEYSICLRA------SSLREYSVSYTGRR 66
Query: 437 AM*RLSTVHACVAEEVSQFTPPLPICIADIRVCAPIATKR 556
R + + +++P LP+ A + +CA + +R
Sbjct: 67 ERYRPQVFLPMIIRRLLKYSPCLPLVFASVIICAYSSVRR 106
>SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33)
Length = 991
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 40 MFATSWCTCLKKRLVTCRLRPLRFTNNVWPLLKTVLCCAYVVRR 171
+ T+ CT R VTC + LR LL+TV C ++R+
Sbjct: 924 LLRTATCTINLLRTVTCTIDLLRTATCTIDLLRTVTCTINLLRK 967
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 19 TPDTLLAMFATSWCTCLKKRLVTCRLRPLRFTNNVWPLLKTVLCCAYVVR 168
T + + T CT R VTC + LR + LL+TV C ++R
Sbjct: 594 TATCTIDLLRTVTCTINLLRTVTCTINLLRTFTSTINLLRTVTCTINLLR 643
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 19 TPDTLLAMFATSWCTCLKKRLVTCRLRPLRFTNNVWPLLKTVLCCAYVVR 168
T + + T+ CT R VTC + LR LL+TV C ++R
Sbjct: 897 TATCTINLLRTATCTINLLRTVTCTINLLRTATCTINLLRTVTCTIDLLR 946
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 40 MFATSWCTCLKKRLVTCRLRPLRFTNNVWPLLKTVLCCAYVVR 168
+ T+ CT R VTC + LR LL+TV C ++R
Sbjct: 731 LLRTATCTINLLRTVTCTINLLRTVTCTINLLRTVTCTIDLLR 773
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 19 TPDTLLAMFATSWCTCLKKRLVTCRLRPLRFTNNVWPLLKTVLCCAYVVR 168
T + + T CT R VTC + LR LL+TV C ++R
Sbjct: 734 TATCTINLLRTVTCTINLLRTVTCTINLLRTVTCTIDLLRTVTCTINLLR 783
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +1
Query: 31 LLAMFATSWCTCLKKRLVTCRLRPLRFTNNVWPLLKTVLCCAYVVR 168
LL T+ CT R VTC + LR LL+T C ++R
Sbjct: 851 LLRTATTATCTINLLRTVTCTINLLRTVTCTINLLRTATCTINLLR 896
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 40 MFATSWCTCLKKRLVTCRLRPLRFTNNVWPLLKTVLCCAYVVR 168
+ T CT R VTC + LR LL+TV C ++R
Sbjct: 541 LLRTVTCTINLLRTVTCTINLLRTVTCTIDLLRTVTCTINLLR 583
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 40 MFATSWCTCLKKRLVTCRLRPLRFTNNVWPLLKTVLCCAYVVR 168
+ T CT R VTC + LR LL+TV C ++R
Sbjct: 571 LLRTVTCTINLLRTVTCTINLLRTATCTIDLLRTVTCTINLLR 613
>SB_5020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 687
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/63 (31%), Positives = 24/63 (38%)
Frame = +1
Query: 394 EIIKTDRNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNT 573
E + D N CN + S RC F+ G CTD DE V D+T
Sbjct: 400 ECVTGDHTCDKNARCN-NTIGSYHCRCNPGFS----------GDGRECTDIDECVTGDHT 448
Query: 574 CPK 582
C K
Sbjct: 449 CDK 451
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/63 (31%), Positives = 24/63 (38%)
Frame = +1
Query: 394 EIIKTDRNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNT 573
E + D N +CN CM C F+ G CTD DE V D+T
Sbjct: 277 ECVTGDHTCDKNAKCNNTIGSHHCM-CNPGFS----------GDGRECTDIDECVTGDHT 325
Query: 574 CPK 582
C K
Sbjct: 326 CDK 328
>SB_51334| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1402
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = -1
Query: 284 SERAKTRSACV-LTRPSCMLLSAAV-GVNWNRNSVGNF*FRRTTYAQHNTVFNNGHTLLV 111
++R KT + + LT S L V G N V F HN +FN+ H L+
Sbjct: 1121 AQRCKTPGSTLDLTDASSFLYRMEVEGQNVGDRWVDLLPFWAPHVDDHNMIFNDAHMLMC 1180
Query: 110 KRSGRRRHVTKRFFKQVHQLVANIAS 33
+ +T + K + + V+ +S
Sbjct: 1181 TLGAKDEEMTLKLMKSLQEYVSEGSS 1206
>SB_7289| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 278
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/63 (31%), Positives = 24/63 (38%)
Frame = +1
Query: 394 EIIKTDRNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNT 573
E + D N CN CM C F+ G+ CTD DE V D+T
Sbjct: 176 ECVTGDHTCDKNARCNNTIGSYHCM-CNPGFS----------GNGRECTDIDECVTGDHT 224
Query: 574 CPK 582
C K
Sbjct: 225 CDK 227
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/63 (31%), Positives = 24/63 (38%)
Frame = +1
Query: 394 EIIKTDRNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNT 573
E + D N CN CM C F+ G+ CTD DE V D+T
Sbjct: 217 ECVTGDHTCDKNARCNNTIGSYHCM-CNPGFS----------GNGRECTDIDECVTGDHT 265
Query: 574 CPK 582
C K
Sbjct: 266 CDK 268
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/63 (31%), Positives = 24/63 (38%)
Frame = +1
Query: 394 EIIKTDRNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNT 573
E + D N +CN CM C F+ G CTD DE V D+T
Sbjct: 135 ECVTGDHTCDKNAKCNNTIGSYHCM-CNPGFS----------GDGRECTDIDECVTGDHT 183
Query: 574 CPK 582
C K
Sbjct: 184 CDK 186
>SB_47176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 471
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/63 (31%), Positives = 24/63 (38%)
Frame = +1
Query: 394 EIIKTDRNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNT 573
E + D N +CN CM C F+ G CTD DE V D+T
Sbjct: 63 ECVTGDHTCDKNAKCNNTIGSYHCM-CNPGFS----------GDGRECTDIDECVTGDHT 111
Query: 574 CPK 582
C K
Sbjct: 112 CDK 114
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/63 (31%), Positives = 25/63 (39%)
Frame = +1
Query: 394 EIIKTDRNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNT 573
E + D N +CN CM C F+ G+ CTD DE V D+T
Sbjct: 268 ECVTGDHTCDKNAKCNNIIGSYHCM-CNPGFS----------GNGRECTDIDECVTGDHT 316
Query: 574 CPK 582
C K
Sbjct: 317 CDK 319
>SB_44755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 317
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/63 (25%), Positives = 28/63 (44%)
Frame = -3
Query: 504 NGGVNCETSSATHACTVDSLHIAFCVERQVSVGLNDFQRFVANARKVNYTSVVAPHREHL 325
N + ++ T CT L++AF V+ S+ F RF +K+ + V+ +
Sbjct: 25 NDDIEVSLANGTITCTTKKLNLAFVVDGSGSINNARFGRFREFVKKMAESFPVSATNTQV 84
Query: 324 AAV 316
A V
Sbjct: 85 ATV 87
>SB_12329| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Frame = +1
Query: 346 YNRRVIDFAGIRNKTLEIIKTDRNLPLNTECNVKAVDSAC---MRCRRSFAVYPAVTYLH 516
YN+ G+ N E +L +++ +++ S +RC+ +
Sbjct: 101 YNQGCDPINGVTNNVREAEPPTHDLNASSDYSLQEKLSKLEDGLRCKVCMDEQINAVLIP 160
Query: 517 CGHSCLCTDCDETVNVDNTCPKCKSGIRYKLK 612
CGH C C +N++ CP C+ I + K
Sbjct: 161 CGHMVCCEQC--AMNLE-ACPVCRGAIDHVQK 189
>SB_3108| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/63 (31%), Positives = 24/63 (38%)
Frame = +1
Query: 394 EIIKTDRNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNT 573
E + D N +CN CM C F+ G CTD DE V D+T
Sbjct: 281 ECVTGDHTCDKNAKCNNTIGSYHCM-CNPGFS----------GDGRECTDIDECVTGDHT 329
Query: 574 CPK 582
C K
Sbjct: 330 CDK 332
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/63 (31%), Positives = 24/63 (38%)
Frame = +1
Query: 394 EIIKTDRNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNT 573
E + D N +CN CM C F+ G CTD DE V D+T
Sbjct: 404 ECVTGDHTCDKNAKCNNTIGSYHCM-CNPGFS----------GDGRECTDIDECVTGDHT 452
Query: 574 CPK 582
C K
Sbjct: 453 CDK 455
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/63 (31%), Positives = 24/63 (38%)
Frame = +1
Query: 394 EIIKTDRNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNT 573
E + D N +CN CM C F+ G CTD DE V D+T
Sbjct: 486 ECVTGDHTCDKNAKCNNTIGSYHCM-CNPGFS----------GDGRNCTDIDECVTGDHT 534
Query: 574 CPK 582
C K
Sbjct: 535 CDK 537
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,489,106
Number of Sequences: 59808
Number of extensions: 440654
Number of successful extensions: 1502
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1499
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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