Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19d01
         (369 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X12452-1|CAA30982.1|  376|Drosophila melanogaster 87E actin prot...    28   3.3  
K00674-1|AAA28320.1|  376|Drosophila melanogaster protein ( D.me...    28   3.3  
K00673-1|AAA28319.1|  376|Drosophila melanogaster protein ( D.me...    28   3.3  
BT016152-1|AAV37037.1|  376|Drosophila melanogaster AT14584p pro...    28   3.3  
AY113405-1|AAM29410.1|  341|Drosophila melanogaster RE12057p pro...    28   3.3  
AY089587-1|AAL90325.1|  376|Drosophila melanogaster RE14441p pro...    28   3.3  
AY089535-1|AAL90273.1|  360|Drosophila melanogaster LD04994p pro...    28   3.3  
AE014297-1691|AAN13567.1|  376|Drosophila melanogaster CG18290-P...    28   3.3  
AE014297-1690|AAF54950.2|  376|Drosophila melanogaster CG18290-P...    28   3.3  
AE013599-3086|AAF46640.1|  376|Drosophila melanogaster CG10067-P...    28   3.3  

>X12452-1|CAA30982.1|  376|Drosophila melanogaster 87E actin
           protein.
          Length = 376

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 107 LSSVYLHERVYNLILLCAVYINKHL*KELIM 15
           + S  +HE VYN I+ C V I K L   ++M
Sbjct: 270 MESCGIHETVYNSIMKCDVDIRKDLYANIVM 300


>K00674-1|AAA28320.1|  376|Drosophila melanogaster protein (
           D.melanogaster actingene, complete cds, locus 87E. ).
          Length = 376

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 107 LSSVYLHERVYNLILLCAVYINKHL*KELIM 15
           + S  +HE VYN I+ C V I K L   ++M
Sbjct: 270 MESCGIHETVYNSIMKCDVDIRKDLYANIVM 300


>K00673-1|AAA28319.1|  376|Drosophila melanogaster protein (
           D.melanogaster actingene, exon 2, locus 57A. ).
          Length = 376

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 107 LSSVYLHERVYNLILLCAVYINKHL*KELIM 15
           + S  +HE VYN I+ C V I K L   ++M
Sbjct: 270 MESCGIHETVYNSIMKCDVDIRKDLYANIVM 300


>BT016152-1|AAV37037.1|  376|Drosophila melanogaster AT14584p
           protein.
          Length = 376

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 107 LSSVYLHERVYNLILLCAVYINKHL*KELIM 15
           + S  +HE VYN I+ C V I K L   ++M
Sbjct: 270 MESCGIHETVYNSIMKCDVDIRKDLYANIVM 300


>AY113405-1|AAM29410.1|  341|Drosophila melanogaster RE12057p
           protein.
          Length = 341

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 107 LSSVYLHERVYNLILLCAVYINKHL*KELIM 15
           + S  +HE VYN I+ C V I K L   ++M
Sbjct: 235 MESCGIHETVYNSIMKCDVDIRKDLYANIVM 265


>AY089587-1|AAL90325.1|  376|Drosophila melanogaster RE14441p
           protein.
          Length = 376

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 107 LSSVYLHERVYNLILLCAVYINKHL*KELIM 15
           + S  +HE VYN I+ C V I K L   ++M
Sbjct: 270 MESCGIHETVYNSIMKCDVDIRKDLYANIVM 300


>AY089535-1|AAL90273.1|  360|Drosophila melanogaster LD04994p
           protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 107 LSSVYLHERVYNLILLCAVYINKHL*KELIM 15
           + S  +HE VYN I+ C V I K L   ++M
Sbjct: 254 MESCGIHETVYNSIMKCDVDIRKDLYANIVM 284


>AE014297-1691|AAN13567.1|  376|Drosophila melanogaster CG18290-PB,
           isoform B protein.
          Length = 376

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 107 LSSVYLHERVYNLILLCAVYINKHL*KELIM 15
           + S  +HE VYN I+ C V I K L   ++M
Sbjct: 270 MESCGIHETVYNSIMKCDVDIRKDLYANIVM 300


>AE014297-1690|AAF54950.2|  376|Drosophila melanogaster CG18290-PA,
           isoform A protein.
          Length = 376

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 107 LSSVYLHERVYNLILLCAVYINKHL*KELIM 15
           + S  +HE VYN I+ C V I K L   ++M
Sbjct: 270 MESCGIHETVYNSIMKCDVDIRKDLYANIVM 300


>AE013599-3086|AAF46640.1|  376|Drosophila melanogaster CG10067-PA,
           isoform A protein.
          Length = 376

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 107 LSSVYLHERVYNLILLCAVYINKHL*KELIM 15
           + S  +HE VYN I+ C V I K L   ++M
Sbjct: 270 MESCGIHETVYNSIMKCDVDIRKDLYANIVM 300


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,030,664
Number of Sequences: 53049
Number of extensions: 242565
Number of successful extensions: 363
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 363
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 964005624
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)