Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19c24
(424 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81; Eukary... 138 4e-32
UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33; Eukary... 108 5e-23
UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellula... 106 2e-22
UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6; Alveola... 86 2e-16
UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1; ... 82 4e-15
UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15 ... 81 9e-15
UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2; Cryptos... 80 2e-14
UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=... 77 1e-13
UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, wh... 74 1e-12
UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S riboso... 60 2e-08
UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia intestina... 58 6e-08
UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza sativa... 55 5e-07
UniRef50_A2E6R2 Cluster: Ribosomal protein L29, putative; n=4; T... 50 2e-05
UniRef50_Q019M2 Cluster: DNAJ_NEIMB Chaperone protein dnaJ sp|P6... 47 1e-04
UniRef50_Q8ST62 Cluster: Similarity to 60S ribosomal protein L35... 47 2e-04
UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniper... 44 0.002
UniRef50_Q9UXG6 Cluster: Putative uncharacterized protein ORF-c4... 38 0.085
UniRef50_UPI0000EBD742 Cluster: PREDICTED: similar to 60S riboso... 37 0.15
UniRef50_A0D1A4 Cluster: Chromosome undetermined scaffold_34, wh... 35 0.79
UniRef50_A5BMW0 Cluster: Putative uncharacterized protein; n=1; ... 33 1.8
UniRef50_Q9I8B0 Cluster: Surfeit locus protein 6 homolog; n=5; E... 33 2.4
UniRef50_UPI0000499951 Cluster: hypothetical protein 264.t00009;... 33 3.2
UniRef50_Q4Z2R9 Cluster: Putative uncharacterized protein; n=3; ... 33 3.2
UniRef50_Q7Z7F7 Cluster: 39S ribosomal protein L55, mitochondria... 33 3.2
UniRef50_UPI0000498AB1 Cluster: hypothetical protein 21.t00051; ... 32 4.2
UniRef50_Q06SJ3 Cluster: Chloroplast 30S ribosomal protein S4; n... 32 5.6
UniRef50_A6G958 Cluster: Putative uncharacterized protein; n=1; ... 31 7.4
UniRef50_A4AC55 Cluster: Putative uncharacterized protein; n=1; ... 31 7.4
UniRef50_UPI0000F1D785 Cluster: PREDICTED: similar to LOC553316 ... 31 9.7
UniRef50_Q8Y3Q8 Cluster: Lmo2775 protein; n=5; Listeria|Rep: Lmo... 31 9.7
UniRef50_Q4Y885 Cluster: Putative uncharacterized protein; n=7; ... 31 9.7
UniRef50_A7SHI3 Cluster: Predicted protein; n=1; Nematostella ve... 31 9.7
>UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81;
Eukaryota|Rep: 60S ribosomal protein L35 - Homo sapiens
(Human)
Length = 123
Score = 138 bits (334), Expect = 4e-32
Identities = 72/123 (58%), Positives = 83/123 (67%)
Frame = +2
Query: 41 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 220
M K+K +LR K + LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 221 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 400
+Q K NLR YK KKYKPLDLR KKTRAMR+ L KHE +KT+K+ RK+ L+P R YA
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYA 120
Query: 401 VKA 409
VKA
Sbjct: 121 VKA 123
>UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33;
Eukaryota|Rep: 60S ribosomal protein L35 -
Caenorhabditis elegans
Length = 123
Score = 108 bits (259), Expect = 5e-23
Identities = 59/123 (47%), Positives = 73/123 (59%)
Frame = +2
Query: 41 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 220
M K+KC LR + LRV+KVTGG ASKLSKIRVVRK IAR+ V
Sbjct: 1 MTKLKCKSLRGEKKDALQKKLDEQKTELATLRVSKVTGGAASKLSKIRVVRKNIARLLTV 60
Query: 221 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 400
+Q K LR Y + KYKP+DLR KKTRA+R+ LT HE +++ K+ K R +A
Sbjct: 61 INQTQKQELRKFYADHKYKPIDLRLKKTRAIRRRLTAHELSLRSAKQQAKSRNQAVRKFA 120
Query: 401 VKA 409
VKA
Sbjct: 121 VKA 123
>UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellular
organisms|Rep: 60S ribosomal protein L35 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 203
Score = 106 bits (254), Expect = 2e-22
Identities = 56/125 (44%), Positives = 72/125 (57%)
Frame = +2
Query: 32 TVKMGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARV 211
T+ KVK +L K + LRV K+ G +SK +I VRK+IARV
Sbjct: 61 TMSTSKVKAGQLWGKSKEELSKQLEELKTELSQLRVQKIAAGASSKTQRIHDVRKSIARV 120
Query: 212 YIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPR 391
V + + LR YKNKKY PLDLR + TRA+R+ LTKHEA +KT K+ +K+ FP R
Sbjct: 121 LTVINANQRAQLRLFYKNKKYTPLDLRPRLTRALRRRLTKHEATLKTEKQRKKEIHFPQR 180
Query: 392 VYAVK 406
YAVK
Sbjct: 181 KYAVK 185
>UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6;
Alveolata|Rep: 60S ribosomal protein L35 - Theileria
annulata
Length = 142
Score = 86.2 bits (204), Expect = 2e-16
Identities = 50/121 (41%), Positives = 64/121 (52%)
Frame = +2
Query: 47 KVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYH 226
K++ ELR K RV+KVT SKLSKI +VRKA+A+V VY+
Sbjct: 22 KLRVFELRDKSDAELLKLLDDLKQELATFRVSKVTATGTSKLSKITLVRKAVAKVLTVYN 81
Query: 227 QKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 406
Q+ K R YK PL+LR K TRA RK LT + +KT KE ++ P R YA+
Sbjct: 82 QRKKEEARKKYKKLSKTPLNLRPKLTRAKRKGLTTKQLTMKTIKERKRAENLPKRKYALL 141
Query: 407 A 409
A
Sbjct: 142 A 142
>UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 218
Score = 82.2 bits (194), Expect = 4e-15
Identities = 44/103 (42%), Positives = 60/103 (58%)
Frame = +2
Query: 50 VKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 229
VK EL++K NLRV KV GG +SK+ +I +RK IARV V +Q
Sbjct: 77 VKTFELQSKSKTDLTKQLEELKTELLNLRVQKVAGGSSSKILRINSLRKDIARVLTVMNQ 136
Query: 230 KMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRK 358
K + NLR YK K PLDLRAKKTRA+R+ L + +++++
Sbjct: 137 KQRANLREFYKGKSQIPLDLRAKKTRAIRRKLNQQRFAMRSQR 179
>UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15
protein - Plasmodium falciparum
Length = 124
Score = 81.0 bits (191), Expect = 9e-15
Identities = 49/121 (40%), Positives = 63/121 (52%)
Frame = +2
Query: 41 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 220
M VK ELRT + LR++K G A K SKI VRK +ARV V
Sbjct: 1 MSNVKAYELRTLKKKELLDKLDELKKELSGLRISKALGNSA-KNSKIHGVRKNVARVLTV 59
Query: 221 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 400
Y+QK K+ LR YKNKK+KP +LR K T+ R L+ + T ++ +K FP R Y
Sbjct: 60 YNQKRKMELRQLYKNKKFKPYNLRKKLTKNKRLQLSPKQKAAMTLRQKKKVQNFPQRKYL 119
Query: 401 V 403
V
Sbjct: 120 V 120
>UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L35 -
Cryptosporidium hominis
Length = 126
Score = 79.8 bits (188), Expect = 2e-14
Identities = 43/94 (45%), Positives = 58/94 (61%)
Frame = +2
Query: 128 NLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTR 307
+LRV + TG +KLS+I VVRK IAR+ + Q+ +LR + K+ PLDLR K TR
Sbjct: 33 SLRVIQSTGTAPNKLSRINVVRKGIARILTILSQRNIKSLREKHAGSKFMPLDLRKKLTR 92
Query: 308 AMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 409
A R+ALT +AK T K +K FP R +A+ A
Sbjct: 93 AKRRALTPQQAKKMTVKASKKALNFPKRKFAIIA 126
>UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=5;
Trypanosomatidae|Rep: 60S ribosomal protein L35,
putative - Leishmania major
Length = 127
Score = 77.0 bits (181), Expect = 1e-13
Identities = 44/122 (36%), Positives = 66/122 (54%), Gaps = 3/122 (2%)
Frame = +2
Query: 50 VKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 229
+K +LR K + LRV + TGG ++L +IR +RK+IAR+ V +Q
Sbjct: 5 MKIKDLREKSKDDLLKTLTEYKKELSQLRVVQQTGGAETRLGRIRPIRKSIARILTVLNQ 64
Query: 230 KMKVNLRNHYKNKKYK---PLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 400
+ NL+ Y ++K + P LR K T R AL ++E KT +++R+ FP RVYA
Sbjct: 65 NERSNLKMFYADRKLRCKTPKVLRTKLTHRRRLALKENEKNRKTSRQMRQAHKFPKRVYA 124
Query: 401 VK 406
VK
Sbjct: 125 VK 126
>UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=9; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_44, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 125
Score = 74.1 bits (174), Expect = 1e-12
Identities = 41/120 (34%), Positives = 67/120 (55%)
Frame = +2
Query: 47 KVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYH 226
K K +LR + LR KV+ G A KL +I +VRK IA+ V +
Sbjct: 5 KFKVKKLREQKPEDLVKDLEKLKGELIQLRTVKVSAGNAQKLGRIGLVRKRIAKFLTVIN 64
Query: 227 QKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 406
++ + +++N K+ P+DLR KKTRA+R+ LT+ E KT+++ ++ + FP R +A+K
Sbjct: 65 EQRRNSVKNAAKSSTKLPVDLRGKKTRAIRQRLTRSERAQKTQRQWKRLNNFPLRKFALK 124
>UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Homo sapiens|Rep: PREDICTED: similar
to 60S ribosomal protein L35 - Homo sapiens
Length = 106
Score = 60.1 bits (139), Expect = 2e-08
Identities = 30/58 (51%), Positives = 38/58 (65%)
Frame = +2
Query: 236 KVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 409
K NL YK KKYK L LR KKTRA+R+ L+KHE + +K+ + + L P R AVKA
Sbjct: 43 KENLGKFYKGKKYKHLHLRPKKTRAVRRPLSKHEENLTIKKQQQSEQLSPVRKCAVKA 100
>UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia
intestinalis|Rep: GLP_2_9191_9649 - Giardia lamblia ATCC
50803
Length = 152
Score = 58.4 bits (135), Expect = 6e-08
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Frame = +2
Query: 128 NLRVAKVTGG-VASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKT 304
+LR K T G V ++++ RV +K +ARV V +QK + R ++ ++ P R + T
Sbjct: 58 SLRTMKATAGPVPERIARFRVCKKDVARVLTVINQKARDEARAAFEGAEHIPKTFRPRLT 117
Query: 305 RAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 406
AMR LT+ + ++ K +++K FP YAVK
Sbjct: 118 HAMRCQLTEKQKRLLPSKLMKRKLQFPKLKYAVK 151
>UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza
sativa|Rep: Os06g0732000 protein - Oryza sativa subsp.
japonica (Rice)
Length = 290
Score = 55.2 bits (127), Expect = 5e-07
Identities = 39/106 (36%), Positives = 52/106 (49%)
Frame = +2
Query: 29 VTVKMGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIAR 208
VTV M ++K LR ++ + LRVA+VTGG +KLS I+ VR A+
Sbjct: 104 VTVAMARIKVDVLRGRNKAELQAQLKDLKAELSVLRVARVTGGAPNKLSNIK-VRTALRE 162
Query: 209 VYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKI 346
Y K K PLDLR KKT A+R+ LTKH+ +
Sbjct: 163 AY-------------KKKKKSLLPLDLRPKKTCAIRRRLTKHQGML 195
>UniRef50_A2E6R2 Cluster: Ribosomal protein L29, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L29,
putative - Trichomonas vaginalis G3
Length = 124
Score = 50.0 bits (114), Expect = 2e-05
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Frame = +2
Query: 41 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 220
MG +K EL K L+ K A+KL++I+ R+ +ARV +
Sbjct: 1 MGHLKGKELIKKTRQELLDELAGLEKKLFELKGQKAASAAATKLTEIKNTRRDVARVKSI 60
Query: 221 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALT-KHEAKIKTRKEIRKKSLFPPRVY 397
+ L+ Y K P+DLR + +++R L K+ K+ ++ R K LF R +
Sbjct: 61 LMVSQRKALQEKYAKAKLVPIDLRKHQEKSLRNKLAPKYANKLTAQESRRHKCLF-ERKF 119
Query: 398 AVKA 409
A+KA
Sbjct: 120 ALKA 123
>UniRef50_Q019M2 Cluster: DNAJ_NEIMB Chaperone protein dnaJ
sp|P63968|DNAJ_NEIMA Chaperone protein dnaJ
gb|AAF40528.1| dna; n=2; Ostreococcus|Rep: DNAJ_NEIMB
Chaperone protein dnaJ sp|P63968|DNAJ_NEIMA Chaperone
protein dnaJ gb|AAF40528.1| dna - Ostreococcus tauri
Length = 575
Score = 47.2 bits (107), Expect = 1e-04
Identities = 38/96 (39%), Positives = 42/96 (43%)
Frame = -2
Query: 420 FXIQALTA*TLGGKRDFFLISFLVLIFASCLVRALRIARVFLALKSKGXXXXXXXXXXXX 241
F AL+A GK F V S LV+A R+ARVF KS G
Sbjct: 390 FQTYALSAYLRCGKAASFFAWRAVFAPFSDLVKARRMARVFFLRKSSGWYFAPSYADRKD 449
Query: 240 XXXFW*YTM*TRAIAFLTTRILDSLEATPPVTLATR 133
W T+ AIA T IL SL PPVTLATR
Sbjct: 450 ANCLWRITVRVCAIANRTCLILLSLPGAPPVTLATR 485
>UniRef50_Q8ST62 Cluster: Similarity to 60S ribosomal protein L35;
n=2; Encephalitozoon cuniculi|Rep: Similarity to 60S
ribosomal protein L35 - Encephalitozoon cuniculi
Length = 122
Score = 46.8 bits (106), Expect = 2e-04
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Frame = +2
Query: 131 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYK--PLDLRAKKT 304
LR K +G V + + I+ +K +AR V +K+ L Y+ P +LR K
Sbjct: 30 LRQKKNSGDVGA--NDIKTAKKNLARALTVRREKILEELVEAYRGTPVSKLPKELRPKLN 87
Query: 305 RAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 400
R+ R+ALTK + + KTR++ + S FP ++A
Sbjct: 88 RSKRRALTKTQLRRKTRRQRARMSKFPRVIFA 119
>UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniperca
chuatsi|Rep: 60S ribosomal protein L35 - Siniperca
chuatsi (Chinese perch)
Length = 57
Score = 43.6 bits (98), Expect = 0.002
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +2
Query: 275 KPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKK-SLFPPRV 394
KPLDLR KKTR +R+ L KHE ++T+K ++ L P++
Sbjct: 1 KPLDLRPKKTRVLRRRLNKHEESLRTKKTAEERPPLLDPQI 41
>UniRef50_Q9UXG6 Cluster: Putative uncharacterized protein
ORF-c40_015; n=1; Sulfolobus solfataricus|Rep: Putative
uncharacterized protein ORF-c40_015 - Sulfolobus
solfataricus
Length = 360
Score = 37.9 bits (84), Expect = 0.085
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +2
Query: 149 TGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKA-- 322
T G+ S L K ++ IV+ QK+K +L +Y+NK + K+R+ RKA
Sbjct: 183 TVGLNSMLHKFELIYTIDPDYIIVFDQKIKDSLPENYRNKAILLKSVNLHKSRSERKANR 242
Query: 323 LTKHEAKIKTRKEIRKKS 376
+ K+E K K I+ S
Sbjct: 243 IAKYERYFKEAKNIKTLS 260
>UniRef50_UPI0000EBD742 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Bos taurus|Rep: PREDICTED: similar to
60S ribosomal protein L35 - Bos taurus
Length = 98
Score = 37.1 bits (82), Expect = 0.15
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +2
Query: 131 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKT 304
L + K+T V+SK SKI V K I+R+ V +Q K NLR KYKPL + T
Sbjct: 17 LGIIKMTSSVSSKPSKILGVCKFISRLLTVVNQTQKENLR------KYKPLQSKKAHT 68
>UniRef50_A0D1A4 Cluster: Chromosome undetermined scaffold_34, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_34,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 485
Score = 34.7 bits (76), Expect = 0.79
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +2
Query: 206 RVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKE 361
R Y++ +Q + + L N YKN+K +R+ K +K K KIK RK+
Sbjct: 280 RNYLIQNQIIILQLSNSYKNRKLSKKKIRSLKKSKKKKFKLKSILKIKKRKK 331
>UniRef50_A5BMW0 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 33.5 bits (73), Expect = 1.8
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 167 KLSKIRVVRKAIARVYIVYHQKMKVNLRNHYK-NKKYKPLDLRAKKTRAMRKALTKHEAK 343
+L K + +K + Y+ QK ++ R K NK+ K L + +K + K K + +
Sbjct: 110 QLKKKKKKKKKQKKQYLEKKQKKQLKKRKKKKKNKQNKQLTKKLRKQKMKNKKXKKQKKQ 169
Query: 344 IKTRKEIRKK 373
K RK+++KK
Sbjct: 170 RKQRKQLKKK 179
>UniRef50_Q9I8B0 Cluster: Surfeit locus protein 6 homolog; n=5;
Euteleostomi|Rep: Surfeit locus protein 6 homolog -
Xenopus laevis (African clawed frog)
Length = 341
Score = 33.1 bits (72), Expect = 2.4
Identities = 28/86 (32%), Positives = 43/86 (50%)
Frame = +2
Query: 149 TGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALT 328
TG AS S + ++RK + +K++ + R+ NK P D A+K R RK
Sbjct: 89 TGTAASSFSTVDILRKRL-------QEKIQES-RSQLSNKSLTPED--AEKRRQRRKQ-- 136
Query: 329 KHEAKIKTRKEIRKKSLFPPRVYAVK 406
+ E K + RKE++KK+ P VK
Sbjct: 137 ERERKKRKRKELKKKAAQEPEGNEVK 162
>UniRef50_UPI0000499951 Cluster: hypothetical protein 264.t00009;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 264.t00009 - Entamoeba histolytica HM-1:IMSS
Length = 490
Score = 32.7 bits (71), Expect = 3.2
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +2
Query: 191 RKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRK 370
RKA + ++ + K N+ +K K+Y+ + K+ + K L K +KI RK K
Sbjct: 146 RKAQLKRRMLKKRMSKRNIMKFFKRKQYQSKKISKKQVKKAAKILLKKYSKILARKNNHK 205
Query: 371 KS 376
K+
Sbjct: 206 KT 207
>UniRef50_Q4Z2R9 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 819
Score = 32.7 bits (71), Expect = 3.2
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +2
Query: 128 NLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTR 307
N+RV + V SK +I ++ K + Y ++ K+ +N Y+N+K K + KT+
Sbjct: 559 NVRVYVLIKNVVSK-KQIDIMNKLEGEQKLRYKERKKIREQNLYRNEKIKDRNGNHLKTK 617
Query: 308 AMRKALTKHEAK 343
L HE K
Sbjct: 618 NEEYYLLPHEKK 629
>UniRef50_Q7Z7F7 Cluster: 39S ribosomal protein L55, mitochondrial
precursor; n=17; Eutheria|Rep: 39S ribosomal protein
L55, mitochondrial precursor - Homo sapiens (Human)
Length = 128
Score = 32.7 bits (71), Expect = 3.2
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +2
Query: 161 ASKLSKIRVVRKAIARVY---IVYHQKMKVNLRNHYKNKKYK-PLDLRAKKTRAMRKALT 328
+S+ S RV R+A AR+Y +V +++R + P+DL R L
Sbjct: 35 SSRASLTRVHRQAYARLYPVLLVKQDGSTIHIRYREPRRMLAMPIDLDTLSPEERRARLR 94
Query: 329 KHEAKIKTRKEIRKK 373
K EA++++RKE ++
Sbjct: 95 KREAQLQSRKEYEQE 109
>UniRef50_UPI0000498AB1 Cluster: hypothetical protein 21.t00051;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 21.t00051 - Entamoeba histolytica HM-1:IMSS
Length = 822
Score = 32.3 bits (70), Expect = 4.2
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = +2
Query: 143 KVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNH---YKNKKYKPLDLRAKKTRAM 313
KV V K+SK+ + K + + +KM NLR Y KK L+ + K
Sbjct: 517 KVLRKVQKKMSKVNKLSKKNTKKAQLKVKKMMKNLRKQSKKYAQKKSAKLNKKISKINRR 576
Query: 314 RKALTKHEAKIKTRKEIRKKSL 379
+K K K + K + KK L
Sbjct: 577 KKVSKKINNKRRVNKRLNKKRL 598
>UniRef50_Q06SJ3 Cluster: Chloroplast 30S ribosomal protein S4; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S4 - Stigeoclonium helveticum (Green alga)
Length = 2922
Score = 31.9 bits (69), Expect = 5.6
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +2
Query: 158 VASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKAL-TKH 334
V S+L +++ + R Y++ QK+K+ + + YK LDL+ K + + KAL K+
Sbjct: 2235 VFSRLYELKKAKTITERKYVLIKQKLKIF--SLFSALNYKLLDLKEKGSISSSKALELKN 2292
Query: 335 EAKIKTRKEIRKKSLFPPRVYAVKA 409
+ K ++++K F ++KA
Sbjct: 2293 QIIQKISQKMKKVKTFAKFKQSLKA 2317
>UniRef50_A6G958 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 288
Score = 31.5 bits (68), Expect = 7.4
Identities = 34/136 (25%), Positives = 50/136 (36%), Gaps = 1/136 (0%)
Frame = +2
Query: 20 EENVTVKMGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKA 199
++ VT K+ K K S+ K T + AK VA K + +V +K
Sbjct: 128 KKKVTKKVAKKKASKKVAKKKAAKKVTKKKAAKKVTKKKAAKK---VAKKKAAKKVAKKK 184
Query: 200 IARVYIVYHQKMKVNLRNHYKNKKY-KPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKS 376
A+ KV + K K K KKT A +K TK + K + +KK+
Sbjct: 185 AAKKVTKKKAAKKVTKKKVAKKKTAAKKKTAAKKKTAAKKKTATKKKTATKKKTAAKKKT 244
Query: 377 LFPPRVYAVKA*IXKK 424
+ K KK
Sbjct: 245 AAKKKTATKKKAAKKK 260
>UniRef50_A4AC55 Cluster: Putative uncharacterized protein; n=1;
Congregibacter litoralis KT71|Rep: Putative
uncharacterized protein - Congregibacter litoralis KT71
Length = 220
Score = 31.5 bits (68), Expect = 7.4
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Frame = +2
Query: 134 RVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAK-KTRA 310
++ + +A + K + +A A V ++ K + K K + K KT+A
Sbjct: 91 KLVPMRADLALEARKAQAANQAAAMVEKAAARRAKAKAKTKTKAKAKTKAKAKTKAKTKA 150
Query: 311 MRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA*IXKK 424
KA TK + K+KT ++ K R A K KK
Sbjct: 151 KTKAKTKAKTKVKTPRKTAVKKAAAKRTPAKKKVAAKK 188
>UniRef50_UPI0000F1D785 Cluster: PREDICTED: similar to LOC553316
protein; n=2; Danio rerio|Rep: PREDICTED: similar to
LOC553316 protein - Danio rerio
Length = 284
Score = 31.1 bits (67), Expect = 9.7
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 173 SKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKH-EAKIK 349
SK K +A+++ + +K+N HY + + KP+ R +K + + K EA+I
Sbjct: 170 SKAECDLKHVAKLFKSIDEMVKMNRGQHY-SSEIKPISQRQEKNERVTQGEPKRLEAQIN 228
Query: 350 TRKEIRKKS 376
K+I+ K+
Sbjct: 229 IDKDIKTKT 237
>UniRef50_Q8Y3Q8 Cluster: Lmo2775 protein; n=5; Listeria|Rep:
Lmo2775 protein - Listeria monocytogenes
Length = 722
Score = 31.1 bits (67), Expect = 9.7
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = -1
Query: 250 SKIDLHLLVIHNVNTCDSFSYNTDLGQFRSNSTSNFSNP 134
SK DL + +I+ N D FSY+++ G FR T N ++P
Sbjct: 507 SKEDLRVNIIYAENNQDYFSYDSNTGDFR---TGNITDP 542
>UniRef50_Q4Y885 Cluster: Putative uncharacterized protein; n=7;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 1729
Score = 31.1 bits (67), Expect = 9.7
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +2
Query: 212 YIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRK 358
Y++ ++ +K+ +R K+ K L + KK + M+K K+ +K+KT+K
Sbjct: 288 YLMKNKILKMKIRRKEIEKEKKLLRDQKKKKKNMKKKNGKNSSKVKTKK 336
>UniRef50_A7SHI3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 1108
Score = 31.1 bits (67), Expect = 9.7
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +2
Query: 161 ASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTK 331
ASK SK RV R IA++ H ++ +RN N K +R K+RAM+K T+
Sbjct: 987 ASKKSKKRVGRPDIAQLMRAKHFGIQTEVRN--LNSKCLIFGVRKFKSRAMKKMQTR 1041
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 325,970,331
Number of Sequences: 1657284
Number of extensions: 4879544
Number of successful extensions: 16038
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 15434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15981
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19810951153
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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