Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19c21
         (198 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54YH5 Cluster: Putative uncharacterized protein; n=1; ...    32   2.1  
UniRef50_Q8A9Y9 Cluster: N-acetylglucosamine-6-phosphate deacety...    32   2.8  
UniRef50_Q7RQ81 Cluster: Putative uncharacterized protein PY0122...    31   6.5  
UniRef50_UPI0000DD7F22 Cluster: PREDICTED: hypothetical protein;...    30   8.6  
UniRef50_Q91LJ9 Cluster: ORF41; n=1; Shrimp white spot syndrome ...    30   8.6  

>UniRef50_Q54YH5 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 437

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -1

Query: 117 HRFTKISLIYWSLNEGTFRY*AEKNRYYTLILATRPRS 4
           HR+ K ++ Y++ N G       KN+YYT I+ T P S
Sbjct: 285 HRYNKFNIFYYNNNNGFL-----KNQYYTTIIRTTPYS 317


>UniRef50_Q8A9Y9 Cluster: N-acetylglucosamine-6-phosphate
           deacetylase; n=17; Bacteroidales|Rep:
           N-acetylglucosamine-6-phosphate deacetylase -
           Bacteroides thetaiotaomicron
          Length = 390

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
 Frame = +2

Query: 59  YLKVPSLRDQYIKLI----FVKRWDVRGSLHSRHGSARHCSAAGI 181
           +LK P   ++Y+ L+     +KRWD+   LH  H  A++  + GI
Sbjct: 144 FLKTPD-ENEYVPLLEHTSCIKRWDISPELHGAHDFAKYTRSKGI 187


>UniRef50_Q7RQ81 Cluster: Putative uncharacterized protein
          PY01221; n=1; Plasmodium yoelii yoelii|Rep: Putative
          uncharacterized protein PY01221 - Plasmodium yoelii
          yoelii
          Length = 29

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = +3

Query: 6  FSALWLRSKCSICSFQ 53
          FSA WLRS CS CS+Q
Sbjct: 11 FSASWLRSICSTCSYQ 26


>UniRef50_UPI0000DD7F22 Cluster: PREDICTED: hypothetical protein;
           n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
           Homo sapiens
          Length = 194

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -3

Query: 169 TAMPGRPVTGVERAPNIPSFYKNQ 98
           T  PGR   G+E AP +PS Y N+
Sbjct: 55  TGRPGRTTRGLESAPRLPSGYLNE 78


>UniRef50_Q91LJ9 Cluster: ORF41; n=1; Shrimp white spot syndrome
           virus|Rep: ORF41 - White spot syndrome virus (WSSV)
          Length = 972

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 193 FFRADPGGTAMPGRPVTGVERAPNIPSFYKNQFN 92
           + R  PGGT  P    TG +R   I  F++  FN
Sbjct: 664 YIRTPPGGTPAPEYNSTGDQRLEEIRDFFERNFN 697


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,479,430
Number of Sequences: 1657284
Number of extensions: 3707671
Number of successful extensions: 10344
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10342
length of database: 575,637,011
effective HSP length: 45
effective length of database: 501,059,231
effective search space used: 10021184620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)