Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19c21
         (198 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g18230.1 68418.m02139 transcription regulator NOT2/NOT3/NOT5 ...    27   1.3  
At3g66652.1 68416.m00776 fip1 motif-containing protein contains ...    27   1.3  
At2g03020.2 68415.m00255 heat shock protein-related Prosite PS00...    27   1.7  
At1g20150.1 68414.m02520 subtilase family protein similar to sub...    27   1.7  
At3g57770.1 68416.m06435 protein kinase, putative contains prote...    27   2.3  
At1g16820.1 68414.m02021 vacuolar ATP synthase catalytic subunit...    27   2.3  
At1g49920.1 68414.m05598 zinc finger protein-related weak simila...    25   6.9  
At1g20630.1 68414.m02581 catalase 1 identical to catalase 1 GI:2...    25   6.9  
At4g34300.1 68417.m04875 glycine-rich protein similar to auxin r...    25   9.2  
At1g69545.1 68414.m07997 leucine-rich repeat family protein cont...    25   9.2  
At1g20130.1 68414.m02518 family II extracellular lipase, putativ...    25   9.2  

>At5g18230.1 68418.m02139 transcription regulator NOT2/NOT3/NOT5
           family protein contains Pfam domain PF04153: NOT2 / NOT3
           / NOT5 family
          Length = 843

 Score = 27.5 bits (58), Expect = 1.3
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 117 GMFGARSTPVTGRPGIAVPPGS 182
           G+  A STP  GRP + VP G+
Sbjct: 306 GLHSAPSTPAGGRPSLNVPAGN 327


>At3g66652.1 68416.m00776 fip1 motif-containing protein contains
           Pfam profile PF05182: Fip1 motif
          Length = 980

 Score = 27.5 bits (58), Expect = 1.3
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 6/32 (18%)
 Frame = +2

Query: 101 IFVKRWDVRGSLHSRH------GSARHCSAAG 178
           I +KR +  G++HSRH       S RHC  AG
Sbjct: 395 ISIKRGEDSGTMHSRHRRSHEDSSKRHCGRAG 426


>At2g03020.2 68415.m00255 heat shock protein-related Prosite
           PS00430: TonB-dependent receptor proteins signature 1;
           contains some similar to Small heat shock protein,
           chloroplast precursor (SP:P30222) {Petunia hybrida}
          Length = 247

 Score = 27.1 bits (57), Expect = 1.7
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 106 CKTMGCSGLAPLPSRVGPALQ 168
           C  +GCSG    P+  GP LQ
Sbjct: 129 CTVLGCSGFREDPALTGPVLQ 149


>At1g20150.1 68414.m02520 subtilase family protein similar to
           subtilisin-type protease precursor GI:14150446 from
           [Glycine max]
          Length = 780

 Score = 27.1 bits (57), Expect = 1.7
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -3

Query: 181 DPGGTAMPGRPVTGVERAPNIPSF 110
           +P  T MP R  TG   AP+IPSF
Sbjct: 475 EPIATIMPTRSRTGHMLAPSIPSF 498


>At3g57770.1 68416.m06435 protein kinase, putative contains
          protein kinase domain, Pfam:PF00069
          Length = 269

 Score = 26.6 bits (56), Expect = 2.3
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = -2

Query: 77 MRELSDIKLKRTDTTL 30
          M  +SDIKL RTDTTL
Sbjct: 1  MAHISDIKLIRTDTTL 16


>At1g16820.1 68414.m02021 vacuolar ATP synthase catalytic
          subunit-related / V-ATPase-related / vacuolar proton
          pump-related similar to Vacuolar ATP synthase catalytic
          subunit A (V-ATPase A subunit) (Vacuolar proton pump
          alpha subunit) (V-ATPase 69 kDa subunit) (SP:O23654)
          [Arabidopsis thaliana]
          Length = 93

 Score = 26.6 bits (56), Expect = 2.3
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = -2

Query: 77 MRELSDIKLKRTDTTL 30
          M  +SDIKL RTDTTL
Sbjct: 1  MAHISDIKLIRTDTTL 16


>At1g49920.1 68414.m05598 zinc finger protein-related weak
           similarity to mudrA [Zea mays] GI:540581, MURAZC [Zea
           mays] GI:1857256; contains Pfam profiles PF03108: MuDR
           family transposase, PF04434: SWIM zinc finger
          Length = 785

 Score = 25.0 bits (52), Expect = 6.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 189 SGPIPAALQCRADP*REWSEPRTSHRF 109
           S P P  L    +P  +W EP   HRF
Sbjct: 446 SSPDPDILAVINEPGSQWKEPWAYHRF 472


>At1g20630.1 68414.m02581 catalase 1 identical to catalase 1
           GI:2511725 from [Arabidopsis thaliana]
          Length = 492

 Score = 25.0 bits (52), Expect = 6.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 135 SEPRTSHRFTKISLIYWS 82
           SEPR +H    I + YWS
Sbjct: 455 SEPRVTHEIRSIWISYWS 472


>At4g34300.1 68417.m04875 glycine-rich protein similar to auxin
           response factor 30 (GI:20145855) {Arabidopsis thaliana}
          Length = 313

 Score = 24.6 bits (51), Expect = 9.2
 Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -2

Query: 185 GRSRRHCN-AGPTRDGSGASPEHPIVLQKSV*YTGPSM 75
           G    H + AGPT +G  +   H  ++  +  +T PS+
Sbjct: 152 GSGSNHSSIAGPTHNGHSSGSNHSSIIGSTHNHTAPSL 189


>At1g69545.1 68414.m07997 leucine-rich repeat family protein
           contains Pfam PF00560: Leucine Rich Repeat domains;
           similar to disease resistance protein RPP1-WsA
           (GI:3860163)[Arabidopsis thaliana]
          Length = 703

 Score = 24.6 bits (51), Expect = 9.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 115 MGCSGLAPLPSRVGPALQCRR 177
           MGCS L  LPS +G  +   R
Sbjct: 75  MGCSSLVELPSSIGNLINLPR 95


>At1g20130.1 68414.m02518 family II extracellular lipase, putative
           contains Pfam profile PF00657: GDSL-like
           Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
          Length = 1006

 Score = 24.6 bits (51), Expect = 9.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 123 FGARSTPVTGRPGIAVPPGSALKKK 197
           +GAR   V G P +   P   LKKK
Sbjct: 335 YGARRIGVIGTPPLGCVPSQRLKKK 359


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,635,251
Number of Sequences: 28952
Number of extensions: 77789
Number of successful extensions: 212
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 212
length of database: 12,070,560
effective HSP length: 45
effective length of database: 10,767,720
effective search space used: 215354400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)