Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19c18
         (667 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    24   3.7  
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    23   6.5  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     23   8.7  

>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 329 VPNQFSEGWVEFEKKKIAKQVAVKLNNTKIG 421
           V N    G    +  KIA Q+ +K+ N K+G
Sbjct: 152 VANLEKNGEPALKDSKIAPQIVLKVGNRKVG 182


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 416 FLYCLISLRLALQ 378
           FLYCL+  RLA Q
Sbjct: 312 FLYCLLGTRLATQ 324


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 107 NGTDCEINQKNIDRTSK 157
           NGT CE+ ++ +D  +K
Sbjct: 86  NGTTCELEEEEVDLQAK 102


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,111
Number of Sequences: 2352
Number of extensions: 11719
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)