Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19c18
(667 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039713-1|AAB96725.1| 268|Caenorhabditis elegans Hypothetical ... 128 3e-30
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 32 0.32
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 31 0.73
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 28 5.2
AF016683-1|AAB66199.3| 1360|Caenorhabditis elegans Hypothetical ... 28 5.2
U97000-9|AAC47998.1| 345|Caenorhabditis elegans Seven tm recept... 28 6.8
L07144-10|AAK21437.1| 1327|Caenorhabditis elegans Hypothetical p... 28 6.8
AF016684-13|AAB66203.1| 470|Caenorhabditis elegans Hypothetical... 28 6.8
Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical p... 27 9.1
AF022984-1|AAB69953.1| 540|Caenorhabditis elegans Hypothetical ... 27 9.1
>AF039713-1|AAB96725.1| 268|Caenorhabditis elegans Hypothetical
protein F57B10.8 protein.
Length = 268
Score = 128 bits (310), Expect = 3e-30
Identities = 67/181 (37%), Positives = 107/181 (59%), Gaps = 3/181 (1%)
Frame = +2
Query: 62 KTCEMPDVETERVPENGTDCEINQKNIDRTSKFDNKLLKQKIRKRGIIFLSTIPPYMNVA 241
++ E + E E + ++ + + D F++ KQK K G++F STIPP NV
Sbjct: 39 ESIETDNNEDEAGNLDDSEIKTEESEDDEMETFEDPEQKQK--KTGVVFFSTIPPKYNVV 96
Query: 242 KIREIFSQF--GEVGRIYLQPTGKPGEKRKRVPNQ-FSEGWVEFEKKKIAKQVAVKLNNT 412
++RE F + G+VGRI+L K + P +SEGW+E +KKKIAK +A +++NT
Sbjct: 97 RMREYFEKRCPGQVGRIFLARN-----KHSKNPQYLYSEGWMELKKKKIAKAIAEQIDNT 151
Query: 413 KIGTRKKSRYYDMIWNIKYIPRFKWIHLSERLAYERAAMKQRLRAEIAQAKKEAHYLQSN 592
IG + K M+WNI+Y+ FKW+HL E+L YE+ K+R+ E+AQA++ A + +
Sbjct: 152 PIGGKNKDPVSSMLWNIRYLSGFKWVHLMEQLQYEKEVEKRRMNVEVAQARRIAAHFEEQ 211
Query: 593 V 595
+
Sbjct: 212 I 212
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 32.3 bits (70), Expect = 0.32
Identities = 20/81 (24%), Positives = 38/81 (46%)
Frame = +2
Query: 71 EMPDVETERVPENGTDCEINQKNIDRTSKFDNKLLKQKIRKRGIIFLSTIPPYMNVAKIR 250
E P+ E E + E+G E K + + +++KI + G +FL +P ++
Sbjct: 245 ETPEPEHEVIEEHGASLESRDK--------EEETVREKILETGRLFLRNLPYATKEDDLQ 296
Query: 251 EIFSQFGEVGRIYLQPTGKPG 313
+F ++GEV + + K G
Sbjct: 297 FLFKKYGEVSEVQVVIDKKTG 317
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 31.1 bits (67), Expect = 0.73
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Frame = +2
Query: 143 DRTSKFDNKLLKQKIRKRGI------IFLSTIPPYMNVAKIREIFSQFGEVGRIYLQPTG 304
DRT + +N+ L++ + +F+ +P MN +R IFS FG + + ++
Sbjct: 119 DRTKQRENRTLQKSNARASAAENALTVFVGNMPLTMNEKSVRRIFSDFGTISSVRMRNLL 178
Query: 305 KPGEK-RKRV 331
EK KRV
Sbjct: 179 PANEKLTKRV 188
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/83 (19%), Positives = 37/83 (44%)
Frame = +2
Query: 182 KIRKRGIIFLSTIPPYMNVAKIREIFSQFGEVGRIYLQPTGKPGEKRKRVPNQFSEGWVE 361
++ ++F+ + P + IFS+FG++ + + +R + ++E
Sbjct: 236 EVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEI-------VRDRRSGDSLQYAFIE 288
Query: 362 FEKKKIAKQVAVKLNNTKIGTRK 430
F+ K +Q K++N I R+
Sbjct: 289 FDNAKSCEQAFFKMDNVLIDDRR 311
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/83 (19%), Positives = 37/83 (44%)
Frame = +2
Query: 182 KIRKRGIIFLSTIPPYMNVAKIREIFSQFGEVGRIYLQPTGKPGEKRKRVPNQFSEGWVE 361
++ ++F+ + P + IFS+FG++ + + +R + ++E
Sbjct: 236 EVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEI-------VRDRRSGDSLQYAFIE 288
Query: 362 FEKKKIAKQVAVKLNNTKIGTRK 430
F+ K +Q K++N I R+
Sbjct: 289 FDNAKSCEQAFFKMDNVLIDDRR 311
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/83 (19%), Positives = 37/83 (44%)
Frame = +2
Query: 182 KIRKRGIIFLSTIPPYMNVAKIREIFSQFGEVGRIYLQPTGKPGEKRKRVPNQFSEGWVE 361
++ ++F+ + P + IFS+FG++ + + +R + ++E
Sbjct: 167 EVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEI-------VRDRRSGDSLQYAFIE 219
Query: 362 FEKKKIAKQVAVKLNNTKIGTRK 430
F+ K +Q K++N I R+
Sbjct: 220 FDNAKSCEQAFFKMDNVLIDDRR 242
>AF016683-1|AAB66199.3| 1360|Caenorhabditis elegans Hypothetical
protein K09F6.3 protein.
Length = 1360
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 317 KRKRVPNQFSEGWVEFEKKKIAKQVAVKLNNTKIGTRKKSRYYDMIWNIKY 469
KR ++ N E + EK+KIA+++A + +KK D+ + Y
Sbjct: 811 KRNKIANDDMEQGTKIEKEKIARELAAQEAQNIEAEKKKKEIKDLEAKVDY 861
>U97000-9|AAC47998.1| 345|Caenorhabditis elegans Seven tm receptor
protein 135 protein.
Length = 345
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = -3
Query: 248 VFWQRSCKGESSTKILYLVFV---FSVLIICYQI*MFCLY 138
++W + G+ I L+ F+VLIIC+ +FC Y
Sbjct: 188 MYWTKGADGQIHWNIFELISALSCFAVLIICFFTIVFCAY 227
>L07144-10|AAK21437.1| 1327|Caenorhabditis elegans Hypothetical
protein R05D3.11 protein.
Length = 1327
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +2
Query: 356 VEFEKKKI--AKQVAVKLNNTKIGTRKKSRYYDMIWNIKYIPRFKWIHLSERLAYERAAM 529
V EKK + K++ K+N +I + N+ Y F WI S R AY R M
Sbjct: 567 VASEKKSVFSLKEMIAKMNAAQIAIMV-GQPVGKEGNLDYFLTFHWIRQSHRSAYIRDFM 625
Query: 530 KQ 535
K+
Sbjct: 626 KE 627
>AF016684-13|AAB66203.1| 470|Caenorhabditis elegans Hypothetical
protein F45C12.3 protein.
Length = 470
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/83 (22%), Positives = 38/83 (45%)
Frame = +2
Query: 287 YLQPTGKPGEKRKRVPNQFSEGWVEFEKKKIAKQVAVKLNNTKIGTRKKSRYYDMIWNIK 466
YL+ G PG++ R P + ++ E E KK +++ + I T K R W +
Sbjct: 112 YLRHRGPPGQRNSRWPQEVNDLLAE-EYKKNKTPISMDFDRLSIETGKTQRQIKQ-WFWR 169
Query: 467 YIPRFKWIHLSERLAYERAAMKQ 535
+ + + +R+ E A+++
Sbjct: 170 HKAKQSTTNYQQRVTAEPYAVRK 192
>Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical
protein Y57G11C.20 protein.
Length = 649
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = +2
Query: 365 EKKKIAKQVAVKLNNTKIGTRKKSRYYDMIWNIKYIPRFKWIHLSERLAYERAAMKQRLR 544
E+ KI +V K R S Y+D+ I P + I+ +L++ER R R
Sbjct: 443 ERDKIVSKVRESEAIEKEAVRASSEYHDVALKIFQKPNDRNIYDELKLSFERI----RSR 498
Query: 545 AEIAQAKKEAHYLQ 586
+++ + + YLQ
Sbjct: 499 IKVSHFENSSDYLQ 512
>AF022984-1|AAB69953.1| 540|Caenorhabditis elegans Hypothetical
protein ZK488.6 protein.
Length = 540
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 86 ETERVPENGTDCEINQKNIDRTSKFDNKLLKQKIRKR 196
E + P+N TDC Q N RT N +K+ K+
Sbjct: 98 ENKIFPQNSTDCPYEQWNQVRTDFIPNMNFHKKLSKK 134
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,222,062
Number of Sequences: 27780
Number of extensions: 274659
Number of successful extensions: 965
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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