Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19c17
         (142 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   0.21 
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   0.21 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   2.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   2.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   2.6  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    19   3.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    19   3.5  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    19   6.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    19   6.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    19   6.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    19   6.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    19   6.0  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    19   6.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    18   8.0  

>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 0.21
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = -3

Query: 140 FFLIKTLCVCVFYLSHKMDVWQKSQPILVFFS 45
           F +++T+C+C+F    K++  + +QP+LV  S
Sbjct: 328 FLIVRTVCLCLF--GGKVND-ESTQPMLVLNS 356


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 0.21
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = -3

Query: 140 FFLIKTLCVCVFYLSHKMDVWQKSQPILVFFS 45
           F +++T+C+C+F    K++  + +QP+LV  S
Sbjct: 328 FLIVRTVCLCLF--GGKVND-ESTQPMLVLNS 356


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 75  KITTNISVFFLHYEIQL 25
           KI  NIS+ ++ Y+I L
Sbjct: 873 KINENISMLYIGYQIIL 889


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 75  KITTNISVFFLHYEIQL 25
           KI  NIS+ ++ Y+I L
Sbjct: 873 KINENISMLYIGYQIIL 889


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 91   LCDK*NTHTH 120
            LCDK  THT+
Sbjct: 997  LCDKTETHTN 1006


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = -1

Query: 109 CFIYHIKWTSGKNHNQY*CFFLTLRDS 29
           CF    KW    N+ QY    L  RDS
Sbjct: 100 CFCDPAKWIRLNNNLQYIDEVLKNRDS 126


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = -1

Query: 109 CFIYHIKWTSGKNHNQY*CFFLTLRDS 29
           CF    KW    N+ QY    L  RDS
Sbjct: 100 CFCDPAKWIRLNNNLQYIDEVLKNRDS 126


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 75  KITTNISVFFLHYEIQL 25
           KI  NIS+ ++ Y+I L
Sbjct: 640 KINENISMPYIGYQIIL 656


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 84  RLAKITTNISVFFLHYEIQL 25
           R  +I  NIS+ ++ Y+I L
Sbjct: 897 RTIEINDNISMPYIGYQILL 916


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 84  RLAKITTNISVFFLHYEIQL 25
           R  +I  NIS+ ++ Y+I L
Sbjct: 897 RTIEINDNISMPYIGYQILL 916


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 84  RLAKITTNISVFFLHYEIQL 25
           R  +I  NIS+ ++ Y+I L
Sbjct: 897 RTIEINDNISMPYIGYQILL 916


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 84  RLAKITTNISVFFLHYEIQL 25
           R  +I  NIS+ ++ Y+I L
Sbjct: 897 RTIEINDNISMPYIGYQILL 916


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory
          receptor candidate 15 protein.
          Length = 455

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 83 VWQKSQPILVFFSY 42
          ++QK  P+L+F  Y
Sbjct: 30 LYQKLYPVLMFLIY 43


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 5/15 (33%), Positives = 8/15 (53%)
 Frame = -1

Query: 112  VCFIYHIKWTSGKNH 68
            +C+ YH +W     H
Sbjct: 2013 MCYDYHGQWDKITGH 2027


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,452
Number of Sequences: 336
Number of extensions: 411
Number of successful extensions: 19
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 27
effective length of database: 113,513
effective search space used:  2156747
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)