Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19c16
         (397 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4QPS4 Cluster: IP03739p; n=3; Sophophora|Rep: IP03739p...    62   5e-09
UniRef50_Q7PGH2 Cluster: ENSANGP00000023499; n=2; Culicidae|Rep:...    56   2e-07
UniRef50_Q6API5 Cluster: Related to heterodisulfide reductase, s...    33   2.0  
UniRef50_Q5WEU8 Cluster: Putative uncharacterized protein; n=1; ...    33   2.7  
UniRef50_A6EHF0 Cluster: Cyanophycinase; n=1; Pedobacter sp. BAL...    31   6.1  
UniRef50_A5K911 Cluster: DNA repair protein rhp16, putative; n=2...    31   6.1  
UniRef50_Q9KCJ9 Cluster: BH1572 protein; n=1; Bacillus haloduran...    31   8.1  
UniRef50_A6RU96 Cluster: Predicted protein; n=1; Botryotinia fuc...    31   8.1  
UniRef50_A6QRT1 Cluster: Serine/threonine-protein kinase psk1; n...    31   8.1  

>UniRef50_Q4QPS4 Cluster: IP03739p; n=3; Sophophora|Rep: IP03739p -
           Drosophila melanogaster (Fruit fly)
          Length = 85

 Score = 61.7 bits (143), Expect = 5e-09
 Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
 Frame = +1

Query: 76  FSTM-KKYGSRNALYDKLHKGGVLVCIGLTLYGTVLLTDHFYKYFKYVRPQIQASKAAAE 252
           F+ M KK  + N L DKLH+G V  CIG+TLYGT +L   +Y Y   +RP+    K  AE
Sbjct: 13  FAAMQKKPINTNTLLDKLHRGAVYACIGVTLYGTYILGMRYYHYCTVIRPE----KQQAE 68

Query: 253 QELLSEGSSEK 285
            +LL EG+ +K
Sbjct: 69  LKLLDEGAHDK 79


>UniRef50_Q7PGH2 Cluster: ENSANGP00000023499; n=2; Culicidae|Rep:
           ENSANGP00000023499 - Anopheles gambiae str. PEST
          Length = 75

 Score = 56.4 bits (130), Expect = 2e-07
 Identities = 26/65 (40%), Positives = 42/65 (64%)
 Frame = +1

Query: 91  KYGSRNALYDKLHKGGVLVCIGLTLYGTVLLTDHFYKYFKYVRPQIQASKAAAEQELLSE 270
           K  SRN L D+LH+G V  C+GLT+YGT +L    Y+YF  ++P    ++ A E ++L  
Sbjct: 3   KRQSRNVLLDRLHRGVVYTCMGLTMYGTYMLGVRVYRYFTVIKP----ARQAEELKMLEA 58

Query: 271 GSSEK 285
           G++++
Sbjct: 59  GAAKQ 63


>UniRef50_Q6API5 Cluster: Related to heterodisulfide reductase,
           subunit A; n=12; cellular organisms|Rep: Related to
           heterodisulfide reductase, subunit A - Desulfotalea
           psychrophila
          Length = 1018

 Score = 33.1 bits (72), Expect = 2.0
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +1

Query: 61  HIFILFSTMKKYGSRNALYDKLHKGGVL 144
           +++IL+  M+ YG R ALY K  K GV+
Sbjct: 786 NVYILYREMRTYGQREALYQKARKLGVI 813


>UniRef50_Q5WEU8 Cluster: Putative uncharacterized protein; n=1;
           Bacillus clausii KSM-K16|Rep: Putative uncharacterized
           protein - Bacillus clausii (strain KSM-K16)
          Length = 162

 Score = 32.7 bits (71), Expect = 2.7
 Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
 Frame = +1

Query: 40  K*RLKIIHI-FILFSTMKKYGSRNALYDKLHKGGVLVCIGLTL-----YGTVLLTDHFYK 201
           K +++IIH+  + + +    G    L ++  +  +LVCI L++     +  ++  +H Y 
Sbjct: 19  KEKVEIIHMQHMYYFSFHNCGELMELLERHCEVEILVCIDLSVIMKDEFIRIVADNHDYH 78

Query: 202 YFKYVRPQIQASKAAAEQELLSEGSS 279
           +FK  + Q+Q  +   E+E++ E  S
Sbjct: 79  FFKQQKRQLQYVQVRLEKEMIKESES 104


>UniRef50_A6EHF0 Cluster: Cyanophycinase; n=1; Pedobacter sp.
           BAL39|Rep: Cyanophycinase - Pedobacter sp. BAL39
          Length = 269

 Score = 31.5 bits (68), Expect = 6.1
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +1

Query: 100 SRNALYDKLHKGGVLVCIGLTLYGTVLLTDHFYKYFKYVR 219
           S  A +DKL KG ++   G+ L  +V++  HF K  +Y R
Sbjct: 157 SYRATFDKLLKGNIVFEEGMGLLDSVIIDQHFVKRSRYNR 196


>UniRef50_A5K911 Cluster: DNA repair protein rhp16, putative; n=2;
           cellular organisms|Rep: DNA repair protein rhp16,
           putative - Plasmodium vivax
          Length = 1589

 Score = 31.5 bits (68), Expect = 6.1
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +1

Query: 139 VLVCIGLTLYGT-VLLTDHFYKYFKYVRPQIQASKAAAEQELLSEGSSE 282
           VL+ +G  ++GT V L +      KY+R ++  +K    +E+LSE  SE
Sbjct: 677 VLITMGKHIFGTKVELINRVLVSTKYIRQELMMAKGEVHREVLSEVQSE 725


>UniRef50_Q9KCJ9 Cluster: BH1572 protein; n=1; Bacillus
           halodurans|Rep: BH1572 protein - Bacillus halodurans
          Length = 283

 Score = 31.1 bits (67), Expect = 8.1
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +1

Query: 55  IIHIFILFSTMKKYGSRNALYDKLHKGGVLVCI-GLTLYGTVLLTDHFYKYF 207
           +  I +LF   K YG R+     L +G +++ + G+   G+ LLT  F  +F
Sbjct: 12  VCSIIVLFLVFKAYGRRSFQDVSLFQGAMIIALAGIASIGSFLLTVPFMPFF 63


>UniRef50_A6RU96 Cluster: Predicted protein; n=1; Botryotinia
           fuckeliana B05.10|Rep: Predicted protein - Botryotinia
           fuckeliana B05.10
          Length = 264

 Score = 31.1 bits (67), Expect = 8.1
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +1

Query: 169 GTVLLTDHFYKYFKYVRPQIQ-ASKAAAEQELLSEGSSEKI 288
           G V  + H Y+ FK     +Q A KAA++ E +SEG S  +
Sbjct: 67  GGVFESIHLYRQFKTCYSSVQSAEKAASQSESMSEGESANV 107


>UniRef50_A6QRT1 Cluster: Serine/threonine-protein kinase psk1; n=1;
           Ajellomyces capsulatus NAm1|Rep:
           Serine/threonine-protein kinase psk1 - Ajellomyces
           capsulatus NAm1
          Length = 1007

 Score = 31.1 bits (67), Expect = 8.1
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +1

Query: 142 LVCIGLTLYGTVLLTDHFYKYFKYVRPQIQASKAAAEQELLSEGSSEK 285
           L C+G   YGTVLL  H      Y + Q + +     ++L+ +  +E+
Sbjct: 649 LSCLGKGTYGTVLLVRHTMTGVLYAQKQFRKASLTVHRKLVEQTKTER 696


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 375,075,191
Number of Sequences: 1657284
Number of extensions: 6979511
Number of successful extensions: 15944
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15943
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16503508437
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)